RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 ANKRD1Q15327 319 aa27.45■■□□□ 1.98
CPNE1-217ENST00000439669 REXO1Q8N1G1 1221 aaKnown RBP27.45■■□□□ 1.98
CPNE1-217ENST00000439669 RNPC3Q96LT9 517 aaKnown RBP27.45■■□□□ 1.98
CPNE1-217ENST00000439669 SLKQ9H2G2 1235 aaPredicted RBP27.45■■□□□ 1.98
CPNE1-217ENST00000439669 DOCK5Q9H7D0 1870 aa27.44■■□□□ 1.98
CPNE1-217ENST00000439669 SREBF1P36956 1147 aa27.44■■□□□ 1.98
CPNE1-217ENST00000439669 AK2P54819 239 aa27.44■■□□□ 1.98
CPNE1-217ENST00000439669 PTGISQ16647 500 aa27.44■■□□□ 1.98
CPNE1-217ENST00000439669 SESTD1Q86VW0 696 aa27.44■■□□□ 1.98
CPNE1-217ENST00000439669 GPR20Q99678 358 aa27.44■■□□□ 1.98
CPNE1-217ENST00000439669 MXRA8Q9BRK3 442 aa27.44■■□□□ 1.98
CPNE1-217ENST00000439669 HDAC6Q9UBN7 1215 aa27.44■■□□□ 1.98
CPNE1-217ENST00000439669 TPCN1Q9ULQ1 816 aa27.44■■□□□ 1.98
CPNE1-217ENST00000439669 HAS3O00219 553 aa27.43■■□□□ 1.98
CPNE1-217ENST00000439669 ATP9AO75110 1047 aa27.43■■□□□ 1.98
CPNE1-217ENST00000439669 LGALS2P05162 132 aa27.43■■□□□ 1.98
CPNE1-217ENST00000439669 KCNA2P16389 499 aa27.43■■□□□ 1.98
CPNE1-217ENST00000439669 ZNF76P36508 570 aa27.43■■□□□ 1.98
CPNE1-217ENST00000439669 GDF6Q6KF10 455 aaPredicted RBP27.43■■□□□ 1.98
CPNE1-217ENST00000439669 BICD2Q8TD16 824 aa27.43■■□□□ 1.98
CPNE1-217ENST00000439669 IL17RAQ96F46 866 aa27.43■■□□□ 1.98
CPNE1-217ENST00000439669 C16orf70Q9BSU1 422 aa27.43■■□□□ 1.98
CPNE1-217ENST00000439669 WNT8AQ9H1J5 351 aa27.43■■□□□ 1.98
CPNE1-217ENST00000439669 GTF2IRD1Q9UHL9 959 aa27.43■■□□□ 1.98
CPNE1-217ENST00000439669 ADAMTS3O15072 1205 aa27.42■■□□□ 1.98
CPNE1-217ENST00000439669 DEXIO95424 95 aa27.42■■□□□ 1.98
CPNE1-217ENST00000439669 ARHGAP4P98171 946 aa27.42■■□□□ 1.98
CPNE1-217ENST00000439669 SCRN1Q12765 414 aa27.42■■□□□ 1.98
CPNE1-217ENST00000439669 UTP14CQ5TAP6 766 aaKnown RBP27.42■■□□□ 1.98
CPNE1-217ENST00000439669 MCTP2Q6DN12 878 aa27.42■■□□□ 1.98
CPNE1-217ENST00000439669 MAFGO15525 162 aa27.41■■□□□ 1.98
CPNE1-217ENST00000439669 CDKL5O76039 1030 aa27.41■■□□□ 1.98
CPNE1-217ENST00000439669 ACRP10323 421 aa27.41■■□□□ 1.98
CPNE1-217ENST00000439669 NLRP5P59047 1200 aa27.41■■□□□ 1.98
CPNE1-217ENST00000439669 C8orf34Q49A92 452 aa27.41■■□□□ 1.98
CPNE1-217ENST00000439669 CEP55Q53EZ4 464 aa27.41■■□□□ 1.98
CPNE1-217ENST00000439669 CYP2W1Q8TAV3 490 aa27.41■■□□□ 1.98
CPNE1-217ENST00000439669 RASGRP4Q8TDF6 673 aa27.41■■□□□ 1.98
CPNE1-217ENST00000439669 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.41■■□□□ 1.985e-13■■■■■ 64.1
CPNE1-217ENST00000439669 SH3GLB2Q9NR46 395 aa27.41■■□□□ 1.98
CPNE1-217ENST00000439669 TELO2Q9Y4R8 837 aa27.41■■□□□ 1.98
CPNE1-217ENST00000439669 H3BRB1 525 aa27.4■■□□□ 1.98
CPNE1-217ENST00000439669 PFKFB2O60825 505 aa27.4■■□□□ 1.98
CPNE1-217ENST00000439669 NEK4P51957 841 aa27.4■■□□□ 1.98
CPNE1-217ENST00000439669 TRIM50Q86XT4 487 aa27.4■■□□□ 1.98
CPNE1-217ENST00000439669 RETREG2Q8NC44 543 aa27.4■■□□□ 1.98
CPNE1-217ENST00000439669 SCLYQ96I15 445 aa27.4■■□□□ 1.98
CPNE1-217ENST00000439669 TUT1Q9H6E5 874 aaKnown RBP27.4■■□□□ 1.98
CPNE1-217ENST00000439669 IL23AQ9NPF7 189 aa27.4■■□□□ 1.98
CPNE1-217ENST00000439669 KCNH7Q9NS40 1196 aa27.4■■□□□ 1.98
CPNE1-217ENST00000439669 BFSP2Q13515 415 aa27.39■■□□□ 1.98
CPNE1-217ENST00000439669 PSRC1Q6PGN9 363 aaPredicted RBP27.39■■□□□ 1.98
CPNE1-217ENST00000439669 ZNF215Q9UL58 517 aaPredicted RBP27.39■■□□□ 1.98
CPNE1-217ENST00000439669 ARP10275 920 aa27.38■■□□□ 1.97
CPNE1-217ENST00000439669 TCF7P36402 384 aaPredicted RBP27.38■■□□□ 1.97
CPNE1-217ENST00000439669 TMEM240Q5SV17 173 aa27.38■■□□□ 1.97
CPNE1-217ENST00000439669 ZNF365Q70YC5 407 aa27.38■■□□□ 1.97
CPNE1-217ENST00000439669 C16orf59Q7L2K0 433 aa27.38■■□□□ 1.97
CPNE1-217ENST00000439669 CCDC155Q8N6L0 562 aa27.38■■□□□ 1.97
CPNE1-217ENST00000439669 SDF4Q9BRK5 362 aa27.38■■□□□ 1.97
CPNE1-217ENST00000439669 JPH1Q9HDC5 661 aaPredicted RBP27.38■■□□□ 1.97
CPNE1-217ENST00000439669 PITPNM1O00562 1244 aa27.37■■□□□ 1.97
CPNE1-217ENST00000439669 SEPT1Q8WYJ6 367 aa27.37■■□□□ 1.97
CPNE1-217ENST00000439669 AIFM3Q96NN9 605 aa27.37■■□□□ 1.97
CPNE1-217ENST00000439669 CTAGE1Q96RT6 745 aa27.37■■□□□ 1.97
CPNE1-217ENST00000439669 AGO4Q9HCK5 861 aaKnown RBP27.37■■□□□ 1.97
CPNE1-217ENST00000439669 MEIS1O00470 390 aa27.36■■□□□ 1.97
CPNE1-217ENST00000439669 SMIM10L2AP0DMW4 78 aa27.36■■□□□ 1.97
CPNE1-217ENST00000439669 SMIM10L2BP0DMW5 78 aa27.36■■□□□ 1.97
CPNE1-217ENST00000439669 ZNF200P98182 395 aaPredicted RBP27.36■■□□□ 1.97
CPNE1-217ENST00000439669 PLA2G4DQ86XP0 818 aa27.36■■□□□ 1.97
CPNE1-217ENST00000439669 RPUSD2Q8IZ73 545 aaKnown RBP27.36■■□□□ 1.97
CPNE1-217ENST00000439669 CAGE1Q8TC20 777 aa27.36■■□□□ 1.97
CPNE1-217ENST00000439669 FAM86B1E9PN63 330 aa27.35■■□□□ 1.97
CPNE1-217ENST00000439669 CYP3A4P08684 503 aa27.35■■□□□ 1.97
CPNE1-217ENST00000439669 FAM86B2P0C5J1 330 aa27.35■■□□□ 1.97
CPNE1-217ENST00000439669 NIPA1Q7RTP0 329 aa27.35■■□□□ 1.97
CPNE1-217ENST00000439669 NECAB1Q8N987 351 aa27.35■■□□□ 1.97
CPNE1-217ENST00000439669 CRYGNQ8WXF5 182 aa27.35■■□□□ 1.97
CPNE1-217ENST00000439669 SLC9A2Q9UBY0 812 aa27.35■■□□□ 1.97
CPNE1-217ENST00000439669 PCDHA4Q9UN74 947 aa27.35■■□□□ 1.97
CPNE1-217ENST00000439669 NFASCO94856 1347 aa27.35■■□□□ 1.97
CPNE1-217ENST00000439669 STK36Q9NRP7 1315 aa27.35■■□□□ 1.97
CPNE1-217ENST00000439669 GSTTP1A0A1W2PQM5 241 aa27.34■■□□□ 1.97
CPNE1-217ENST00000439669 C17orf102A2RUQ5 167 aa27.34■■□□□ 1.97
CPNE1-217ENST00000439669 DTNBO60941 627 aa27.34■■□□□ 1.97
CPNE1-217ENST00000439669 FGBP02675 491 aa27.34■■□□□ 1.97
CPNE1-217ENST00000439669 ME3Q16798 604 aa27.34■■□□□ 1.97
CPNE1-217ENST00000439669 GPR153Q6NV75 609 aa27.34■■□□□ 1.97
CPNE1-217ENST00000439669 DEFB128Q7Z7B8 93 aa27.34■■□□□ 1.97
CPNE1-217ENST00000439669 DHX38Q92620 1227 aaKnown RBP27.34■■□□□ 1.97
CPNE1-217ENST00000439669 LARGE1O95461 756 aa27.33■■□□□ 1.97
CPNE1-217ENST00000439669 IQCF3P0C7M6 154 aa27.33■■□□□ 1.97
CPNE1-217ENST00000439669 PTK7Q13308 1070 aa27.33■■□□□ 1.97
CPNE1-217ENST00000439669 ITGB3BPQ13352 177 aaPredicted RBP27.33■■□□□ 1.97
CPNE1-217ENST00000439669 HIC1Q14526 733 aa27.33■■□□□ 1.97
CPNE1-217ENST00000439669 AFAP1L1Q8TED9 768 aa27.33■■□□□ 1.97
CPNE1-217ENST00000439669 GLG1Q92896 1179 aa27.33■■□□□ 1.97
CPNE1-217ENST00000439669 MTIF3Q9H2K0 278 aaKnown RBP27.33■■□□□ 1.97
CPNE1-217ENST00000439669 TANC1Q9C0D5 1861 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms