RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 CNTNAP5Q8WYK1 1306 aa23.34■■□□□ 1.33
NCKIPSD-206ENST00000439518 NOP56O00567 594 aaKnown RBP23.34■■□□□ 1.33
NCKIPSD-206ENST00000439518 ZBTB43O43298 467 aa23.34■■□□□ 1.33
NCKIPSD-206ENST00000439518 PARNO95453 639 aaKnown RBP23.34■■□□□ 1.33
NCKIPSD-206ENST00000439518 CXCL10P02778 98 aa23.34■■□□□ 1.33
NCKIPSD-206ENST00000439518 MYOGP15173 224 aa23.34■■□□□ 1.33
NCKIPSD-206ENST00000439518 TRAF7Q6Q0C0 670 aa23.34■■□□□ 1.33
NCKIPSD-206ENST00000439518 HEATR3Q7Z4Q2 680 aa23.34■■□□□ 1.33
NCKIPSD-206ENST00000439518 NLRX1Q86UT6 975 aa23.34■■□□□ 1.33
NCKIPSD-206ENST00000439518 PHOSPHO2Q8TCD6 241 aa23.34■■□□□ 1.33
NCKIPSD-206ENST00000439518 SLC9A7Q96T83 725 aa23.34■■□□□ 1.33
NCKIPSD-206ENST00000439518 USP26Q9BXU7 913 aa23.34■■□□□ 1.33
NCKIPSD-206ENST00000439518 BAIAP3O94812 1187 aa23.33■■□□□ 1.33
NCKIPSD-206ENST00000439518 HMGB1P09429 215 aaKnown RBP23.33■■□□□ 1.33
NCKIPSD-206ENST00000439518 UBE2SQ16763 222 aa23.33■■□□□ 1.33
NCKIPSD-206ENST00000439518 RTN1Q16799 776 aa23.33■■□□□ 1.33
NCKIPSD-206ENST00000439518 SERINC5Q86VE9 423 aa23.33■■□□□ 1.33
NCKIPSD-206ENST00000439518 GPRASP2Q96D09 838 aa23.33■■□□□ 1.33
NCKIPSD-206ENST00000439518 FAM217BQ9NTX9 383 aaPredicted RBP23.33■■□□□ 1.33
NCKIPSD-206ENST00000439518 TELO2Q9Y4R8 837 aa23.33■■□□□ 1.33
NCKIPSD-206ENST00000439518 NBNO60934 754 aa23.32■■□□□ 1.32
NCKIPSD-206ENST00000439518 ITGB5P18084 799 aa23.32■■□□□ 1.32
NCKIPSD-206ENST00000439518 WWC2Q6AWC2 1192 aa23.32■■□□□ 1.32
NCKIPSD-206ENST00000439518 GAS2L1Q99501 681 aaPredicted RBP23.32■■□□□ 1.32
NCKIPSD-206ENST00000439518 UBIAD1Q9Y5Z9 338 aa23.32■■□□□ 1.32
NCKIPSD-206ENST00000439518 KLF18A0A0U1RQI7 1052 aa23.31■■□□□ 1.32
NCKIPSD-206ENST00000439518 SMIM10L2AP0DMW4 78 aa23.31■■□□□ 1.32
NCKIPSD-206ENST00000439518 SMIM10L2BP0DMW5 78 aa23.31■■□□□ 1.32
NCKIPSD-206ENST00000439518 RCAN1P53805 252 aa23.31■■□□□ 1.32
NCKIPSD-206ENST00000439518 ADGRE1Q14246 886 aa23.31■■□□□ 1.32
NCKIPSD-206ENST00000439518 ZNF618Q5T7W0 954 aa23.31■■□□□ 1.32
NCKIPSD-206ENST00000439518 PPP2R2DQ66LE6 453 aa23.31■■□□□ 1.32
NCKIPSD-206ENST00000439518 TYW1BQ6NUM6 668 aa23.31■■□□□ 1.32
NCKIPSD-206ENST00000439518 TEX2Q8IWB9 1127 aa23.31■■□□□ 1.32
NCKIPSD-206ENST00000439518 GIMAP8Q8ND71 665 aaPredicted RBP23.31■■□□□ 1.32
NCKIPSD-206ENST00000439518 CDHR1Q96JP9 859 aa23.31■■□□□ 1.32
NCKIPSD-206ENST00000439518 PCDHA6Q9UN73 950 aa23.31■■□□□ 1.32
NCKIPSD-206ENST00000439518 PCDHA8Q9Y5H6 950 aa23.31■■□□□ 1.32
NCKIPSD-206ENST00000439518 V9GY48 417 aaPredicted RBP23.31■■□□□ 1.32
NCKIPSD-206ENST00000439518 C17orf102A2RUQ5 167 aa23.3■■□□□ 1.32
NCKIPSD-206ENST00000439518 SPDYE3A6NKU9 549 aa23.3■■□□□ 1.32
NCKIPSD-206ENST00000439518 ATP9AO75110 1047 aa23.3■■□□□ 1.32
NCKIPSD-206ENST00000439518 KCNA2P16389 499 aa23.3■■□□□ 1.32
NCKIPSD-206ENST00000439518 HSPA4P34932 840 aa23.3■■□□□ 1.32
NCKIPSD-206ENST00000439518 MBTPS1Q14703 1052 aa23.3■■□□□ 1.32
NCKIPSD-206ENST00000439518 CNKSR3Q6P9H4 555 aa23.3■■□□□ 1.32
NCKIPSD-206ENST00000439518 TRIM50Q86XT4 487 aa23.3■■□□□ 1.32
NCKIPSD-206ENST00000439518 HERC6Q8IVU3 1022 aa23.3■■□□□ 1.32
NCKIPSD-206ENST00000439518 USP38Q8NB14 1042 aa23.3■■□□□ 1.32
NCKIPSD-206ENST00000439518 RNPEPQ9H4A4 650 aa23.3■■□□□ 1.32
NCKIPSD-206ENST00000439518 DOCK5Q9H7D0 1870 aa23.3■■□□□ 1.32
NCKIPSD-206ENST00000439518 GOLGA8AA7E2F4 631 aa23.29■■□□□ 1.32
NCKIPSD-206ENST00000439518 GOLGA8BA8MQT2 603 aa23.29■■□□□ 1.32
NCKIPSD-206ENST00000439518 TRANK1O15050 2925 aa23.29■■□□□ 1.32
NCKIPSD-206ENST00000439518 CPA1P15085 419 aa23.29■■□□□ 1.32
NCKIPSD-206ENST00000439518 CDC27P30260 824 aa23.29■■□□□ 1.32
NCKIPSD-206ENST00000439518 TCTN1Q2MV58 587 aa23.29■■□□□ 1.32
NCKIPSD-206ENST00000439518 PPP1R18Q6NYC8 613 aa23.29■■□□□ 1.32
NCKIPSD-206ENST00000439518 ATP6V0A1Q93050 837 aa23.29■■□□□ 1.32
NCKIPSD-206ENST00000439518 RIC8AQ9NPQ8 531 aa23.29■■□□□ 1.32
NCKIPSD-206ENST00000439518 SNX14Q9Y5W7 946 aa23.29■■□□□ 1.32
NCKIPSD-206ENST00000439518 CA3P07451 260 aa23.28■■□□□ 1.32
NCKIPSD-206ENST00000439518 NAPAP54920 295 aa23.28■■□□□ 1.32
NCKIPSD-206ENST00000439518 WDR5P61964 334 aaKnown RBP23.28■■□□□ 1.32
NCKIPSD-206ENST00000439518 SP4Q02446 784 aa23.28■■□□□ 1.32
NCKIPSD-206ENST00000439518 MTMR1Q13613 665 aa23.28■■□□□ 1.32
NCKIPSD-206ENST00000439518 JADE2Q9NQC1 790 aa23.28■■□□□ 1.32
NCKIPSD-206ENST00000439518 hCG_1984214I3L0E3 225 aa23.27■■□□□ 1.32
NCKIPSD-206ENST00000439518 STXBP3O00186 592 aa23.27■■□□□ 1.32
NCKIPSD-206ENST00000439518 TREHO43280 583 aa23.27■■□□□ 1.32
NCKIPSD-206ENST00000439518 THPOP40225 353 aa23.27■■□□□ 1.32
NCKIPSD-206ENST00000439518 KCNJ6P48051 423 aa23.27■■□□□ 1.32
NCKIPSD-206ENST00000439518 ADAM17P78536 824 aa23.27■■□□□ 1.32
NCKIPSD-206ENST00000439518 UTP14CQ5TAP6 766 aaKnown RBP23.27■■□□□ 1.32
NCKIPSD-206ENST00000439518 ZNF713Q8N859 430 aaPredicted RBP23.27■■□□□ 1.32
NCKIPSD-206ENST00000439518 JAKMIP1Q96N16 626 aaKnown RBP23.27■■□□□ 1.32
NCKIPSD-206ENST00000439518 SETD4Q9NVD3 440 aa23.27■■□□□ 1.32
NCKIPSD-206ENST00000439518 BARHL2Q9NY43 387 aa23.27■■□□□ 1.32
NCKIPSD-206ENST00000439518 ZNF215Q9UL58 517 aaPredicted RBP23.27■■□□□ 1.32
NCKIPSD-206ENST00000439518 TTC28Q96AY4 2481 aa23.27■■□□□ 1.32
NCKIPSD-206ENST00000439518 ABHD14A-ACY1A0A1B0GW23 586 aa23.26■■□□□ 1.31
NCKIPSD-206ENST00000439518 GSTTP1A0A1W2PQM5 241 aa23.26■■□□□ 1.31
NCKIPSD-206ENST00000439518 RBAK-RBAKDNI3L0D1 243 aa23.26■■□□□ 1.31
NCKIPSD-206ENST00000439518 MAFGO15525 162 aa23.26■■□□□ 1.31
NCKIPSD-206ENST00000439518 ADD1P35611 737 aaKnown RBP23.26■■□□□ 1.31
NCKIPSD-206ENST00000439518 TCF7P36402 384 aaPredicted RBP23.26■■□□□ 1.31
NCKIPSD-206ENST00000439518 FBXL16Q8N461 479 aa23.26■■□□□ 1.31
NCKIPSD-206ENST00000439518 COL25A1Q9BXS0 654 aaPredicted RBP23.26■■□□□ 1.31
NCKIPSD-206ENST00000439518 EHMT1Q9H9B1 1298 aa23.26■■□□□ 1.31
NCKIPSD-206ENST00000439518 EMSYQ7Z589 1322 aa23.26■■□□□ 1.31
NCKIPSD-206ENST00000439518 RSPH10B2B2RC85 870 aa23.25■■□□□ 1.31
NCKIPSD-206ENST00000439518 FOSP01100 380 aaPredicted RBP23.25■■□□□ 1.31
NCKIPSD-206ENST00000439518 RSPH10BP0C881 870 aa23.25■■□□□ 1.31
NCKIPSD-206ENST00000439518 GNAT1P11488 350 aa23.25■■□□□ 1.31
NCKIPSD-206ENST00000439518 ADCY7P51828 1080 aa23.25■■□□□ 1.31
NCKIPSD-206ENST00000439518 FGD1P98174 961 aa23.25■■□□□ 1.31
NCKIPSD-206ENST00000439518 APOBRQ0VD83 1088 aa23.25■■□□□ 1.31
NCKIPSD-206ENST00000439518 BLOC1S2Q6QNY1 142 aa23.25■■□□□ 1.31
NCKIPSD-206ENST00000439518 Q6ZUG5 572 aa23.25■■□□□ 1.31
NCKIPSD-206ENST00000439518 SEPT1Q8WYJ6 367 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms