RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 LRRC8DQ7L1W4 858 aa22.75■■□□□ 1.23
SHROOM1-204ENST00000440118 MYLIPQ8WY64 445 aa22.75■■□□□ 1.23
SHROOM1-204ENST00000440118 KCNB2Q92953 911 aa22.75■■□□□ 1.23
SHROOM1-204ENST00000440118 GPRASP2Q96D09 838 aa22.75■■□□□ 1.23
SHROOM1-204ENST00000440118 USP26Q9BXU7 913 aa22.75■■□□□ 1.23
SHROOM1-204ENST00000440118 TUT1Q9H6E5 874 aaKnown RBP22.75■■□□□ 1.23
SHROOM1-204ENST00000440118 PKD2L1Q9P0L9 805 aa22.75■■□□□ 1.23
SHROOM1-204ENST00000440118 PCDHA6Q9UN73 950 aa22.75■■□□□ 1.23
SHROOM1-204ENST00000440118 PCDHA8Q9Y5H6 950 aa22.75■■□□□ 1.23
SHROOM1-204ENST00000440118 HAS3O00219 553 aa22.74■■□□□ 1.23
SHROOM1-204ENST00000440118 RPS6KB1P23443 525 aa22.74■■□□□ 1.23
SHROOM1-204ENST00000440118 SEMA3FQ13275 785 aa22.74■■□□□ 1.23
SHROOM1-204ENST00000440118 MTMR1Q13613 665 aa22.74■■□□□ 1.23
SHROOM1-204ENST00000440118 UTP14CQ5TAP6 766 aaKnown RBP22.74■■□□□ 1.23
SHROOM1-204ENST00000440118 ZNF576Q9H609 170 aa22.74■■□□□ 1.23
SHROOM1-204ENST00000440118 PPP4R2Q9NY27 417 aa22.74■■□□□ 1.23
SHROOM1-204ENST00000440118 TET1Q8NFU7 2136 aa22.73■■□□□ 1.23
SHROOM1-204ENST00000440118 C17orf102A2RUQ5 167 aa22.73■■□□□ 1.23
SHROOM1-204ENST00000440118 ATP2A2P16615 1042 aaKnown RBP22.73■■□□□ 1.23
SHROOM1-204ENST00000440118 CDC27P30260 824 aa22.73■■□□□ 1.23
SHROOM1-204ENST00000440118 AKAP17AQ02040 695 aaKnown RBP22.73■■□□□ 1.23
SHROOM1-204ENST00000440118 PTK7Q13308 1070 aa22.73■■□□□ 1.23
SHROOM1-204ENST00000440118 GPR20Q99678 358 aa22.73■■□□□ 1.23
SHROOM1-204ENST00000440118 SENP7Q9BQF6 1050 aa22.73■■□□□ 1.23
SHROOM1-204ENST00000440118 C16orf70Q9BSU1 422 aa22.73■■□□□ 1.23
SHROOM1-204ENST00000440118 GLT8D2Q9H1C3 349 aa22.73■■□□□ 1.23
SHROOM1-204ENST00000440118 BCAS3Q9H6U6 928 aa22.73■■□□□ 1.23
SHROOM1-204ENST00000440118 RIC8AQ9NPQ8 531 aa22.73■■□□□ 1.23
SHROOM1-204ENST00000440118 SMCO2A6NFE2 343 aa22.72■■□□□ 1.23
SHROOM1-204ENST00000440118 STXBP3O00186 592 aa22.72■■□□□ 1.23
SHROOM1-204ENST00000440118 KCNJ6P48051 423 aa22.72■■□□□ 1.23
SHROOM1-204ENST00000440118 SLC28A3Q9HAS3 691 aa22.72■■□□□ 1.23
SHROOM1-204ENST00000440118 BARHL2Q9NY43 387 aa22.72■■□□□ 1.23
SHROOM1-204ENST00000440118 PARNO95453 639 aaKnown RBP22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 FOSP01100 380 aaPredicted RBP22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 SMIM10L2AP0DMW4 78 aa22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 SMIM10L2BP0DMW5 78 aa22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 CKBP12277 381 aa22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 ADD1P35611 737 aaKnown RBP22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 ZNF200P98182 395 aaPredicted RBP22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 FUT2Q10981 343 aa22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 TRIM50Q86XT4 487 aa22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 TEX2Q8IWB9 1127 aa22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 MAFAQ8NHW3 353 aaPredicted RBP22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 CCDC12Q8WUD4 166 aaPredicted RBP22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 DHX38Q92620 1227 aaKnown RBP22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 ATP6V0A1Q93050 837 aa22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 PGBD1Q96JS3 809 aa22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 CTAGE1Q96RT6 745 aa22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 ANO3Q9BYT9 981 aa22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 NKX2-4Q9H2Z4 354 aa22.71■■□□□ 1.23
SHROOM1-204ENST00000440118 CDH23Q9H251 3354 aa22.7■■□□□ 1.22
SHROOM1-204ENST00000440118 GNAT1P11488 350 aa22.7■■□□□ 1.22
SHROOM1-204ENST00000440118 ITGB5P18084 799 aa22.7■■□□□ 1.22
SHROOM1-204ENST00000440118 RABGGTBP53611 331 aa22.7■■□□□ 1.22
SHROOM1-204ENST00000440118 GRIN2CQ14957 1233 aa22.7■■□□□ 1.22
SHROOM1-204ENST00000440118 TYW1BQ6NUM6 668 aa22.7■■□□□ 1.22
SHROOM1-204ENST00000440118 SLC9A7Q96T83 725 aa22.7■■□□□ 1.22
SHROOM1-204ENST00000440118 UBIAD1Q9Y5Z9 338 aa22.7■■□□□ 1.22
SHROOM1-204ENST00000440118 EPB41L2O43491 1005 aaKnown RBP22.69■■□□□ 1.22
SHROOM1-204ENST00000440118 BAIAP3O94812 1187 aa22.69■■□□□ 1.22
SHROOM1-204ENST00000440118 SCG2P13521 617 aa22.69■■□□□ 1.22
SHROOM1-204ENST00000440118 TCF7P36402 384 aaPredicted RBP22.69■■□□□ 1.22
SHROOM1-204ENST00000440118 ZNF76P36508 570 aa22.69■■□□□ 1.22
SHROOM1-204ENST00000440118 THPOP40225 353 aa22.69■■□□□ 1.22
SHROOM1-204ENST00000440118 AP3B2Q13367 1082 aa22.69■■□□□ 1.22
SHROOM1-204ENST00000440118 PFKFB3Q16875 520 aaPredicted RBP22.69■■□□□ 1.22
SHROOM1-204ENST00000440118 PPP2R2DQ66LE6 453 aa22.69■■□□□ 1.22
SHROOM1-204ENST00000440118 GAS2L1Q99501 681 aaPredicted RBP22.69■■□□□ 1.22
SHROOM1-204ENST00000440118 JADE2Q9NQC1 790 aa22.69■■□□□ 1.22
SHROOM1-204ENST00000440118 FAM217BQ9NTX9 383 aaPredicted RBP22.69■■□□□ 1.22
SHROOM1-204ENST00000440118 CYP46A1Q9Y6A2 500 aa22.69■■□□□ 1.22
SHROOM1-204ENST00000440118 KCNA2P16389 499 aa22.68■■□□□ 1.22
SHROOM1-204ENST00000440118 RBL2Q08999 1139 aa22.68■■□□□ 1.22
SHROOM1-204ENST00000440118 GLG1Q92896 1179 aa22.68■■□□□ 1.22
SHROOM1-204ENST00000440118 VWCEQ96DN2 955 aa22.68■■□□□ 1.22
SHROOM1-204ENST00000440118 SDF4Q9BRK5 362 aa22.68■■□□□ 1.22
SHROOM1-204ENST00000440118 JPH1Q9HDC5 661 aaPredicted RBP22.68■■□□□ 1.22
SHROOM1-204ENST00000440118 PCDHA11Q9Y5I1 949 aa22.68■■□□□ 1.22
SHROOM1-204ENST00000440118 NID2Q14112 1375 aa22.67■■□□□ 1.22
SHROOM1-204ENST00000440118 MAFGO15525 162 aa22.67■■□□□ 1.22
SHROOM1-204ENST00000440118 ATP9AO75110 1047 aa22.67■■□□□ 1.22
SHROOM1-204ENST00000440118 ARHGAP4P98171 946 aa22.67■■□□□ 1.22
SHROOM1-204ENST00000440118 ZNF618Q5T7W0 954 aa22.67■■□□□ 1.22
SHROOM1-204ENST00000440118 ERICH6BQ5W0A0 696 aa22.67■■□□□ 1.22
SHROOM1-204ENST00000440118 RUFY3Q7L099 469 aa22.67■■□□□ 1.22
SHROOM1-204ENST00000440118 SERINC5Q86VE9 423 aa22.67■■□□□ 1.22
SHROOM1-204ENST00000440118 PHKBQ93100 1093 aa22.67■■□□□ 1.22
SHROOM1-204ENST00000440118 C6orf50Q9HD87 102 aa22.67■■□□□ 1.22
SHROOM1-204ENST00000440118 TMEM260Q9NX78 707 aa22.67■■□□□ 1.22
SHROOM1-204ENST00000440118 YBX2Q9Y2T7 364 aaKnown RBP22.67■■□□□ 1.22
SHROOM1-204ENST00000440118 EMSYQ7Z589 1322 aa22.66■■□□□ 1.22
SHROOM1-204ENST00000440118 KIF28PB7ZC32 967 aa22.66■■□□□ 1.22
SHROOM1-204ENST00000440118 CCT2P78371 535 aaKnown RBP22.66■■□□□ 1.22
SHROOM1-204ENST00000440118 JAKMIP3Q5VZ66 844 aa22.66■■□□□ 1.22
SHROOM1-204ENST00000440118 CNKSR3Q6P9H4 555 aa22.66■■□□□ 1.22
SHROOM1-204ENST00000440118 REXO1Q8N1G1 1221 aaKnown RBP22.66■■□□□ 1.22
SHROOM1-204ENST00000440118 FBXL16Q8N461 479 aa22.66■■□□□ 1.22
SHROOM1-204ENST00000440118 CCDC148Q8NFR7 591 aa22.66■■□□□ 1.22
SHROOM1-204ENST00000440118 SEPT1Q8WYJ6 367 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms