RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 PANK4Q9NVE7 773 aa14.66□□□□□ -0.06
CPSF4-206ENST00000441580 TMOD4Q9NZQ9 345 aa14.66□□□□□ -0.06
CPSF4-206ENST00000441580 R3HCC1Q9Y3T6 440 aaKnown RBP14.66□□□□□ -0.06
CPSF4-206ENST00000441580 RLFQ13129 1914 aa14.66□□□□□ -0.06
CPSF4-206ENST00000441580 COL11A1P12107 1806 aaPredicted RBP14.65□□□□□ -0.06
CPSF4-206ENST00000441580 E9PMD0 336 aa14.65□□□□□ -0.06
CPSF4-206ENST00000441580 MEIS1O00470 390 aa14.65□□□□□ -0.06
CPSF4-206ENST00000441580 NFIBO00712 420 aa14.65□□□□□ -0.06
CPSF4-206ENST00000441580 EYA4O95677 639 aa14.65□□□□□ -0.06
CPSF4-206ENST00000441580 PMS1P54277 932 aaKnown RBP14.65□□□□□ -0.06
CPSF4-206ENST00000441580 SPP2Q13103 211 aa14.65□□□□□ -0.06
CPSF4-206ENST00000441580 TKFCQ3LXA3 575 aa14.65□□□□□ -0.06
CPSF4-206ENST00000441580 PCNX4Q63HM2 1172 aa14.65□□□□□ -0.06
CPSF4-206ENST00000441580 XRRA1Q6P2D8 792 aa14.65□□□□□ -0.06
CPSF4-206ENST00000441580 PPP4R3CPQ6ZMV5 832 aa14.65□□□□□ -0.06
CPSF4-206ENST00000441580 CATSPER3Q86XQ3 398 aa14.65□□□□□ -0.06
CPSF4-206ENST00000441580 SYT2Q8N9I0 419 aaPredicted RBP14.65□□□□□ -0.06
CPSF4-206ENST00000441580 TC2NQ8N9U0 490 aa14.65□□□□□ -0.06
CPSF4-206ENST00000441580 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.65□□□□□ -0.06
CPSF4-206ENST00000441580 RBM46Q8TBY0 533 aaKnown RBP14.65□□□□□ -0.06
CPSF4-206ENST00000441580 C16orf45Q96MC5 204 aaPredicted RBP14.65□□□□□ -0.06
CPSF4-206ENST00000441580 BAG1Q99933 345 aaPredicted RBP14.65□□□□□ -0.06
CPSF4-206ENST00000441580 DUSP9Q99956 384 aaKnown RBP14.65□□□□□ -0.06
CPSF4-206ENST00000441580 EIF2AK1Q9BQI3 630 aaKnown RBP14.65□□□□□ -0.06
CPSF4-206ENST00000441580 MXRA8Q9BRK3 442 aa14.65□□□□□ -0.06
CPSF4-206ENST00000441580 ZNF577Q9BSK1 485 aa14.65□□□□□ -0.06
CPSF4-206ENST00000441580 SRRTQ9BXP5 876 aaKnown RBP14.65□□□□□ -0.06
CPSF4-206ENST00000441580 SLC39A2Q9NP94 309 aa14.65□□□□□ -0.06
CPSF4-206ENST00000441580 PTPRFP10586 1907 aa14.64□□□□□ -0.07
CPSF4-206ENST00000441580 VWA5AO00534 786 aa14.64□□□□□ -0.07
CPSF4-206ENST00000441580 TEX33O43247 280 aa14.64□□□□□ -0.07
CPSF4-206ENST00000441580 ZSCAN12O43309 604 aa14.64□□□□□ -0.07
CPSF4-206ENST00000441580 TBCAO75347 108 aaKnown RBP14.64□□□□□ -0.07
CPSF4-206ENST00000441580 SPATA31C1P0DKV0 1188 aa14.64□□□□□ -0.07
CPSF4-206ENST00000441580 DNM2P50570 870 aa14.64□□□□□ -0.07
CPSF4-206ENST00000441580 NYAP1Q6ZVC0 841 aa14.64□□□□□ -0.07
CPSF4-206ENST00000441580 TMEM139Q8IV31 216 aa14.64□□□□□ -0.07
CPSF4-206ENST00000441580 RAVER2Q9HCJ3 691 aaKnown RBP14.64□□□□□ -0.07
CPSF4-206ENST00000441580 KCND2Q9NZV8 630 aa14.64□□□□□ -0.07
CPSF4-206ENST00000441580 RNF181Q9P0P0 153 aa14.64□□□□□ -0.07
CPSF4-206ENST00000441580 SMCHD1A6NHR9 2005 aa14.64□□□□□ -0.07
CPSF4-206ENST00000441580 UBE4BO95155 1302 aa14.64□□□□□ -0.07
CPSF4-206ENST00000441580 ZC3H4Q9UPT8 1303 aaKnown RBP14.64□□□□□ -0.07
CPSF4-206ENST00000441580 ATP2A1O14983 1001 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 TNNT1P13805 278 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 GAP43P17677 238 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 FECHP22830 423 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 EPS15P42566 896 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 MTIF2P46199 727 aaKnown RBP14.63□□□□□ -0.07
CPSF4-206ENST00000441580 UBXN1Q04323 297 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 EPHA7Q15375 998 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 PTPN14Q15678 1187 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 SH3D19Q5HYK7 790 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 FKBP15Q5T1M5 1219 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 E4F1Q66K89 784 aaPredicted RBP14.63□□□□□ -0.07
CPSF4-206ENST00000441580 ANKRD40Q6AI12 368 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 OTOP1Q7RTM1 612 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 IRF2BP1Q8IU81 584 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 SULF1Q8IWU6 871 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 CPXCR1Q8N123 301 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 RETREG2Q8NC44 543 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 SYTL5Q8TDW5 730 aaPredicted RBP14.63□□□□□ -0.07
CPSF4-206ENST00000441580 TBC1D5Q92609 795 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 ZKSCAN4Q969J2 545 aaPredicted RBP14.63□□□□□ -0.07
CPSF4-206ENST00000441580 ATG4CQ96DT6 458 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 PPP1R13BQ96KQ4 1090 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 CEP63Q96MT8 703 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 VPS16Q9H269 839 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 RNF146Q9NTX7 359 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 TCEAL9Q9UHQ7 104 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 ZHX2Q9Y6X8 837 aa14.63□□□□□ -0.07
CPSF4-206ENST00000441580 IPO5O00410 1097 aaKnown RBP14.62□□□□□ -0.07
CPSF4-206ENST00000441580 GNA14O95837 355 aa14.62□□□□□ -0.07
CPSF4-206ENST00000441580 GYPCP04921 128 aa14.62□□□□□ -0.07
CPSF4-206ENST00000441580 PRKCSHP14314 528 aaPredicted RBP14.62□□□□□ -0.07
CPSF4-206ENST00000441580 DSG3P32926 999 aa14.62□□□□□ -0.07
CPSF4-206ENST00000441580 HIRAP54198 1017 aaPredicted RBP14.62□□□□□ -0.07
CPSF4-206ENST00000441580 HMGCS2P54868 508 aa14.62□□□□□ -0.07
CPSF4-206ENST00000441580 PABPC4Q13310 644 aaKnown RBP eCLIP14.62□□□□□ -0.07
CPSF4-206ENST00000441580 ZCWPW2Q504Y3 356 aa14.62□□□□□ -0.07
CPSF4-206ENST00000441580 B3GNT9Q6UX72 402 aa14.62□□□□□ -0.07
CPSF4-206ENST00000441580 RNF207Q6ZRF8 634 aa14.62□□□□□ -0.07
CPSF4-206ENST00000441580 MB21D1Q8N884 522 aa14.62□□□□□ -0.07
CPSF4-206ENST00000441580 REPS2Q8NFH8 660 aa14.62□□□□□ -0.07
CPSF4-206ENST00000441580 CYP2W1Q8TAV3 490 aa14.62□□□□□ -0.07
CPSF4-206ENST00000441580 DCPSQ96C86 337 aaKnown RBP14.62□□□□□ -0.07
CPSF4-206ENST00000441580 TRERF1Q96PN7 1200 aa14.62□□□□□ -0.07
CPSF4-206ENST00000441580 TUBGCP2Q9BSJ2 902 aa14.62□□□□□ -0.07
CPSF4-206ENST00000441580 NUP58Q9BVL2 599 aa14.62□□□□□ -0.07
CPSF4-206ENST00000441580 SEMA6BQ9H3T3 888 aa14.62□□□□□ -0.07
CPSF4-206ENST00000441580 PAXBP1Q9Y5B6 917 aa14.62□□□□□ -0.07
CPSF4-206ENST00000441580 UBIAD1Q9Y5Z9 338 aa14.62□□□□□ -0.07
CPSF4-206ENST00000441580 CHMP2AO43633 222 aa14.61□□□□□ -0.07
CPSF4-206ENST00000441580 COBLO75128 1261 aa14.61□□□□□ -0.07
CPSF4-206ENST00000441580 RPS6P62753 249 aaKnown RBP14.61□□□□□ -0.07
CPSF4-206ENST00000441580 UBXN2AP68543 259 aa14.61□□□□□ -0.07
CPSF4-206ENST00000441580 CYP4A11Q02928 519 aa14.61□□□□□ -0.07
CPSF4-206ENST00000441580 MAN2A1Q16706 1144 aa14.61□□□□□ -0.07
CPSF4-206ENST00000441580 EDRF1Q3B7T1 1238 aa14.61□□□□□ -0.07
CPSF4-206ENST00000441580 HERC4Q5GLZ8 1057 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms