RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 RARSP54136 660 aaKnown RBP10.55□□□□□ -0.72
LSMEM1-202ENST00000439068 MAP3K12Q12852 859 aa10.55□□□□□ -0.72
LSMEM1-202ENST00000439068 TNNI3KQ59H18 835 aa10.55□□□□□ -0.72
LSMEM1-202ENST00000439068 FOXR1Q6PIV2 292 aa10.55□□□□□ -0.72
LSMEM1-202ENST00000439068 TRMT2AQ8IZ69 625 aaKnown RBP10.55□□□□□ -0.72
LSMEM1-202ENST00000439068 ABRAQ8N0Z2 381 aa10.55□□□□□ -0.72
LSMEM1-202ENST00000439068 GPR161Q8N6U8 529 aaKnown RBP10.55□□□□□ -0.72
LSMEM1-202ENST00000439068 SHCBP1Q8NEM2 672 aa10.55□□□□□ -0.72
LSMEM1-202ENST00000439068 NANOS1Q8WY41 292 aaKnown RBP10.55□□□□□ -0.72
LSMEM1-202ENST00000439068 FRMD6Q96NE9 622 aa10.55□□□□□ -0.72
LSMEM1-202ENST00000439068 MROH8Q9H579 483 aa10.55□□□□□ -0.72
LSMEM1-202ENST00000439068 BTBD7Q9P203 1132 aa10.55□□□□□ -0.72
LSMEM1-202ENST00000439068 FPGT-TNNI3KV9GXZ4 949 aa10.55□□□□□ -0.72
LSMEM1-202ENST00000439068 J3QW42 95 aa10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 MPHOSPH10O00566 681 aaKnown RBP10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 SCAMP3O14828 347 aaKnown RBP10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 SURF6O75683 361 aaKnown RBP10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 RARBP10826 455 aa10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 FCER1AP12319 257 aa10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 PCBP4P57723 403 aaKnown RBP10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 DYNLL1P63167 89 aaKnown RBP10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 PLS1Q14651 629 aa10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 SHROOM1Q2M3G4 852 aaPredicted RBP10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 TRIM60Q495X7 471 aa10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 HFE2Q6ZVN8 426 aa10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 ADGRA1Q86SQ6 560 aa10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 RNF180Q86T96 592 aa10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 NCAPG2Q86XI2 1143 aa10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 ACER1Q8TDN7 264 aa10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 MYLIPQ8WY64 445 aa10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 DBNDD2Q9BQY9 259 aa10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 MOV10L1Q9BXT6 1211 aaKnown RBP10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 TANGO6Q9C0B7 1094 aa10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 SPATC1LQ9H0A9 340 aa10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 SUV39H2Q9H5I1 410 aa10.54□□□□□ -0.72
LSMEM1-202ENST00000439068 DNAH12Q6ZR08 3092 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 PNMA6EA0A0J9YXQ4 647 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 RAG1P15918 1043 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 TLE2Q04725 743 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 TBC1D8BQ0IIM8 1120 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 GAS6Q14393 721 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 LRRC41Q15345 812 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 C9orf50Q5SZB4 431 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 KIAA0319Q5VV43 1072 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 ANO1Q5XXA6 986 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 CCDC174Q6PII3 467 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 SYT9Q86SS6 491 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 MAGEB6Q8N7X4 407 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 MIGA1Q8NAN2 632 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 TRPV1Q8NER1 839 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 FRAT1Q92837 279 aaPredicted RBP10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 FERMT2Q96AC1 680 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 RNPC3Q96LT9 517 aaKnown RBP10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 CNTNAP3BQ96NU0 1288 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 CNTNAP3Q9BZ76 1288 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 SH2D4AQ9H788 454 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 NRBP1Q9UHY1 535 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 PLXNB2O15031 1838 aa10.53□□□□□ -0.72
LSMEM1-202ENST00000439068 DCDC2CA8MYV0 355 aa10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 SLC25A27O95847 323 aa10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 CLTBP09497 229 aa10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 USP17L7P0C7H9 530 aa10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 BMP4P12644 408 aa10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 EDN3P14138 238 aa10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 ATP8B2P98198 1209 aa10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 PLAURQ03405 335 aa10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 HYAL2Q12891 473 aa10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 SNX17Q15036 470 aa10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 MEI1Q5TIA1 1274 aa10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 HHIPQ96QV1 700 aa10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 XPNPEP3Q9NQH7 507 aa10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 PIH1D3Q9NQM4 214 aaKnown RBP10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 PDLIM7Q9NR12 457 aa10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 TMEM39AQ9NV64 488 aa10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 KLF15Q9UIH9 416 aa10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 LAMA2P24043 3122 aaKnown RBP10.52□□□□□ -0.73
LSMEM1-202ENST00000439068 ATAD5Q96QE3 1844 aa10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 TRIM43BA6NCK2 446 aa10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 GIPC1O14908 333 aa10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 FLOT1O75955 427 aa10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 SOX18P35713 384 aa10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 FPGSQ05932 587 aa10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 SEPT2Q15019 361 aa10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 TTF1Q15361 905 aaPredicted RBP10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 PRAMEF19Q5SWL8 479 aa10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 TMEM179Q6ZVK1 233 aa10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 CEP120Q8N960 986 aa10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 GLIS3Q8NEA6 775 aa10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 NUP133Q8WUM0 1156 aa10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 TRIM43Q96BQ3 446 aaPredicted RBP10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 ZKSCAN3Q9BRR0 538 aa10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 CRNKL1Q9BZJ0 848 aaKnown RBP10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 TTYH1Q9H313 450 aaPredicted RBP10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 MCM9Q9NXL9 1143 aa10.51□□□□□ -0.73
LSMEM1-202ENST00000439068 COBLO75128 1261 aa10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 KIF4AO95239 1232 aa10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 SHMT1P34896 483 aa10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 COPB2P35606 906 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms