RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 FIGNQ5HY92 759 aa18.47■□□□□ 0.55
TTC3-209ENST00000438055 SLFN13Q68D06 897 aa18.47■□□□□ 0.55
TTC3-209ENST00000438055 PDXDC1Q6P996 788 aa18.47■□□□□ 0.55
TTC3-209ENST00000438055 TAF4BQ92750 862 aa18.47■□□□□ 0.55
TTC3-209ENST00000438055 PACSIN2Q9UNF0 486 aaPredicted RBP18.47■□□□□ 0.55
TTC3-209ENST00000438055 SPDYE3A6NKU9 549 aa18.46■□□□□ 0.55
TTC3-209ENST00000438055 ANKRD65E5RJM6 399 aa18.46■□□□□ 0.55
TTC3-209ENST00000438055 NR2F2P24468 414 aa18.46■□□□□ 0.55
TTC3-209ENST00000438055 PPP1R11O60927 126 aaPredicted RBP18.46■□□□□ 0.55
TTC3-209ENST00000438055 GDF11O95390 407 aa18.46■□□□□ 0.55
TTC3-209ENST00000438055 PPARDQ03181 441 aa18.46■□□□□ 0.55
TTC3-209ENST00000438055 EHHADHQ08426 723 aa18.46■□□□□ 0.55
TTC3-209ENST00000438055 PSMD2Q13200 908 aa18.46■□□□□ 0.55
TTC3-209ENST00000438055 ORC2Q13416 577 aaPredicted RBP18.46■□□□□ 0.55
TTC3-209ENST00000438055 FGFBP2Q9BYJ0 223 aa18.46■□□□□ 0.55
TTC3-209ENST00000438055 HPCAL4Q9UM19 191 aa18.46■□□□□ 0.55
TTC3-209ENST00000438055 CASZ1Q86V15 1759 aa18.46■□□□□ 0.55
TTC3-209ENST00000438055 GOLGA6CA6NDK9 693 aa18.46■□□□□ 0.54
TTC3-209ENST00000438055 GOLGA6DP0CG33 693 aa18.46■□□□□ 0.54
TTC3-209ENST00000438055 CCNI2Q6ZMN8 369 aaPredicted RBP18.46■□□□□ 0.54
TTC3-209ENST00000438055 ANO3Q9BYT9 981 aa18.46■□□□□ 0.54
TTC3-209ENST00000438055 CENPHQ9H3R5 247 aa18.46■□□□□ 0.54
TTC3-209ENST00000438055 GOLGA6AQ9NYA3 693 aa18.46■□□□□ 0.54
TTC3-209ENST00000438055 KDM3AQ9Y4C1 1321 aa18.45■□□□□ 0.54
TTC3-209ENST00000438055 LRRC55Q6ZSA7 311 aa18.45■□□□□ 0.54
TTC3-209ENST00000438055 HAS1Q92839 578 aa18.45■□□□□ 0.54
TTC3-209ENST00000438055 TMCO5BA8MYB1 307 aa18.45■□□□□ 0.54
TTC3-209ENST00000438055 TAL1P17542 331 aaPredicted RBP18.45■□□□□ 0.54
TTC3-209ENST00000438055 ASIC2Q16515 512 aa18.45■□□□□ 0.54
TTC3-209ENST00000438055 CDC37Q16543 378 aaPredicted RBP18.45■□□□□ 0.54
TTC3-209ENST00000438055 FAM76AQ8TAV0 307 aa18.45■□□□□ 0.54
TTC3-209ENST00000438055 ESYT3A0FGR9 886 aa18.44■□□□□ 0.54
TTC3-209ENST00000438055 CHMP2AO43633 222 aa18.44■□□□□ 0.54
TTC3-209ENST00000438055 SHROOM1Q2M3G4 852 aaPredicted RBP18.44■□□□□ 0.54
TTC3-209ENST00000438055 CERKLQ49MI3 558 aaPredicted RBP18.44■□□□□ 0.54
TTC3-209ENST00000438055 CDC42EP5Q6NZY7 148 aa18.44■□□□□ 0.54
TTC3-209ENST00000438055 ERMNQ8TAM6 284 aa18.44■□□□□ 0.54
TTC3-209ENST00000438055 COA1Q9GZY4 146 aa18.44■□□□□ 0.54
TTC3-209ENST00000438055 SWAP70Q9UH65 585 aa18.44■□□□□ 0.54
TTC3-209ENST00000438055 IVLP07476 585 aa18.44■□□□□ 0.54
TTC3-209ENST00000438055 EEF2P13639 858 aaKnown RBP18.44■□□□□ 0.54
TTC3-209ENST00000438055 CFAP221Q4G0U5 840 aa18.44■□□□□ 0.54
TTC3-209ENST00000438055 TTC19Q6DKK2 380 aaPredicted RBP18.44■□□□□ 0.54
TTC3-209ENST00000438055 SPICE1Q8N0Z3 855 aa18.44■□□□□ 0.54
TTC3-209ENST00000438055 CERS5Q8N5B7 392 aa18.44■□□□□ 0.54
TTC3-209ENST00000438055 MTMR8Q96EF0 704 aa18.44■□□□□ 0.54
TTC3-209ENST00000438055 FAM163AQ96GL9 167 aaPredicted RBP18.44■□□□□ 0.54
TTC3-209ENST00000438055 DNM3Q9UQ16 869 aa18.44■□□□□ 0.54
TTC3-209ENST00000438055 GAKO14976 1311 aa18.44■□□□□ 0.54
TTC3-209ENST00000438055 TBCAO75347 108 aaKnown RBP18.44■□□□□ 0.54
TTC3-209ENST00000438055 PALMO75781 387 aa18.44■□□□□ 0.54
TTC3-209ENST00000438055 GCFC2P16383 781 aaKnown RBP18.44■□□□□ 0.54
TTC3-209ENST00000438055 HLTFQ14527 1009 aaKnown RBP eCLIP18.44■□□□□ 0.541e-7■■■□□ 18.1
TTC3-209ENST00000438055 TRMT1LQ7Z2T5 733 aaKnown RBP18.44■□□□□ 0.54
TTC3-209ENST00000438055 KLHL7Q8IXQ5 586 aa18.44■□□□□ 0.54
TTC3-209ENST00000438055 SCN7AQ01118 1682 aa18.44■□□□□ 0.54
TTC3-209ENST00000438055 HOXA13P31271 388 aaPredicted RBP18.43■□□□□ 0.54
TTC3-209ENST00000438055 HAUS3Q68CZ6 603 aa18.43■□□□□ 0.54
TTC3-209ENST00000438055 PPP4R3AQ6IN85 833 aa18.43■□□□□ 0.54
TTC3-209ENST00000438055 CREG2Q8IUH2 290 aa18.43■□□□□ 0.54
TTC3-209ENST00000438055 ZFPM1Q8IX07 1006 aa18.43■□□□□ 0.54
TTC3-209ENST00000438055 FAM184BQ9ULE4 1060 aa18.43■□□□□ 0.54
TTC3-209ENST00000438055 TARSL2A2RTX5 802 aaKnown RBP18.43■□□□□ 0.54
TTC3-209ENST00000438055 PRPF6O94906 941 aaKnown RBP18.43■□□□□ 0.54
TTC3-209ENST00000438055 SHMT1P34896 483 aa18.43■□□□□ 0.54
TTC3-209ENST00000438055 CDK17Q00537 523 aa18.43■□□□□ 0.54
TTC3-209ENST00000438055 DNAAF5Q86Y56 855 aa18.43■□□□□ 0.54
TTC3-209ENST00000438055 PCDHB13Q9Y5F0 798 aa18.43■□□□□ 0.54
TTC3-209ENST00000438055 ACTN1P12814 892 aa18.43■□□□□ 0.54
TTC3-209ENST00000438055 GUCY2FP51841 1108 aa18.43■□□□□ 0.54
TTC3-209ENST00000438055 SEPT2Q15019 361 aa18.43■□□□□ 0.54
TTC3-209ENST00000438055 SEPT11Q9NVA2 429 aaKnown RBP18.43■□□□□ 0.54
TTC3-209ENST00000438055 CEP72Q9P209 647 aa18.43■□□□□ 0.54
TTC3-209ENST00000438055 ARMCX3Q9UH62 379 aaPredicted RBP18.43■□□□□ 0.54
TTC3-209ENST00000438055 SALL4Q9UJQ4 1053 aa18.43■□□□□ 0.54
TTC3-209ENST00000438055 SFI1A8K8P3 1242 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 HSF2BPO75031 334 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 ICA1Q05084 483 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 C15orf52Q6ZUT6 534 aaKnown RBP18.42■□□□□ 0.54
TTC3-209ENST00000438055 SEPT12Q8IYM1 358 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 PROM2Q8N271 834 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 DNAJC19Q96DA6 116 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 CLIC2O15247 247 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 GCNT3O95395 438 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 SERPING1P05155 500 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 IRX5P78411 483 aaPredicted RBP18.42■□□□□ 0.54
TTC3-209ENST00000438055 DDR1Q08345 913 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 KCNH2Q12809 1159 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 FOXR1Q6PIV2 292 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 RBM12Q9NTZ6 932 aaKnown RBP18.42■□□□□ 0.54
TTC3-209ENST00000438055 TRIM37O94972 964 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 GUCY2DQ02846 1103 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 KCNMA1Q12791 1236 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 TMEM119Q4V9L6 283 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 BAP1Q92560 729 aa18.42■□□□□ 0.54
TTC3-209ENST00000438055 GOLPH3Q9H4A6 298 aa18.41■□□□□ 0.54
TTC3-209ENST00000438055 PCDHAC2Q9Y5I4 1007 aa18.41■□□□□ 0.54
TTC3-209ENST00000438055 MED24O75448 989 aa18.41■□□□□ 0.54
TTC3-209ENST00000438055 ARHGAP4P98171 946 aa18.41■□□□□ 0.54
TTC3-209ENST00000438055 SFR1Q86XK3 245 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms