RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 CACNA2D2Q9NY47 1150 aa13.44□□□□□ -0.26
RTN4-211ENST00000438462 WNT16Q9UBV4 365 aa13.44□□□□□ -0.26
RTN4-211ENST00000438462 DBR1Q9UK59 544 aaKnown RBP13.44□□□□□ -0.26
RTN4-211ENST00000438462 FBXO4Q9UKT5 387 aa13.44□□□□□ -0.26
RTN4-211ENST00000438462 AKAP13Q12802 2813 aa13.44□□□□□ -0.26
RTN4-211ENST00000438462 NKRFO15226 690 aaKnown RBP eCLIP13.43□□□□□ -0.26
RTN4-211ENST00000438462 EOMESO95936 686 aa13.43□□□□□ -0.26
RTN4-211ENST00000438462 MTHFRP42898 656 aa13.43□□□□□ -0.26
RTN4-211ENST00000438462 PDE4BQ07343 736 aa13.43□□□□□ -0.26
RTN4-211ENST00000438462 TPRNQ4KMQ1 711 aa13.43□□□□□ -0.26
RTN4-211ENST00000438462 MAP4K1Q92918 833 aa13.43□□□□□ -0.26
RTN4-211ENST00000438462 ALG1Q9BT22 464 aa13.43□□□□□ -0.26
RTN4-211ENST00000438462 USTQ9Y2C2 406 aa13.43□□□□□ -0.26
RTN4-211ENST00000438462 LAMTOR5O43504 91 aa13.42□□□□□ -0.26
RTN4-211ENST00000438462 HOXD8P13378 290 aaPredicted RBP13.42□□□□□ -0.26
RTN4-211ENST00000438462 CSTF1Q05048 431 aaKnown RBP13.42□□□□□ -0.26
RTN4-211ENST00000438462 ITIH3Q06033 890 aa13.42□□□□□ -0.26
RTN4-211ENST00000438462 TFCP2Q12800 502 aa13.42□□□□□ -0.26
RTN4-211ENST00000438462 FOXC1Q12948 553 aa13.42□□□□□ -0.26
RTN4-211ENST00000438462 C19orf48Q6RUI8 117 aa13.42□□□□□ -0.26
RTN4-211ENST00000438462 RASGRP4Q8TDF6 673 aa13.42□□□□□ -0.26
RTN4-211ENST00000438462 APBB2Q92870 758 aa13.42□□□□□ -0.26
RTN4-211ENST00000438462 KCNK12Q9HB15 430 aa13.42□□□□□ -0.26
RTN4-211ENST00000438462 SPATA6Q9NWH7 488 aaPredicted RBP13.42□□□□□ -0.26
RTN4-211ENST00000438462 ZSCAN32Q9NX65 697 aa13.42□□□□□ -0.26
RTN4-211ENST00000438462 AKAP2Q9Y2D5 859 aa13.42□□□□□ -0.26
RTN4-211ENST00000438462 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.42□□□□□ -0.26
RTN4-211ENST00000438462 USP9XQ93008 2570 aaPredicted RBP13.41□□□□□ -0.26
RTN4-211ENST00000438462 LRP3O75074 770 aa13.41□□□□□ -0.26
RTN4-211ENST00000438462 LRRN2O75325 713 aa13.41□□□□□ -0.26
RTN4-211ENST00000438462 CTSHP09668 335 aa13.41□□□□□ -0.26
RTN4-211ENST00000438462 PHLDB3Q6NSJ2 640 aa13.41□□□□□ -0.26
RTN4-211ENST00000438462 XRRA1Q6P2D8 792 aa13.41□□□□□ -0.26
RTN4-211ENST00000438462 CERS3Q8IU89 383 aa13.41□□□□□ -0.26
RTN4-211ENST00000438462 LRRC47Q8N1G4 583 aaKnown RBP13.41□□□□□ -0.26
RTN4-211ENST00000438462 PJA1Q8NG27 643 aa13.41□□□□□ -0.26
RTN4-211ENST00000438462 DYNLL2Q96FJ2 89 aa13.41□□□□□ -0.26
RTN4-211ENST00000438462 FOXQ1Q9C009 403 aa13.41□□□□□ -0.26
RTN4-211ENST00000438462 USP44Q9H0E7 712 aa13.41□□□□□ -0.26
RTN4-211ENST00000438462 CYP39A1Q9NYL5 469 aa13.41□□□□□ -0.26
RTN4-211ENST00000438462 SWAP70Q9UH65 585 aa13.41□□□□□ -0.26
RTN4-211ENST00000438462 RALGAPA1Q6GYQ0 2036 aa13.4□□□□□ -0.26
RTN4-211ENST00000438462 DGKIO75912 1065 aa13.4□□□□□ -0.26
RTN4-211ENST00000438462 KCNK5O95279 499 aa13.4□□□□□ -0.26
RTN4-211ENST00000438462 CYP2E1P05181 493 aaPredicted RBP13.4□□□□□ -0.26
RTN4-211ENST00000438462 CYP2D6P10635 497 aa13.4□□□□□ -0.26
RTN4-211ENST00000438462 ERVFC1P60507 584 aa13.4□□□□□ -0.26
RTN4-211ENST00000438462 MAPK8IP2Q13387 824 aaPredicted RBP13.4□□□□□ -0.26
RTN4-211ENST00000438462 HIC1Q14526 733 aa13.4□□□□□ -0.26
RTN4-211ENST00000438462 PAN2Q504Q3 1202 aaKnown RBP13.4□□□□□ -0.26
RTN4-211ENST00000438462 PLPP4Q5VZY2 271 aa13.4□□□□□ -0.26
RTN4-211ENST00000438462 LAIR1Q6GTX8 287 aa13.4□□□□□ -0.26
RTN4-211ENST00000438462 CMTR2Q8IYT2 770 aaKnown RBP13.4□□□□□ -0.26
RTN4-211ENST00000438462 AFG1LQ8WV93 481 aa13.4□□□□□ -0.26
RTN4-211ENST00000438462 CASP10Q92851 521 aa13.4□□□□□ -0.26
RTN4-211ENST00000438462 MCM9Q9NXL9 1143 aa13.4□□□□□ -0.26
RTN4-211ENST00000438462 WASF3Q9UPY6 502 aa13.4□□□□□ -0.26
RTN4-211ENST00000438462 FANCIQ9NVI1 1328 aa13.39□□□□□ -0.27
RTN4-211ENST00000438462 TICRRQ7Z2Z1 1910 aa13.39□□□□□ -0.27
RTN4-211ENST00000438462 TM4SF5O14894 197 aa13.39□□□□□ -0.27
RTN4-211ENST00000438462 NDUFB10O96000 172 aa13.39□□□□□ -0.27
RTN4-211ENST00000438462 UQCRFS1P1P0C7P4 283 aa13.39□□□□□ -0.27
RTN4-211ENST00000438462 PSEN2P49810 448 aa13.39□□□□□ -0.27
RTN4-211ENST00000438462 ALDH5A1P51649 535 aaPredicted RBP13.39□□□□□ -0.27
RTN4-211ENST00000438462 UBE3AQ05086 875 aa13.39□□□□□ -0.27
RTN4-211ENST00000438462 CSRP2Q16527 193 aa13.39□□□□□ -0.27
RTN4-211ENST00000438462 KIAA1841Q6NSI8 718 aa13.39□□□□□ -0.27
RTN4-211ENST00000438462 SERINC5Q86VE9 423 aa13.39□□□□□ -0.27
RTN4-211ENST00000438462 GLIS3Q8NEA6 775 aa13.39□□□□□ -0.27
RTN4-211ENST00000438462 PIK3R5Q8WYR1 880 aa13.39□□□□□ -0.27
RTN4-211ENST00000438462 KANSL2Q9H9L4 492 aa13.39□□□□□ -0.27
RTN4-211ENST00000438462 RAB23Q9ULC3 237 aa13.39□□□□□ -0.27
RTN4-211ENST00000438462 GPSM3Q9Y4H4 160 aa13.39□□□□□ -0.27
RTN4-211ENST00000438462 GREB1LQ9C091 1923 aaPredicted RBP13.39□□□□□ -0.27
RTN4-211ENST00000438462 FSCN2O14926 492 aa13.38□□□□□ -0.27
RTN4-211ENST00000438462 MFSD10Q14728 455 aa13.38□□□□□ -0.27
RTN4-211ENST00000438462 RARS2Q5T160 578 aaKnown RBP13.38□□□□□ -0.27
RTN4-211ENST00000438462 PSAPL1Q6NUJ1 521 aa13.38□□□□□ -0.27
RTN4-211ENST00000438462 DHX37Q8IY37 1157 aaKnown RBP13.38□□□□□ -0.27
RTN4-211ENST00000438462 SCFD2Q8WU76 684 aa13.38□□□□□ -0.27
RTN4-211ENST00000438462 NELL1Q92832 810 aa13.38□□□□□ -0.27
RTN4-211ENST00000438462 ACSF2Q96CM8 615 aaPredicted RBP13.38□□□□□ -0.27
RTN4-211ENST00000438462 TRERF1Q96PN7 1200 aa13.38□□□□□ -0.27
RTN4-211ENST00000438462 PIH1D3Q9NQM4 214 aaKnown RBP13.38□□□□□ -0.27
RTN4-211ENST00000438462 ARHGEF3Q9NR81 526 aa13.38□□□□□ -0.27
RTN4-211ENST00000438462 TTC3P53804 2025 aa13.38□□□□□ -0.27
RTN4-211ENST00000438462 ARIH2O95376 493 aa13.37□□□□□ -0.27
RTN4-211ENST00000438462 TOP3BO95985 862 aaKnown RBP13.37□□□□□ -0.27
RTN4-211ENST00000438462 RETP07949 1114 aa13.37□□□□□ -0.27
RTN4-211ENST00000438462 TXNP10599 105 aaKnown RBP13.37□□□□□ -0.27
RTN4-211ENST00000438462 ALAS1P13196 640 aa13.37□□□□□ -0.27
RTN4-211ENST00000438462 LIMK1P53667 647 aa13.37□□□□□ -0.27
RTN4-211ENST00000438462 KIAA0753Q2KHM9 967 aa13.37□□□□□ -0.27
RTN4-211ENST00000438462 COL28A1Q2UY09 1125 aa13.37□□□□□ -0.27
RTN4-211ENST00000438462 MUM1L1Q5H9M0 696 aa13.37□□□□□ -0.27
RTN4-211ENST00000438462 NSMFQ6X4W1 530 aa13.37□□□□□ -0.27
RTN4-211ENST00000438462 KATNAL1Q9BW62 490 aa13.37□□□□□ -0.27
RTN4-211ENST00000438462 COPRSQ9NQ92 184 aa13.37□□□□□ -0.27
RTN4-211ENST00000438462 RXFP3Q9NSD7 469 aa13.37□□□□□ -0.27
RTN4-211ENST00000438462 HCFC2Q9Y5Z7 792 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms