RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 FAM26DQ5JW98 314 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 CASC1Q6TDU7 716 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 RUFY2Q8WXA3 655 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 TBC1D32Q96NH3 1257 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 CCDC94Q9BW85 323 aaPredicted RBP6.92□□□□□ -1.3
PTPRR-204ENST00000440835 INCENPQ9NQS7 918 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 PI4K2BG5E9Z4 385 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 RB1P06400 928 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 CCDC173Q0VFZ6 552 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 COL19A1Q14993 1142 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 TMEM31Q5JXX7 168 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 MYSM1Q5VVJ2 828 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 SEPT14Q6ZU15 432 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 ZNF589Q86UQ0 364 aaPredicted RBP6.92□□□□□ -1.3
PTPRR-204ENST00000440835 KCTD17Q8N5Z5 321 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 ENAHQ8N8S7 591 aaPredicted RBP6.92□□□□□ -1.3
PTPRR-204ENST00000440835 SEPT8Q92599 483 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 DHX38Q92620 1227 aaKnown RBP6.92□□□□□ -1.3
PTPRR-204ENST00000440835 TNPO1Q92973 898 aaKnown RBP6.92□□□□□ -1.3
PTPRR-204ENST00000440835 CDHR1Q96JP9 859 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 PURBQ96QR8 312 aaKnown RBP6.92□□□□□ -1.3
PTPRR-204ENST00000440835 CTAGE1Q96RT6 745 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 SENP7Q9BQF6 1050 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 PDCD2LQ9BRP1 358 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 USP26Q9BXU7 913 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 RIOX1Q9H6W3 641 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.92□□□□□ -1.3
PTPRR-204ENST00000440835 SQORQ9Y6N5 450 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 NEDD4P46934 1319 aa6.92□□□□□ -1.3
PTPRR-204ENST00000440835 PALM3A6NDB9 673 aaPredicted RBP6.91□□□□□ -1.3
PTPRR-204ENST00000440835 GCOM1H8Y6P7 765 aaPredicted RBP6.91□□□□□ -1.3
PTPRR-204ENST00000440835 DYNC1I1O14576 645 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 LPXNO60711 386 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 KDM4AO75164 1064 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 POLR2MP0CAP2 368 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 ALADP13716 330 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 TRDNQ13061 729 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 SART3Q15020 963 aaKnown RBP6.91□□□□□ -1.3
PTPRR-204ENST00000440835 SKIV2LQ15477 1246 aaKnown RBP6.91□□□□□ -1.3
PTPRR-204ENST00000440835 KIAA0753Q2KHM9 967 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 USH1GQ495M9 461 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 NAALADL2Q58DX5 795 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 PLEKHG4Q58EX7 1191 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 BMP2KLQ5H9B9 411 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 AXDND1Q5T1B0 1012 aaPredicted RBP6.91□□□□□ -1.3
PTPRR-204ENST00000440835 TMEM63BQ5T3F8 832 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 IFIT1BQ5T764 474 aaKnown RBP6.91□□□□□ -1.3
PTPRR-204ENST00000440835 MTERF4Q7Z6M4 381 aaKnown RBP6.91□□□□□ -1.3
PTPRR-204ENST00000440835 ARNTL2Q8WYA1 636 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 MRPL38Q96DV4 380 aaKnown RBP6.91□□□□□ -1.3
PTPRR-204ENST00000440835 CHMP5Q9NZZ3 219 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 HDAC6Q9UBN7 1215 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 ZNF215Q9UL58 517 aaPredicted RBP6.91□□□□□ -1.3
PTPRR-204ENST00000440835 MTMR7Q9Y216 660 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 NLRC5Q86WI3 1866 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 C17orf102A2RUQ5 167 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 RSPH10B2B2RC85 870 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 RSPH10BP0C881 870 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 MYOGP15173 224 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 GRM4Q14833 912 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 LY6KQ17RY6 165 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 TRAF7Q6Q0C0 670 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 FBXO22Q8NEZ5 403 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 COPS5Q92905 334 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 ZSWIM5Q9P217 1185 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 U3KPZ7 1027 aaPredicted RBP6.91□□□□□ -1.3
PTPRR-204ENST00000440835 COL6A3P12111 3177 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 PNMA6FA0A0J9YX94 578 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 ERICH2A1L162 156 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 LINC01553A4QN01 128 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 KLRF2D3W0D1 207 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 NBNO60934 754 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 MSNP26038 577 aaKnown RBP6.91□□□□□ -1.3
PTPRR-204ENST00000440835 GNAQP50148 359 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 GPNMBQ14956 572 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 PGM5Q15124 567 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 SEC23AQ15436 765 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 METTL7BQ6UX53 244 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 RASGRP2Q7LDG7 609 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 PLEKHM2Q8IWE5 1019 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 RILPL2Q969X0 211 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 SPATA33Q96N06 139 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 UBE2ZQ9H832 354 aaPredicted RBP6.91□□□□□ -1.3
PTPRR-204ENST00000440835 COL20A1Q9P218 1284 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 KCNG1Q9UIX4 513 aa6.91□□□□□ -1.3
PTPRR-204ENST00000440835 DDX11L8A8MPP1 907 aa6.9□□□□□ -1.3
PTPRR-204ENST00000440835 PRR33A8MZF0 331 aa6.9□□□□□ -1.3
PTPRR-204ENST00000440835 PIK3CDO00329 1044 aa6.9□□□□□ -1.3
PTPRR-204ENST00000440835 FIBPO43427 364 aa6.9□□□□□ -1.3
PTPRR-204ENST00000440835 DHX16O60231 1041 aaKnown RBP6.9□□□□□ -1.3
PTPRR-204ENST00000440835 HAND2P61296 217 aa6.9□□□□□ -1.3
PTPRR-204ENST00000440835 TAF2Q6P1X5 1199 aa6.9□□□□□ -1.3
PTPRR-204ENST00000440835 RSPH3Q86UC2 560 aa6.9□□□□□ -1.3
PTPRR-204ENST00000440835 NLRX1Q86UT6 975 aa6.9□□□□□ -1.3
PTPRR-204ENST00000440835 TMTC2Q8N394 836 aa6.9□□□□□ -1.3
PTPRR-204ENST00000440835 MICALL1Q8N3F8 863 aa6.9□□□□□ -1.3
PTPRR-204ENST00000440835 PLVAPQ9BX97 442 aa6.9□□□□□ -1.3
PTPRR-204ENST00000440835 UPF3BQ9BZI7 483 aaKnown RBP6.9□□□□□ -1.3
PTPRR-204ENST00000440835 UBA5Q9GZZ9 404 aa6.9□□□□□ -1.3
PTPRR-204ENST00000440835 PCDHA1Q9Y5I3 950 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms