RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 NEUROG2Q9H2A3 272 aa22.29■■□□□ 1.16
SHOX2-203ENST00000441443 TCP11L1Q9NUJ3 509 aa22.29■■□□□ 1.16
SHOX2-203ENST00000441443 NEBLO76041 1014 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 FLT3P36888 993 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 USP38Q8NB14 1042 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 TBC1D31Q96DN5 1066 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 IQCDQ96DY2 449 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 PCDHA6Q9UN73 950 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 PCDHA8Q9Y5H6 950 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 BAZ2AQ9UIF9 1905 aaKnown RBP22.28■■□□□ 1.16
SHOX2-203ENST00000441443 TNNC1P63316 161 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 UBE4AQ14139 1066 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 MEI1Q5TIA1 1274 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 STAG2Q8N3U4 1231 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 ZNF384Q8TF68 577 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 DOCK2Q92608 1830 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 KCNK3O14649 394 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 TLR2O60603 784 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 CENPPQ6IPU0 288 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 CHADLQ6NUI6 762 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 CNNM4Q6P4Q7 775 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 TXNRD3Q86VQ6 643 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 AMIGO3Q86WK7 504 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 SLC24A3Q9HC58 644 aa22.28■■□□□ 1.16
SHOX2-203ENST00000441443 CYP2D6P10635 497 aa22.27■■□□□ 1.16
SHOX2-203ENST00000441443 CLEC4GQ6UXB4 293 aa22.27■■□□□ 1.16
SHOX2-203ENST00000441443 DYMQ7RTS9 669 aa22.27■■□□□ 1.16
SHOX2-203ENST00000441443 CPLX4Q7Z7G2 160 aa22.27■■□□□ 1.16
SHOX2-203ENST00000441443 TBC1D5Q92609 795 aa22.27■■□□□ 1.16
SHOX2-203ENST00000441443 C7orf25Q9BPX7 421 aa22.27■■□□□ 1.16
SHOX2-203ENST00000441443 AP1M1Q9BXS5 423 aa22.27■■□□□ 1.16
SHOX2-203ENST00000441443 ISCUQ9H1K1 167 aa22.27■■□□□ 1.16
SHOX2-203ENST00000441443 LRRC4CQ9HCJ2 640 aa22.27■■□□□ 1.16
SHOX2-203ENST00000441443 DUOX1Q9NRD9 1551 aa22.27■■□□□ 1.16
SHOX2-203ENST00000441443 GRID2IPA4D2P6 1211 aa22.27■■□□□ 1.16
SHOX2-203ENST00000441443 SRRM3A6NNA2 597 aaPredicted RBP22.27■■□□□ 1.16
SHOX2-203ENST00000441443 PPP2R2AP63151 447 aa22.27■■□□□ 1.16
SHOX2-203ENST00000441443 NAB2Q15742 525 aa22.27■■□□□ 1.16
SHOX2-203ENST00000441443 HVCN1Q96D96 273 aa22.27■■□□□ 1.16
SHOX2-203ENST00000441443 FAXDC2Q96IV6 333 aa22.27■■□□□ 1.16
SHOX2-203ENST00000441443 GPR101Q96P66 508 aaPredicted RBP22.27■■□□□ 1.16
SHOX2-203ENST00000441443 EP400Q96L91 3159 aa22.27■■□□□ 1.15
SHOX2-203ENST00000441443 TECP42680 631 aa22.26■■□□□ 1.15
SHOX2-203ENST00000441443 MRPL12P52815 198 aaKnown RBP22.26■■□□□ 1.15
SHOX2-203ENST00000441443 MAGOHP61326 146 aaKnown RBP22.26■■□□□ 1.15
SHOX2-203ENST00000441443 KCNMA1Q12791 1236 aa22.26■■□□□ 1.15
SHOX2-203ENST00000441443 KIAA0753Q2KHM9 967 aa22.26■■□□□ 1.15
SHOX2-203ENST00000441443 SLC9C1Q4G0N8 1177 aa22.26■■□□□ 1.15
SHOX2-203ENST00000441443 MAGOHBQ96A72 148 aaKnown RBP22.26■■□□□ 1.15
SHOX2-203ENST00000441443 FBXL5Q9UKA1 691 aa22.26■■□□□ 1.15
SHOX2-203ENST00000441443 SSU72P8A0A1W2PR75 194 aa22.26■■□□□ 1.15
SHOX2-203ENST00000441443 MECOMQ03112 1051 aa22.26■■□□□ 1.15
SHOX2-203ENST00000441443 LRIG3Q6UXM1 1119 aa22.26■■□□□ 1.15
SHOX2-203ENST00000441443 COL1A1P02452 1464 aaPredicted RBP22.26■■□□□ 1.15
SHOX2-203ENST00000441443 CLSTN1O94985 981 aa22.25■■□□□ 1.15
SHOX2-203ENST00000441443 LRRC41Q15345 812 aa22.25■■□□□ 1.15
SHOX2-203ENST00000441443 SF3B3Q15393 1217 aaKnown RBP22.25■■□□□ 1.15
SHOX2-203ENST00000441443 ACCSLQ4AC99 568 aa22.25■■□□□ 1.15
SHOX2-203ENST00000441443 HEATR3Q7Z4Q2 680 aa22.25■■□□□ 1.15
SHOX2-203ENST00000441443 DNAAF5Q86Y56 855 aa22.25■■□□□ 1.15
SHOX2-203ENST00000441443 CCDC50Q8IVM0 306 aa22.25■■□□□ 1.15
SHOX2-203ENST00000441443 MDM1Q8TC05 714 aa22.25■■□□□ 1.15
SHOX2-203ENST00000441443 KANSL2Q9H9L4 492 aa22.25■■□□□ 1.15
SHOX2-203ENST00000441443 BAIAP2L1Q9UHR4 511 aa22.25■■□□□ 1.15
SHOX2-203ENST00000441443 LETM2Q2VYF4 491 aa22.25■■□□□ 1.15
SHOX2-203ENST00000441443 TEX11Q8IYF3 940 aa22.25■■□□□ 1.15
SHOX2-203ENST00000441443 GLIS3Q8NEA6 775 aa22.25■■□□□ 1.15
SHOX2-203ENST00000441443 ZNF622Q969S3 477 aaKnown RBP eCLIP22.25■■□□□ 1.15
SHOX2-203ENST00000441443 ADAMTS1Q9UHI8 967 aa22.25■■□□□ 1.15
SHOX2-203ENST00000441443 TMCO5BA8MYB1 307 aa22.25■■□□□ 1.15
SHOX2-203ENST00000441443 HIBADHP31937 336 aaKnown RBP22.25■■□□□ 1.15
SHOX2-203ENST00000441443 NAA25Q14CX7 972 aa22.25■■□□□ 1.15
SHOX2-203ENST00000441443 GKAP1Q5VSY0 366 aaPredicted RBP22.25■■□□□ 1.15
SHOX2-203ENST00000441443 ANKIB1Q9P2G1 1089 aa22.25■■□□□ 1.15
SHOX2-203ENST00000441443 CCNL1Q9UK58 526 aaPredicted RBP22.25■■□□□ 1.15
SHOX2-203ENST00000441443 A0A087X0T9 212 aa22.24■■□□□ 1.15
SHOX2-203ENST00000441443 M0R2N6 131 aa22.24■■□□□ 1.15
SHOX2-203ENST00000441443 FAM228BP0C875 321 aa22.24■■□□□ 1.15
SHOX2-203ENST00000441443 MYBP10242 640 aa22.24■■□□□ 1.15
SHOX2-203ENST00000441443 GBP2P32456 591 aaPredicted RBP22.24■■□□□ 1.15
SHOX2-203ENST00000441443 POLR2FP61218 127 aaKnown RBP22.24■■□□□ 1.15
SHOX2-203ENST00000441443 SFMBT2Q5VUG0 894 aa22.24■■□□□ 1.15
SHOX2-203ENST00000441443 BARGINQ6ZT62 677 aa22.24■■□□□ 1.15
SHOX2-203ENST00000441443 TAF4BQ92750 862 aa22.24■■□□□ 1.15
SHOX2-203ENST00000441443 TATDN2Q93075 761 aa22.24■■□□□ 1.15
SHOX2-203ENST00000441443 ZNF804BA4D1E1 1349 aa22.24■■□□□ 1.15
SHOX2-203ENST00000441443 TSPY2A6NKD2 308 aa22.24■■□□□ 1.15
SHOX2-203ENST00000441443 CEP104O60308 925 aa22.24■■□□□ 1.15
SHOX2-203ENST00000441443 CCNT1O60563 726 aaKnown RBP22.24■■□□□ 1.15
SHOX2-203ENST00000441443 SKAP2O75563 359 aaPredicted RBP22.24■■□□□ 1.15
SHOX2-203ENST00000441443 XRCC4Q13426 336 aa22.24■■□□□ 1.15
SHOX2-203ENST00000441443 HIBCHQ6NVY1 386 aaPredicted RBP22.24■■□□□ 1.15
SHOX2-203ENST00000441443 RUFY4Q6ZNE9 571 aa22.24■■□□□ 1.15
SHOX2-203ENST00000441443 LRRC45Q96CN5 670 aa22.24■■□□□ 1.15
SHOX2-203ENST00000441443 DDX47Q9H0S4 455 aaKnown RBP22.24■■□□□ 1.15
SHOX2-203ENST00000441443 CUEDC2Q9H467 287 aa22.24■■□□□ 1.15
SHOX2-203ENST00000441443 RBAK-RBAKDNI3L0D1 243 aa22.23■■□□□ 1.15
SHOX2-203ENST00000441443 SEMA3FQ13275 785 aa22.23■■□□□ 1.15
SHOX2-203ENST00000441443 FAM83BQ5T0W9 1011 aa22.23■■□□□ 1.15
SHOX2-203ENST00000441443 MSL1Q68DK7 614 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms