RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 CATSPER3Q86XQ3 398 aa12.85□□□□□ -0.35
SMPD4P2-201ENST00000440167 NSUN6Q8TEA1 469 aaKnown RBP12.85□□□□□ -0.35
SMPD4P2-201ENST00000440167 GSDMAQ96QA5 445 aa12.85□□□□□ -0.35
SMPD4P2-201ENST00000440167 BPIFA3Q9BQP9 254 aa12.85□□□□□ -0.35
SMPD4P2-201ENST00000440167 TEKT3Q9BXF9 490 aa12.85□□□□□ -0.35
SMPD4P2-201ENST00000440167 AGO4Q9HCK5 861 aaKnown RBP12.85□□□□□ -0.35
SMPD4P2-201ENST00000440167 JADE2Q9NQC1 790 aa12.85□□□□□ -0.35
SMPD4P2-201ENST00000440167 FBXO40Q9UH90 709 aa12.85□□□□□ -0.35
SMPD4P2-201ENST00000440167 PNMA3Q9UL41 463 aa12.85□□□□□ -0.35
SMPD4P2-201ENST00000440167 ASTN1O14525 1302 aa12.85□□□□□ -0.35
SMPD4P2-201ENST00000440167 KLRC4O43908 158 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 SPATA31C1P0DKV0 1188 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 ZBTB48P10074 688 aaPredicted RBP12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 ITGB3BPQ13352 177 aaPredicted RBP12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 PPP2R5CQ13362 524 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 VSIG10LQ86VR7 867 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 C7orf25Q9BPX7 421 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 EIF2AK1Q9BQI3 630 aaKnown RBP12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 TRIM9Q9C026 710 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 NT5C3AQ9H0P0 336 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 PFASO15067 1338 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 ARID2Q68CP9 1835 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 MYMKA6NI61 221 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 SLC25A27O95847 323 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 SSBP05455 408 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 PSMC6P62333 389 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 ERVK-9P63128 1117 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 ERVK-24P63145 666 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 ASIC1P78348 528 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 FSTL1Q12841 308 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 CTTNQ14247 550 aaKnown RBP12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 KMT5BQ4FZB7 885 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 WDR78Q5VTH9 848 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 DYMQ7RTS9 669 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 ANKRD23Q86SG2 305 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 RASAL3Q86YV0 1011 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 SMCR8Q8TEV9 937 aaPredicted RBP12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 DYDC2Q96IM9 177 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 PDLIM2Q96JY6 352 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 RGL1Q9NZL6 768 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 GDAQ9Y2T3 454 aa12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 MYH9P35579 1960 aaKnown RBP12.84□□□□□ -0.35
SMPD4P2-201ENST00000440167 POTEB2H3BUK9 544 aa12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 DHX15O43143 795 aaKnown RBP12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 ATP9AO75110 1047 aa12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 ADCY5O95622 1261 aa12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 MYL1P05976 194 aa12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 RPA1P27694 616 aa12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 CLCN1P35523 988 aa12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 ALDH5A1P51649 535 aaPredicted RBP12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 ZNF157P51786 506 aaPredicted RBP12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 AMPD3Q01432 767 aa12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 SEMA3FQ13275 785 aa12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 NCAPHQ15003 741 aa12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 HS1BP3Q53T59 392 aa12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 TRMT44Q8IYL2 757 aaKnown RBP12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 MLKLQ8NB16 471 aa12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 RIT2Q99578 217 aa12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 PTPN18Q99952 460 aa12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 POLR3CQ9BUI4 534 aaPredicted RBP12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 RMND1Q9NWS8 449 aa12.83□□□□□ -0.36
SMPD4P2-201ENST00000440167 SOWAHBA6NEL2 793 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 SMTNL1A8MU46 457 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 PPP1R3GB7ZBB8 358 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 SLC26A4O43511 780 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 RGS20O76081 388 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 PGK2P07205 417 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 PLA2G4BP0C869 781 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 KLHL10Q6JEL2 608 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 XRRA1Q6P2D8 792 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 B3GNT9Q6UX72 402 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 NLRX1Q86UT6 975 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 ANKRD13CQ8N6S4 541 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 MMP19Q99542 508 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 MAF1Q9H063 256 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 PORCNQ9H237 461 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 EFCC1Q9HA90 598 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 DACH1Q9UI36 760 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 SLC45A1Q9Y2W3 748 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 STK24Q9Y6E0 443 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 PASKQ96RG2 1323 aa12.82□□□□□ -0.36
SMPD4P2-201ENST00000440167 NPHP3-ACAD11A0A0J9YXS1 232 aa12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 SORBS3O60504 671 aa12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 COBLO75128 1261 aa12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 COPB2P35606 906 aa12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 STX17P56962 302 aa12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 MYL5Q02045 173 aa12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 PDE4DQ08499 809 aa12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 KCNB1Q14721 858 aa12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 ZNF658Q5TYW1 1059 aaPredicted RBP12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 MIER3Q7Z3K6 550 aa12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 GPBP1Q86WP2 473 aa12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 TPH2Q8IWU9 490 aa12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 BANK1Q8NDB2 785 aa12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 DNERQ8NFT8 737 aa12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 DDX12PQ92771 950 aa12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 HPS3Q969F9 1004 aa12.81□□□□□ -0.36
SMPD4P2-201ENST00000440167 GPRASP2Q96D09 838 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms