RNA–Protein interactions for RNA: ENST00000437302.5

ITGB1-206, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-206ENST00000437302 TSPAN6O43657 245 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 PDE8AO60658 829 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 DGKIO75912 1065 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 SOD2P04179 222 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 DLG4P78352 724 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 NFKB2Q00653 900 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 PAK1Q13153 545 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 FAM50AQ14320 339 aaKnown RBP4.8□□□□□ -1.64
ITGB1-206ENST00000437302 TTF1Q15361 905 aaPredicted RBP4.8□□□□□ -1.64
ITGB1-206ENST00000437302 CHRNA2Q15822 529 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 NFE2Q16621 373 aaPredicted RBP4.8□□□□□ -1.64
ITGB1-206ENST00000437302 CT47A1Q5JQC4 288 aaPredicted RBP4.8□□□□□ -1.64
ITGB1-206ENST00000437302 HABP4Q5JVS0 413 aaKnown RBP4.8□□□□□ -1.64
ITGB1-206ENST00000437302 CYP4F22Q6NT55 531 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 RNF180Q86T96 592 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 PCDH19Q8TAB3 1148 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.8□□□□□ -1.64
ITGB1-206ENST00000437302 SCLYQ96I15 445 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 RPS6KC1Q96S38 1066 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 PPP1R16BQ96T49 567 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 AP5M1Q9H0R1 490 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 SIRT5Q9NXA8 310 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 NDOR1Q9UHB4 597 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 DBR1Q9UK59 544 aaKnown RBP4.8□□□□□ -1.64
ITGB1-206ENST00000437302 ZNF652Q9Y2D9 606 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 HCFC2Q9Y5Z7 792 aa4.8□□□□□ -1.64
ITGB1-206ENST00000437302 GSG1L2A8MUP6 293 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 FAM47E-STBD1D6RA91 191 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 HGSO14964 777 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-206ENST00000437302 TADA3O75528 432 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 CRTAMO95727 393 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 TSPAN15O95858 294 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 GNALP38405 381 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 CDR1P51861 262 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 GUCY1A3Q02108 690 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 PABPC4Q13310 644 aaKnown RBP eCLIP4.79□□□□□ -1.64
ITGB1-206ENST00000437302 BIRC2Q13490 618 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 ZNF648Q5T619 568 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-206ENST00000437302 SYDE1Q6ZW31 735 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-206ENST00000437302 BRAPQ7Z569 592 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 MTDHQ86UE4 582 aaKnown RBP4.79□□□□□ -1.64
ITGB1-206ENST00000437302 LDHDQ86WU2 507 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 WDR75Q8IWA0 830 aaKnown RBP4.79□□□□□ -1.64
ITGB1-206ENST00000437302 MAGEB10Q96LZ2 347 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-206ENST00000437302 CLUHP3Q96NS8 147 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 JAM3Q9BX67 310 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 PDGFDQ9GZP0 370 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-206ENST00000437302 RNF38Q9H0F5 515 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 IPPKQ9H8X2 491 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 RXFP1Q9HBX9 757 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 SLC6A20Q9NP91 592 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 SIT1Q9Y3P8 196 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 PCDHA9Q9Y5H5 950 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 PCDHA8Q9Y5H6 950 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 PCDHA5Q9Y5H7 936 aa4.79□□□□□ -1.64
ITGB1-206ENST00000437302 WASHC2CQ9Y4E1 1318 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 ETV2O00321 342 aaPredicted RBP4.78□□□□□ -1.64
ITGB1-206ENST00000437302 N4BP3O15049 544 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 CREB3O43889 395 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 RAPGEF3O95398 923 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 IGFBP6P24592 240 aaPredicted RBP4.78□□□□□ -1.64
ITGB1-206ENST00000437302 ZNF200P98182 395 aaPredicted RBP4.78□□□□□ -1.64
ITGB1-206ENST00000437302 SPIRE1Q08AE8 756 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 UBE4AQ14139 1066 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 TARBP2Q15633 366 aaKnown RBP4.78□□□□□ -1.64
ITGB1-206ENST00000437302 MAP9Q49MG5 647 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 STEAP3Q658P3 488 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 TMEM132EQ6IEE7 984 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 OTOP3Q7RTS5 596 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 MIB1Q86YT6 1006 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 AFAP1L2Q8N4X5 818 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 UBR7Q8N806 425 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 PHOSPHO1Q8TCT1 267 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 MZB1Q8WU39 189 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 CPA5Q8WXQ8 436 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 KCNN1Q92952 543 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 SLC38A3Q99624 504 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 SMOC1Q9H4F8 434 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 CD320Q9NPF0 282 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 PALD1Q9ULE6 856 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 MAPRE3Q9UPY8 281 aa4.78□□□□□ -1.64
ITGB1-206ENST00000437302 TCRBV16S1A1N1A0A5B0 115 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 KRIT1O00522 736 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 MAFKO60675 156 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 CAND2O75155 1236 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 RASGRP1O95267 797 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 ASGR2P07307 311 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 TMEM253P0C7T8 217 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 EPHB3P54753 998 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 MCL1Q07820 350 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 PPP2R5AQ15172 486 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 C16orf59Q7L2K0 433 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 FGD2Q7Z6J4 655 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 MILR1Q7Z6M3 343 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 AMIGO3Q86WK7 504 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 IGDCC3Q8IVU1 814 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 UHMK1Q8TAS1 419 aaKnown RBP4.77□□□□□ -1.65
ITGB1-206ENST00000437302 PIP4K2CQ8TBX8 421 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 FBXW5Q969U6 566 aa4.77□□□□□ -1.65
ITGB1-206ENST00000437302 SGPP1Q9BX95 441 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms