RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 GCGRP47871 477 aa9.02□□□□□ -0.97
VPS50-204ENST00000438395 RABGGTBP53611 331 aa9.02□□□□□ -0.97
VPS50-204ENST00000438395 SART3Q15020 963 aaKnown RBP9.02□□□□□ -0.97
VPS50-204ENST00000438395 CCDC85BQ15834 202 aaPredicted RBP9.02□□□□□ -0.97
VPS50-204ENST00000438395 PTGISQ16647 500 aa9.02□□□□□ -0.97
VPS50-204ENST00000438395 DGKDQ16760 1214 aa9.02□□□□□ -0.97
VPS50-204ENST00000438395 QRICH1Q2TAL8 776 aa9.02□□□□□ -0.97
VPS50-204ENST00000438395 Q6ZNB5 142 aa9.02□□□□□ -0.97
VPS50-204ENST00000438395 C7orf31Q8N865 590 aa9.02□□□□□ -0.97
VPS50-204ENST00000438395 USP38Q8NB14 1042 aa9.02□□□□□ -0.97
VPS50-204ENST00000438395 CAGE1Q8TC20 777 aa9.02□□□□□ -0.97
VPS50-204ENST00000438395 AFG1LQ8WV93 481 aa9.02□□□□□ -0.97
VPS50-204ENST00000438395 ATXN2LQ8WWM7 1075 aaKnown RBP9.02□□□□□ -0.97
VPS50-204ENST00000438395 COPS5Q92905 334 aa9.02□□□□□ -0.97
VPS50-204ENST00000438395 SLC9A7Q96T83 725 aa9.02□□□□□ -0.97
VPS50-204ENST00000438395 KATNAL1Q9BW62 490 aa9.02□□□□□ -0.97
VPS50-204ENST00000438395 AMNQ9BXJ7 453 aa9.02□□□□□ -0.97
VPS50-204ENST00000438395 OSBPL3Q9H4L5 887 aa9.02□□□□□ -0.97
VPS50-204ENST00000438395 MRVI1Q9Y6F6 885 aa9.02□□□□□ -0.97
VPS50-204ENST00000438395 BDP1A6H8Y1 2624 aa9.01□□□□□ -0.97
VPS50-204ENST00000438395 KLRF2D3W0D1 207 aa9.01□□□□□ -0.97
VPS50-204ENST00000438395 EIF3JO75822 258 aaKnown RBP9.01□□□□□ -0.97
VPS50-204ENST00000438395 ADH1BP00325 375 aa9.01□□□□□ -0.97
VPS50-204ENST00000438395 MRPS5P82675 430 aaKnown RBP9.01□□□□□ -0.97
VPS50-204ENST00000438395 AAK1Q2M2I8 961 aa9.01□□□□□ -0.97
VPS50-204ENST00000438395 HOMER1Q86YM7 354 aa9.01□□□□□ -0.97
VPS50-204ENST00000438395 DHX37Q8IY37 1157 aaKnown RBP9.01□□□□□ -0.97
VPS50-204ENST00000438395 EXOC6Q8TAG9 804 aa9.01□□□□□ -0.97
VPS50-204ENST00000438395 AFAP1L1Q8TED9 768 aa9.01□□□□□ -0.97
VPS50-204ENST00000438395 ANKS1AQ92625 1134 aa9.01□□□□□ -0.97
VPS50-204ENST00000438395 TAAR1Q96RJ0 339 aa9.01□□□□□ -0.97
VPS50-204ENST00000438395 CDH23Q9H251 3354 aa9.01□□□□□ -0.97
VPS50-204ENST00000438395 JMJD4Q9H9V9 463 aa9.01□□□□□ -0.97
VPS50-204ENST00000438395 ZSWIM5Q9P217 1185 aa9.01□□□□□ -0.97
VPS50-204ENST00000438395 YBX2Q9Y2T7 364 aaKnown RBP9.01□□□□□ -0.97
VPS50-204ENST00000438395 MYO9BQ13459 2157 aa9□□□□□ -0.97
VPS50-204ENST00000438395 CHD9Q3L8U1 2897 aa9□□□□□ -0.97
VPS50-204ENST00000438395 BAIAP3O94812 1187 aa9□□□□□ -0.97
VPS50-204ENST00000438395 ARIH2O95376 493 aa9□□□□□ -0.97
VPS50-204ENST00000438395 PARNO95453 639 aaKnown RBP9□□□□□ -0.97
VPS50-204ENST00000438395 CA3P07451 260 aa9□□□□□ -0.97
VPS50-204ENST00000438395 NR3C2P08235 984 aa9□□□□□ -0.97
VPS50-204ENST00000438395 MMP3P08254 477 aa9□□□□□ -0.97
VPS50-204ENST00000438395 MYCLP12524 364 aaPredicted RBP9□□□□□ -0.97
VPS50-204ENST00000438395 SELPP16109 830 aa9□□□□□ -0.97
VPS50-204ENST00000438395 ARHGAP1Q07960 439 aa9□□□□□ -0.97
VPS50-204ENST00000438395 LAMC2Q13753 1193 aa9□□□□□ -0.97
VPS50-204ENST00000438395 LY6KQ17RY6 165 aa9□□□□□ -0.97
VPS50-204ENST00000438395 CCDC62Q6P9F0 684 aa9□□□□□ -0.97
VPS50-204ENST00000438395 KCNV1Q6PIU1 500 aa9□□□□□ -0.97
VPS50-204ENST00000438395 LRRC8DQ7L1W4 858 aa9□□□□□ -0.97
VPS50-204ENST00000438395 PHOSPHO2Q8TCD6 241 aa9□□□□□ -0.97
VPS50-204ENST00000438395 PPP1R13LQ8WUF5 828 aa9□□□□□ -0.97
VPS50-204ENST00000438395 TMUB1Q9BVT8 246 aa9□□□□□ -0.97
VPS50-204ENST00000438395 PXMP2Q9NR77 195 aa9□□□□□ -0.97
VPS50-204ENST00000438395 PCDHA1Q9Y5I3 950 aa9□□□□□ -0.97
VPS50-204ENST00000438395 V9GY48 417 aaPredicted RBP9□□□□□ -0.97
VPS50-204ENST00000438395 EYSQ5T1H1 3165 aa9□□□□□ -0.97
VPS50-204ENST00000438395 VCANP13611 3396 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 GCOM1H8Y6P7 765 aaPredicted RBP8.99□□□□□ -0.97
VPS50-204ENST00000438395 TNFRSF10AO00220 468 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 NOP56O00567 594 aaKnown RBP8.99□□□□□ -0.97
VPS50-204ENST00000438395 IFIT3O14879 490 aaKnown RBP8.99□□□□□ -0.97
VPS50-204ENST00000438395 ZBTB5O15062 677 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 IGHDP01880 384 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 IQCF3P0C7M6 154 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 POLR2MP0CAP2 368 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 ZNF286BP0CG31 522 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 MYOGP15173 224 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 CCND2P30279 289 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 ADGRE1Q14246 886 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 GNPTABQ3T906 1256 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 HERC6Q8IVU3 1022 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 PPTC7Q8NI37 304 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 ADAMTS19Q8TE59 1207 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 SPATA33Q96N06 139 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 ASB2Q96Q27 587 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 SPSB2Q99619 263 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 ALG1Q9BT22 464 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 SLC6A16Q9GZN6 736 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 PRDM6Q9NQX0 595 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 MAP3K20Q9NYL2 800 aaKnown RBP8.99□□□□□ -0.97
VPS50-204ENST00000438395 COL20A1Q9P218 1284 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 SLC27A5Q9Y2P5 690 aa8.99□□□□□ -0.97
VPS50-204ENST00000438395 EFCAB14O75071 495 aa8.98□□□□□ -0.97
VPS50-204ENST00000438395 HOXA13P31271 388 aaPredicted RBP8.98□□□□□ -0.97
VPS50-204ENST00000438395 HSD17B4P51659 736 aa8.98□□□□□ -0.97
VPS50-204ENST00000438395 WTAPQ15007 396 aa8.98□□□□□ -0.97
VPS50-204ENST00000438395 KIAA0753Q2KHM9 967 aa8.98□□□□□ -0.97
VPS50-204ENST00000438395 PLA2G2CQ5R387 149 aa8.98□□□□□ -0.97
VPS50-204ENST00000438395 TTC22Q5TAA0 569 aa8.98□□□□□ -0.97
VPS50-204ENST00000438395 GDF6Q6KF10 455 aaPredicted RBP8.98□□□□□ -0.97
VPS50-204ENST00000438395 CATIPQ7Z7H3 387 aa8.98□□□□□ -0.97
VPS50-204ENST00000438395 SESTD1Q86VW0 696 aa8.98□□□□□ -0.97
VPS50-204ENST00000438395 FCHSD1Q86WN1 690 aa8.98□□□□□ -0.97
VPS50-204ENST00000438395 SAMD3Q8N6K7 520 aa8.98□□□□□ -0.97
VPS50-204ENST00000438395 ARNTL2Q8WYA1 636 aa8.98□□□□□ -0.97
VPS50-204ENST00000438395 TBC1D5Q92609 795 aa8.98□□□□□ -0.97
VPS50-204ENST00000438395 UHRF1Q96T88 793 aaPredicted RBP8.98□□□□□ -0.97
VPS50-204ENST00000438395 CERS4Q9HA82 394 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms