RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 ITGB3BPQ13352 177 aaPredicted RBP18.35■□□□□ 0.53
SNRPB-202ENST00000438552 LAMC2Q13753 1193 aa18.35■□□□□ 0.53
SNRPB-202ENST00000438552 GNL2Q13823 731 aaKnown RBP18.35■□□□□ 0.53
SNRPB-202ENST00000438552 NEDD9Q14511 834 aa18.35■□□□□ 0.53
SNRPB-202ENST00000438552 HSDL1Q3SXM5 330 aa18.35■□□□□ 0.53
SNRPB-202ENST00000438552 METTL7BQ6UX53 244 aa18.35■□□□□ 0.53
SNRPB-202ENST00000438552 CXCL17Q6UXB2 119 aa18.35■□□□□ 0.53
SNRPB-202ENST00000438552 PPTC7Q8NI37 304 aa18.35■□□□□ 0.53
SNRPB-202ENST00000438552 SENP7Q9BQF6 1050 aa18.35■□□□□ 0.53
SNRPB-202ENST00000438552 FOXP1Q9H334 677 aaPredicted RBP18.35■□□□□ 0.53
SNRPB-202ENST00000438552 SCN10AQ9Y5Y9 1956 aa18.35■□□□□ 0.53
SNRPB-202ENST00000438552 H3BQV1 296 aa18.34■□□□□ 0.53
SNRPB-202ENST00000438552 SLC37A4O43826 429 aa18.34■□□□□ 0.53
SNRPB-202ENST00000438552 ZEB2O60315 1214 aa18.34■□□□□ 0.53
SNRPB-202ENST00000438552 ATN1P54259 1190 aaPredicted RBP18.34■□□□□ 0.53
SNRPB-202ENST00000438552 BRDTQ58F21 947 aaPredicted RBP18.34■□□□□ 0.53
SNRPB-202ENST00000438552 WDR81Q562E7 1941 aa18.33■□□□□ 0.53
SNRPB-202ENST00000438552 CYP3A7-CYP3A51PA0A087WV96 503 aa18.33■□□□□ 0.52
SNRPB-202ENST00000438552 DDX39AO00148 427 aaKnown RBP18.33■□□□□ 0.52
SNRPB-202ENST00000438552 NOP56O00567 594 aaKnown RBP18.33■□□□□ 0.52
SNRPB-202ENST00000438552 WNT7AO00755 349 aa18.33■□□□□ 0.52
SNRPB-202ENST00000438552 MAFGO15525 162 aa18.33■□□□□ 0.52
SNRPB-202ENST00000438552 CCNT1O60563 726 aaKnown RBP18.33■□□□□ 0.52
SNRPB-202ENST00000438552 ZNF286BP0CG31 522 aa18.33■□□□□ 0.52
SNRPB-202ENST00000438552 CYP3A7P24462 503 aa18.33■□□□□ 0.52
SNRPB-202ENST00000438552 PURAQ00577 322 aaKnown RBP18.33■□□□□ 0.52
SNRPB-202ENST00000438552 LARP1BQ659C4 914 aaKnown RBP18.33■□□□□ 0.52
SNRPB-202ENST00000438552 MCTP1Q6DN14 999 aa18.33■□□□□ 0.52
SNRPB-202ENST00000438552 MOXD1Q6UVY6 613 aa18.33■□□□□ 0.52
SNRPB-202ENST00000438552 NOSTRINQ8IVI9 506 aa18.33■□□□□ 0.52
SNRPB-202ENST00000438552 GIMAP8Q8ND71 665 aaPredicted RBP18.33■□□□□ 0.52
SNRPB-202ENST00000438552 MBOAT7Q96N66 472 aa18.33■□□□□ 0.52
SNRPB-202ENST00000438552 ZNF577Q9BSK1 485 aa18.33■□□□□ 0.52
SNRPB-202ENST00000438552 STARD7Q9NQZ5 370 aa18.33■□□□□ 0.52
SNRPB-202ENST00000438552 POLR3EQ9NVU0 708 aa18.33■□□□□ 0.52
SNRPB-202ENST00000438552 DDX25Q9UHL0 483 aaKnown RBP18.33■□□□□ 0.52
SNRPB-202ENST00000438552 NFASCO94856 1347 aa18.32■□□□□ 0.52
SNRPB-202ENST00000438552 VPS37CA5D8V6 355 aaPredicted RBP18.32■□□□□ 0.52
SNRPB-202ENST00000438552 IPO5O00410 1097 aaKnown RBP18.32■□□□□ 0.52
SNRPB-202ENST00000438552 MSH4O15457 936 aa18.32■□□□□ 0.52
SNRPB-202ENST00000438552 HSP90AA1P07900 732 aaKnown RBP18.32■□□□□ 0.52
SNRPB-202ENST00000438552 GCFC2P16383 781 aaKnown RBP18.32■□□□□ 0.52
SNRPB-202ENST00000438552 PSMC6P62333 389 aa18.32■□□□□ 0.52
SNRPB-202ENST00000438552 DGKDQ16760 1214 aa18.32■□□□□ 0.52
SNRPB-202ENST00000438552 LRRC26Q2I0M4 334 aa18.32■□□□□ 0.52
SNRPB-202ENST00000438552 Q4G0T1 1027 aa18.32■□□□□ 0.52
SNRPB-202ENST00000438552 SPRYD3Q8NCJ5 442 aa18.32■□□□□ 0.52
SNRPB-202ENST00000438552 GJA10Q969M2 543 aa18.32■□□□□ 0.52
SNRPB-202ENST00000438552 GLT1D1Q96MS3 346 aa18.32■□□□□ 0.52
SNRPB-202ENST00000438552 GPR20Q99678 358 aa18.32■□□□□ 0.52
SNRPB-202ENST00000438552 SDF4Q9BRK5 362 aa18.32■□□□□ 0.52
SNRPB-202ENST00000438552 JPH1Q9HDC5 661 aaPredicted RBP18.32■□□□□ 0.52
SNRPB-202ENST00000438552 MYH15Q9Y2K3 1946 aa18.31■□□□□ 0.52
SNRPB-202ENST00000438552 HOXD8P13378 290 aaPredicted RBP18.31■□□□□ 0.52
SNRPB-202ENST00000438552 ATP2B1P20020 1258 aa18.31■□□□□ 0.52
SNRPB-202ENST00000438552 U2AF2P26368 475 aaKnown RBP eCLIP18.31■□□□□ 0.52
SNRPB-202ENST00000438552 POTEDQ86YR6 584 aa18.31■□□□□ 0.52
SNRPB-202ENST00000438552 PPP1R13LQ8WUF5 828 aa18.31■□□□□ 0.52
SNRPB-202ENST00000438552 VTI1AQ96AJ9 217 aa18.31■□□□□ 0.52
SNRPB-202ENST00000438552 MTG1Q9BT17 334 aaPredicted RBP18.31■□□□□ 0.52
SNRPB-202ENST00000438552 SLC9A2Q9UBY0 812 aa18.31■□□□□ 0.52
SNRPB-202ENST00000438552 DHX15O43143 795 aaKnown RBP18.3■□□□□ 0.52
SNRPB-202ENST00000438552 CABYRO75952 493 aa18.3■□□□□ 0.52
SNRPB-202ENST00000438552 PDCP20941 246 aa18.3■□□□□ 0.52
SNRPB-202ENST00000438552 PPP4R3AQ6IN85 833 aa18.3■□□□□ 0.52
SNRPB-202ENST00000438552 SLC39A5Q6ZMH5 540 aa18.3■□□□□ 0.52
SNRPB-202ENST00000438552 TRIM50Q86XT4 487 aa18.3■□□□□ 0.52
SNRPB-202ENST00000438552 ETNPPLQ8TBG4 499 aa18.3■□□□□ 0.52
SNRPB-202ENST00000438552 NAP1L4Q99733 375 aaKnown RBP18.3■□□□□ 0.52
SNRPB-202ENST00000438552 HTATIP2Q9BUP3 242 aa18.3■□□□□ 0.52
SNRPB-202ENST00000438552 ELP1O95163 1332 aa18.29■□□□□ 0.52
SNRPB-202ENST00000438552 A0A0U1RQG5 324 aaPredicted RBP18.29■□□□□ 0.52
SNRPB-202ENST00000438552 KPNA6O60684 536 aa18.29■□□□□ 0.52
SNRPB-202ENST00000438552 CCNE2O96020 404 aa18.29■□□□□ 0.52
SNRPB-202ENST00000438552 LGALS2P05162 132 aa18.29■□□□□ 0.52
SNRPB-202ENST00000438552 SYT1P21579 422 aa18.29■□□□□ 0.52
SNRPB-202ENST00000438552 TCF7P36402 384 aaPredicted RBP18.29■□□□□ 0.52
SNRPB-202ENST00000438552 RTP1P59025 263 aa18.29■□□□□ 0.52
SNRPB-202ENST00000438552 CHMP4BP1P59074 171 aa18.29■□□□□ 0.52
SNRPB-202ENST00000438552 ACTR2P61160 394 aa18.29■□□□□ 0.52
SNRPB-202ENST00000438552 SNX17Q15036 470 aa18.29■□□□□ 0.52
SNRPB-202ENST00000438552 TRIM60Q495X7 471 aa18.29■□□□□ 0.52
SNRPB-202ENST00000438552 UTP14CQ5TAP6 766 aaKnown RBP18.29■□□□□ 0.52
SNRPB-202ENST00000438552 KAT2BQ92831 832 aa18.29■□□□□ 0.52
SNRPB-202ENST00000438552 SLC5A5Q92911 643 aa18.29■□□□□ 0.52
SNRPB-202ENST00000438552 GRIN2DO15399 1336 aa18.28■□□□□ 0.52
SNRPB-202ENST00000438552 GSTTP1A0A1W2PQM5 241 aa18.28■□□□□ 0.52
SNRPB-202ENST00000438552 NEMFO60524 1076 aa18.28■□□□□ 0.52
SNRPB-202ENST00000438552 GAS7O60861 476 aa18.28■□□□□ 0.52
SNRPB-202ENST00000438552 F2P00734 622 aa18.28■□□□□ 0.52
SNRPB-202ENST00000438552 ITGA7Q13683 1181 aa18.28■□□□□ 0.52
SNRPB-202ENST00000438552 NBR1Q14596 966 aa18.28■□□□□ 0.52
SNRPB-202ENST00000438552 TTC38Q5R3I4 469 aa18.28■□□□□ 0.52
SNRPB-202ENST00000438552 LRCH2Q5VUJ6 765 aa18.28■□□□□ 0.52
SNRPB-202ENST00000438552 KCNMB3Q9NPA1 279 aa18.28■□□□□ 0.52
SNRPB-202ENST00000438552 TBC1D22BQ9NU19 505 aa18.28■□□□□ 0.52
SNRPB-202ENST00000438552 NOL7Q9UMY1 257 aaKnown RBP18.28■□□□□ 0.52
SNRPB-202ENST00000438552 ATP11BQ9Y2G3 1177 aa18.28■□□□□ 0.52
SNRPB-202ENST00000438552 PPFIA4O75335 1185 aa18.27■□□□□ 0.52
SNRPB-202ENST00000438552 MCM7P33993 719 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms