RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 REXO1Q8N1G1 1221 aaKnown RBP15.17■□□□□ 0.02
LINC00399-201ENST00000439008 VWCEQ96DN2 955 aa15.17■□□□□ 0.02
LINC00399-201ENST00000439008 GPR20Q99678 358 aa15.17■□□□□ 0.02
LINC00399-201ENST00000439008 SENP7Q9BQF6 1050 aa15.17■□□□□ 0.02
LINC00399-201ENST00000439008 MLXIPQ9HAP2 919 aa15.17■□□□□ 0.02
LINC00399-201ENST00000439008 KCNH7Q9NS40 1196 aa15.17■□□□□ 0.02
LINC00399-201ENST00000439008 SCN5AQ14524 2016 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 GSTTP1A0A1W2PQM5 241 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 MEIS1O00470 390 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 SOX1O00570 391 aaPredicted RBP15.16■□□□□ 0.02
LINC00399-201ENST00000439008 PPFIA4O75335 1185 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 CD2BP2O95400 341 aaKnown RBP15.16■□□□□ 0.02
LINC00399-201ENST00000439008 CYP3A4P08684 503 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 CYP2C9P11712 490 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 CYP2C18P33260 490 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 PSEN2P49810 448 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 SP4Q02446 784 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 ITGB3BPQ13352 177 aaPredicted RBP15.16■□□□□ 0.02
LINC00399-201ENST00000439008 MTMR1Q13613 665 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 CEP55Q53EZ4 464 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 BRDTQ58F21 947 aaPredicted RBP15.16■□□□□ 0.02
LINC00399-201ENST00000439008 GDF6Q6KF10 455 aaPredicted RBP15.16■□□□□ 0.02
LINC00399-201ENST00000439008 NLRX1Q86UT6 975 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 TEX2Q8IWB9 1127 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 PPP1R12CQ9BZL4 782 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 GLT8D2Q9H1C3 349 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 MROH7Q68CQ1 1323 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 STK36Q9NRP7 1315 aa15.16■□□□□ 0.02
LINC00399-201ENST00000439008 TIMP1P01033 207 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 LGALS2P05162 132 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 FXR1P51114 621 aaKnown RBP eCLIP15.15■□□□□ 0.02
LINC00399-201ENST00000439008 NLRP5P59047 1200 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 ZNF200P98182 395 aaPredicted RBP15.15■□□□□ 0.02
LINC00399-201ENST00000439008 NEDD9Q14511 834 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 MFSD10Q14728 455 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 FAM47CQ5HY64 1035 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 C9orf50Q5SZB4 431 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 NFRKBQ6P4R8 1299 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 C16orf59Q7L2K0 433 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 OXER1Q8TDS5 423 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 CCDC12Q8WUD4 166 aaPredicted RBP15.15■□□□□ 0.02
LINC00399-201ENST00000439008 LENG9Q96B70 501 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 ALG1Q9BT22 464 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 PHF20Q9BVI0 1012 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 NOC4LQ9BVI4 516 aaKnown RBP15.15■□□□□ 0.02
LINC00399-201ENST00000439008 UBE2OQ9C0C9 1292 aaKnown RBP15.15■□□□□ 0.02
LINC00399-201ENST00000439008 WNT8AQ9H1J5 351 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 AGO4Q9HCK5 861 aaKnown RBP15.15■□□□□ 0.02
LINC00399-201ENST00000439008 ORC3Q9UBD5 711 aaPredicted RBP15.15■□□□□ 0.02
LINC00399-201ENST00000439008 HDAC6Q9UBN7 1215 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 PRKAG2Q9UGJ0 569 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 PCDHA4Q9UN74 947 aa15.15■□□□□ 0.02
LINC00399-201ENST00000439008 TET1Q8NFU7 2136 aa15.14■□□□□ 0.01
LINC00399-201ENST00000439008 DHX15O43143 795 aaKnown RBP15.14■□□□□ 0.01
LINC00399-201ENST00000439008 RAG1P15918 1043 aa15.14■□□□□ 0.01
LINC00399-201ENST00000439008 GNA11P29992 359 aa15.14■□□□□ 0.01
LINC00399-201ENST00000439008 KIAA0753Q2KHM9 967 aa15.14■□□□□ 0.01
LINC00399-201ENST00000439008 EARS2Q5JPH6 523 aaKnown RBP15.14■□□□□ 0.01
LINC00399-201ENST00000439008 CPLX2Q6PUV4 134 aaKnown RBP15.14■□□□□ 0.01
LINC00399-201ENST00000439008 BLIDQ8IZY5 108 aa15.14■□□□□ 0.01
LINC00399-201ENST00000439008 DAGLBQ8NCG7 672 aa15.14■□□□□ 0.01
LINC00399-201ENST00000439008 CCDC148Q8NFR7 591 aa15.14■□□□□ 0.01
LINC00399-201ENST00000439008 DHX38Q92620 1227 aaKnown RBP15.14■□□□□ 0.01
LINC00399-201ENST00000439008 WNT8BQ93098 351 aa15.14■□□□□ 0.01
LINC00399-201ENST00000439008 TBC1D32Q96NH3 1257 aa15.14■□□□□ 0.01
LINC00399-201ENST00000439008 PCYT2Q99447 389 aa15.14■□□□□ 0.01
LINC00399-201ENST00000439008 LBHD1Q9BQE6 289 aaPredicted RBP15.14■□□□□ 0.01
LINC00399-201ENST00000439008 EHMT1Q9H9B1 1298 aa15.14■□□□□ 0.01
LINC00399-201ENST00000439008 LIMCH1Q9UPQ0 1083 aa15.14■□□□□ 0.01
LINC00399-201ENST00000439008 WDR81Q562E7 1941 aa15.13■□□□□ 0.01
LINC00399-201ENST00000439008 FAM205CA6NFA0 338 aa15.13■□□□□ 0.01
LINC00399-201ENST00000439008 CCNE2O96020 404 aa15.13■□□□□ 0.01
LINC00399-201ENST00000439008 CIITAP33076 1130 aa15.13■□□□□ 0.01
LINC00399-201ENST00000439008 SHHQ15465 462 aa15.13■□□□□ 0.01
LINC00399-201ENST00000439008 UTP14CQ5TAP6 766 aaKnown RBP15.13■□□□□ 0.01
LINC00399-201ENST00000439008 SESTD1Q86VW0 696 aa15.13■□□□□ 0.01
LINC00399-201ENST00000439008 PLA2G4DQ86XP0 818 aa15.13■□□□□ 0.01
LINC00399-201ENST00000439008 CCDC83Q8IWF9 413 aa15.13■□□□□ 0.01
LINC00399-201ENST00000439008 GTF2IRD1Q9UHL9 959 aa15.13■□□□□ 0.01
LINC00399-201ENST00000439008 H3BRB1 525 aa15.12■□□□□ 0.01
LINC00399-201ENST00000439008 NOP56O00567 594 aaKnown RBP15.12■□□□□ 0.01
LINC00399-201ENST00000439008 TLR3O15455 904 aaKnown RBP15.12■□□□□ 0.01
LINC00399-201ENST00000439008 CDKL5O76039 1030 aa15.12■□□□□ 0.01
LINC00399-201ENST00000439008 CSF2RAP15509 400 aa15.12■□□□□ 0.01
LINC00399-201ENST00000439008 TCF7P36402 384 aaPredicted RBP15.12■□□□□ 0.01
LINC00399-201ENST00000439008 FOSBP53539 338 aa15.12■□□□□ 0.01
LINC00399-201ENST00000439008 CCL23P55773 120 aa15.12■□□□□ 0.01
LINC00399-201ENST00000439008 MFSD5Q6N075 450 aa15.12■□□□□ 0.01
LINC00399-201ENST00000439008 NIPA1Q7RTP0 329 aa15.12■□□□□ 0.01
LINC00399-201ENST00000439008 TDHQ8IZJ6 230 aa15.12■□□□□ 0.01
LINC00399-201ENST00000439008 BICD2Q8TD16 824 aa15.12■□□□□ 0.01
LINC00399-201ENST00000439008 TBCKQ8TEA7 893 aa15.12■□□□□ 0.01
LINC00399-201ENST00000439008 GJA10Q969M2 543 aa15.12■□□□□ 0.01
LINC00399-201ENST00000439008 CDHR1Q96JP9 859 aa15.12■□□□□ 0.01
LINC00399-201ENST00000439008 SEZ6LQ9BYH1 1024 aa15.12■□□□□ 0.01
LINC00399-201ENST00000439008 BACH2Q9BYV9 841 aa15.12■□□□□ 0.01
LINC00399-201ENST00000439008 HIPK3Q9H422 1215 aa15.12■□□□□ 0.01
LINC00399-201ENST00000439008 RNPEPQ9H4A4 650 aa15.12■□□□□ 0.01
LINC00399-201ENST00000439008 TUT1Q9H6E5 874 aaKnown RBP15.12■□□□□ 0.01
LINC00399-201ENST00000439008 MAFGO15525 162 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms