RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 SPZ1Q9BXG8 430 aa18.48■□□□□ 0.55
ITGB1-207ENST00000439974 FAM217BQ9NTX9 383 aaPredicted RBP18.48■□□□□ 0.55
ITGB1-207ENST00000439974 PDRG1Q9NUG6 133 aa18.48■□□□□ 0.55
ITGB1-207ENST00000439974 SPTBN5Q9NRC6 3674 aaKnown RBP18.48■□□□□ 0.55
ITGB1-207ENST00000439974 FRMPD4Q14CM0 1322 aa18.48■□□□□ 0.55
ITGB1-207ENST00000439974 SORBS3O60504 671 aa18.47■□□□□ 0.55
ITGB1-207ENST00000439974 ADD1P35611 737 aaKnown RBP18.47■□□□□ 0.55
ITGB1-207ENST00000439974 SP2Q02086 613 aa18.47■□□□□ 0.55
ITGB1-207ENST00000439974 PTK7Q13308 1070 aa18.47■□□□□ 0.55
ITGB1-207ENST00000439974 GNPTABQ3T906 1256 aa18.47■□□□□ 0.55
ITGB1-207ENST00000439974 SYMPKQ92797 1274 aaKnown RBP18.47■□□□□ 0.55
ITGB1-207ENST00000439974 RRP36Q96EU6 259 aaKnown RBP18.47■□□□□ 0.55
ITGB1-207ENST00000439974 ZFP91Q96JP5 570 aaPredicted RBP18.47■□□□□ 0.55
ITGB1-207ENST00000439974 TM6SF1Q9BZW5 370 aa18.47■□□□□ 0.55
ITGB1-207ENST00000439974 MLXIPQ9HAP2 919 aa18.47■□□□□ 0.55
ITGB1-207ENST00000439974 KIF28PB7ZC32 967 aa18.46■□□□□ 0.55
ITGB1-207ENST00000439974 STAM2O75886 525 aa18.46■□□□□ 0.55
ITGB1-207ENST00000439974 CA3P07451 260 aa18.46■□□□□ 0.55
ITGB1-207ENST00000439974 CKBP12277 381 aa18.46■□□□□ 0.55
ITGB1-207ENST00000439974 SMARCA1P28370 1054 aa18.46■□□□□ 0.55
ITGB1-207ENST00000439974 KCNJ6P48051 423 aa18.46■□□□□ 0.55
ITGB1-207ENST00000439974 GNAQP50148 359 aa18.46■□□□□ 0.55
ITGB1-207ENST00000439974 METAP2P50579 478 aaKnown RBP eCLIP18.46■□□□□ 0.55
ITGB1-207ENST00000439974 CCT2P78371 535 aaKnown RBP18.46■□□□□ 0.55
ITGB1-207ENST00000439974 HERC6Q8IVU3 1022 aa18.46■□□□□ 0.55
ITGB1-207ENST00000439974 GPKOWQ92917 476 aaPredicted RBP eCLIP18.46■□□□□ 0.55
ITGB1-207ENST00000439974 LZTS2Q9BRK4 669 aa18.46■□□□□ 0.55
ITGB1-207ENST00000439974 NCOA5Q9HCD5 579 aaKnown RBP18.46■□□□□ 0.55
ITGB1-207ENST00000439974 PRDM6Q9NQX0 595 aa18.46■□□□□ 0.55
ITGB1-207ENST00000439974 TTC28Q96AY4 2481 aa18.45■□□□□ 0.54
ITGB1-207ENST00000439974 DTNBO60941 627 aa18.45■□□□□ 0.54
ITGB1-207ENST00000439974 ICAM3P32942 547 aa18.45■□□□□ 0.54
ITGB1-207ENST00000439974 STK3Q13188 491 aa18.45■□□□□ 0.54
ITGB1-207ENST00000439974 GPNMBQ14956 572 aa18.45■□□□□ 0.54
ITGB1-207ENST00000439974 TJAP1Q5JTD0 557 aa18.45■□□□□ 0.54
ITGB1-207ENST00000439974 CNKSR3Q6P9H4 555 aa18.45■□□□□ 0.54
ITGB1-207ENST00000439974 CUL5Q93034 780 aa18.45■□□□□ 0.54
ITGB1-207ENST00000439974 INPP4AQ96PE3 977 aaPredicted RBP18.45■□□□□ 0.54
ITGB1-207ENST00000439974 AGXT2Q9BYV1 514 aa18.45■□□□□ 0.54
ITGB1-207ENST00000439974 SEC63Q9UGP8 760 aaKnown RBP18.45■□□□□ 0.54
ITGB1-207ENST00000439974 CNTNAP5Q8WYK1 1306 aa18.45■□□□□ 0.54
ITGB1-207ENST00000439974 CXCL10P02778 98 aa18.44■□□□□ 0.54
ITGB1-207ENST00000439974 PDIA3P30101 505 aaKnown RBP18.44■□□□□ 0.54
ITGB1-207ENST00000439974 MRPS9P82933 396 aaKnown RBP18.44■□□□□ 0.54
ITGB1-207ENST00000439974 FUT2Q10981 343 aa18.44■□□□□ 0.54
ITGB1-207ENST00000439974 NEDD9Q14511 834 aa18.44■□□□□ 0.54
ITGB1-207ENST00000439974 CCDC85BQ15834 202 aaPredicted RBP18.44■□□□□ 0.54
ITGB1-207ENST00000439974 TRIM71Q2Q1W2 868 aaKnown RBP18.44■□□□□ 0.54
ITGB1-207ENST00000439974 SMARCC2Q8TAQ2 1214 aa18.44■□□□□ 0.54
ITGB1-207ENST00000439974 C16orf70Q9BSU1 422 aa18.44■□□□□ 0.54
ITGB1-207ENST00000439974 RBM28Q9NW13 759 aaKnown RBP18.44■□□□□ 0.54
ITGB1-207ENST00000439974 THEGQ9P2T0 379 aa18.44■□□□□ 0.54
ITGB1-207ENST00000439974 PIK3CDO00329 1044 aa18.43■□□□□ 0.54
ITGB1-207ENST00000439974 NOP56O00567 594 aaKnown RBP18.43■□□□□ 0.54
ITGB1-207ENST00000439974 FIBPO43427 364 aa18.43■□□□□ 0.54
ITGB1-207ENST00000439974 NBNO60934 754 aa18.43■□□□□ 0.54
ITGB1-207ENST00000439974 ANAPC15P60006 121 aa18.43■□□□□ 0.54
ITGB1-207ENST00000439974 WDR5P61964 334 aaKnown RBP18.43■□□□□ 0.54
ITGB1-207ENST00000439974 ZNF200P98182 395 aaPredicted RBP18.43■□□□□ 0.54
ITGB1-207ENST00000439974 METTL7BQ6UX53 244 aa18.43■□□□□ 0.54
ITGB1-207ENST00000439974 ATXN2LQ8WWM7 1075 aaKnown RBP18.43■□□□□ 0.54
ITGB1-207ENST00000439974 WNT8BQ93098 351 aa18.43■□□□□ 0.54
ITGB1-207ENST00000439974 V9GY48 417 aaPredicted RBP18.43■□□□□ 0.54
ITGB1-207ENST00000439974 PTPRSQ13332 1948 aa18.43■□□□□ 0.54
ITGB1-207ENST00000439974 SPATA31C2B4DYI2 1134 aa18.42■□□□□ 0.54
ITGB1-207ENST00000439974 H3BRB1 525 aa18.42■□□□□ 0.54
ITGB1-207ENST00000439974 TLL1O43897 1013 aa18.42■□□□□ 0.54
ITGB1-207ENST00000439974 LGALS2P05162 132 aa18.42■□□□□ 0.54
ITGB1-207ENST00000439974 SEMA3FQ13275 785 aa18.42■□□□□ 0.54
ITGB1-207ENST00000439974 ZNF618Q5T7W0 954 aa18.42■□□□□ 0.54
ITGB1-207ENST00000439974 PCNX4Q63HM2 1172 aa18.42■□□□□ 0.54
ITGB1-207ENST00000439974 XRRA1Q6P2D8 792 aa18.42■□□□□ 0.54
ITGB1-207ENST00000439974 TRAF7Q6Q0C0 670 aa18.42■□□□□ 0.54
ITGB1-207ENST00000439974 USP17L6PQ6QN14 398 aa18.42■□□□□ 0.54
ITGB1-207ENST00000439974 HEATR3Q7Z4Q2 680 aa18.42■□□□□ 0.54
ITGB1-207ENST00000439974 FBXL16Q8N461 479 aa18.42■□□□□ 0.54
ITGB1-207ENST00000439974 PHKBQ93100 1093 aa18.42■□□□□ 0.54
ITGB1-207ENST00000439974 TUT1Q9H6E5 874 aaKnown RBP18.42■□□□□ 0.54
ITGB1-207ENST00000439974 RTEL1Q9NZ71 1219 aa18.42■□□□□ 0.54
ITGB1-207ENST00000439974 PRRC2BQ5JSZ5 2229 aaKnown RBP18.41■□□□□ 0.54
ITGB1-207ENST00000439974 ABHD14A-ACY1A0A1B0GW23 586 aa18.41■□□□□ 0.54
ITGB1-207ENST00000439974 C17orf102A2RUQ5 167 aa18.41■□□□□ 0.54
ITGB1-207ENST00000439974 MEIS2O14770 477 aa18.41■□□□□ 0.54
ITGB1-207ENST00000439974 AK2P54819 239 aa18.41■□□□□ 0.54
ITGB1-207ENST00000439974 TAP1Q03518 808 aa18.41■□□□□ 0.54
ITGB1-207ENST00000439974 HIC1Q14526 733 aa18.41■□□□□ 0.54
ITGB1-207ENST00000439974 CYFIP1Q7L576 1253 aa18.41■□□□□ 0.54
ITGB1-207ENST00000439974 SERINC5Q86VE9 423 aa18.41■□□□□ 0.54
ITGB1-207ENST00000439974 BCAS3Q9H6U6 928 aa18.41■□□□□ 0.54
ITGB1-207ENST00000439974 CERS4Q9HA82 394 aa18.41■□□□□ 0.54
ITGB1-207ENST00000439974 DOCK5Q9H7D0 1870 aa18.41■□□□□ 0.54
ITGB1-207ENST00000439974 GTPBP6O43824 516 aaPredicted RBP18.4■□□□□ 0.54
ITGB1-207ENST00000439974 EFCAB14O75071 495 aa18.4■□□□□ 0.54
ITGB1-207ENST00000439974 ARHGEF15O94989 841 aa18.4■□□□□ 0.54
ITGB1-207ENST00000439974 HOXC8P31273 242 aa18.4■□□□□ 0.54
ITGB1-207ENST00000439974 NEK4P51957 841 aa18.4■□□□□ 0.54
ITGB1-207ENST00000439974 IKBKEQ14164 716 aa18.4■□□□□ 0.54
ITGB1-207ENST00000439974 WWC2Q6AWC2 1192 aa18.4■□□□□ 0.54
ITGB1-207ENST00000439974 NLRX1Q86UT6 975 aa18.4■□□□□ 0.54
ITGB1-207ENST00000439974 MICALL1Q8N3F8 863 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms