RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 LINC00271P0C7V0 271 aa18.51■□□□□ 0.55
NUP50-209ENST00000432340 IFNL3Q8IZI9 196 aa18.51■□□□□ 0.55
NUP50-209ENST00000432340 TMEM105Q8N8V8 129 aa18.51■□□□□ 0.55
NUP50-209ENST00000432340 KREMEN2Q8NCW0 462 aa18.51■□□□□ 0.55
NUP50-209ENST00000432340 KCNG4Q8TDN1 519 aa18.51■□□□□ 0.55
NUP50-209ENST00000432340 RMDN1Q96DB5 314 aa18.51■□□□□ 0.55
NUP50-209ENST00000432340 NAPBQ9H115 298 aa18.51■□□□□ 0.55
NUP50-209ENST00000432340 EPB41L4AQ9HCS5 686 aaPredicted RBP18.51■□□□□ 0.55
NUP50-209ENST00000432340 KMT2EQ8IZD2 1858 aa18.51■□□□□ 0.55
NUP50-209ENST00000432340 PDGFBP01127 241 aaPredicted RBP18.5■□□□□ 0.55
NUP50-209ENST00000432340 PPARAQ07869 468 aa18.5■□□□□ 0.55
NUP50-209ENST00000432340 CAMK1Q14012 370 aa18.5■□□□□ 0.55
NUP50-209ENST00000432340 MICAL1Q8TDZ2 1067 aa18.5■□□□□ 0.55
NUP50-209ENST00000432340 SPATA33Q96N06 139 aa18.5■□□□□ 0.55
NUP50-209ENST00000432340 C5orf42Q9H799 3197 aa18.5■□□□□ 0.55
NUP50-209ENST00000432340 TRIP12Q14669 1992 aaPredicted RBP18.5■□□□□ 0.55
NUP50-209ENST00000432340 EPG5Q9HCE0 2579 aa18.49■□□□□ 0.55
NUP50-209ENST00000432340 MICAL3Q7RTP6 2002 aa18.49■□□□□ 0.55
NUP50-209ENST00000432340 MYO7AQ13402 2215 aa18.49■□□□□ 0.55
NUP50-209ENST00000432340 RNF113AO15541 343 aaKnown RBP18.49■□□□□ 0.55
NUP50-209ENST00000432340 UBE3AQ05086 875 aa18.49■□□□□ 0.55
NUP50-209ENST00000432340 TTBK2Q6IQ55 1244 aa18.49■□□□□ 0.55
NUP50-209ENST00000432340 PDE12Q6L8Q7 609 aaKnown RBP18.49■□□□□ 0.55
NUP50-209ENST00000432340 RBM23Q86U06 439 aaKnown RBP18.49■□□□□ 0.55
NUP50-209ENST00000432340 CMTR2Q8IYT2 770 aaKnown RBP18.49■□□□□ 0.55
NUP50-209ENST00000432340 KBTBD3Q8NAB2 608 aa18.49■□□□□ 0.55
NUP50-209ENST00000432340 SPPL3Q8TCT6 385 aa18.49■□□□□ 0.55
NUP50-209ENST00000432340 OSBP2Q969R2 916 aa18.49■□□□□ 0.55
NUP50-209ENST00000432340 RMDN3Q96TC7 470 aa18.49■□□□□ 0.55
NUP50-209ENST00000432340 RC3H2Q9HBD1 1191 aaKnown RBP18.49■□□□□ 0.55
NUP50-209ENST00000432340 LMNAP02545 664 aaKnown RBP18.48■□□□□ 0.55
NUP50-209ENST00000432340 ITGB1P05556 798 aa18.48■□□□□ 0.55
NUP50-209ENST00000432340 TOP1P11387 765 aaKnown RBP18.48■□□□□ 0.55
NUP50-209ENST00000432340 ARHGEF16Q5VV41 709 aa18.48■□□□□ 0.55
NUP50-209ENST00000432340 POF1BQ8WVV4 589 aa18.48■□□□□ 0.55
NUP50-209ENST00000432340 ZNF689Q96CS4 500 aaPredicted RBP18.48■□□□□ 0.55
NUP50-209ENST00000432340 H3BRB1 525 aa18.47■□□□□ 0.55
NUP50-209ENST00000432340 DGKIO75912 1065 aa18.47■□□□□ 0.55
NUP50-209ENST00000432340 GLP2RO95838 553 aa18.47■□□□□ 0.55
NUP50-209ENST00000432340 HOXB8P17481 243 aaPredicted RBP18.47■□□□□ 0.55
NUP50-209ENST00000432340 HOXC8P31273 242 aa18.47■□□□□ 0.55
NUP50-209ENST00000432340 FAM26DQ5JW98 314 aa18.47■□□□□ 0.55
NUP50-209ENST00000432340 ADGRD2Q7Z7M1 963 aa18.47■□□□□ 0.55
NUP50-209ENST00000432340 RSPH3Q86UC2 560 aa18.47■□□□□ 0.55
NUP50-209ENST00000432340 NECTIN4Q96NY8 510 aa18.47■□□□□ 0.55
NUP50-209ENST00000432340 TUT1Q9H6E5 874 aaKnown RBP18.47■□□□□ 0.55
NUP50-209ENST00000432340 GPCPD1Q9NPB8 672 aa18.47■□□□□ 0.55
NUP50-209ENST00000432340 AAASQ9NRG9 546 aa18.47■□□□□ 0.55
NUP50-209ENST00000432340 IL17RBQ9NRM6 502 aa18.47■□□□□ 0.55
NUP50-209ENST00000432340 CACNA1GO43497 2377 aa18.46■□□□□ 0.55
NUP50-209ENST00000432340 PLXNA3P51805 1871 aa18.46■□□□□ 0.55
NUP50-209ENST00000432340 RANBP6O60518 1105 aaKnown RBP18.46■□□□□ 0.55
NUP50-209ENST00000432340 STAG3L1P0CL83 205 aa18.46■□□□□ 0.55
NUP50-209ENST00000432340 SMIM10L2AP0DMW4 78 aa18.46■□□□□ 0.55
NUP50-209ENST00000432340 SMIM10L2BP0DMW5 78 aa18.46■□□□□ 0.55
NUP50-209ENST00000432340 TGFB3P10600 412 aa18.46■□□□□ 0.55
NUP50-209ENST00000432340 SDHBP21912 280 aa18.46■□□□□ 0.55
NUP50-209ENST00000432340 NOVP48745 357 aa18.46■□□□□ 0.55
NUP50-209ENST00000432340 MYSM1Q5VVJ2 828 aa18.46■□□□□ 0.55
NUP50-209ENST00000432340 KLHL23Q8NBE8 558 aa18.46■□□□□ 0.55
NUP50-209ENST00000432340 SYTL5Q8TDW5 730 aaPredicted RBP18.46■□□□□ 0.55
NUP50-209ENST00000432340 ATP8B4Q8TF62 1192 aa18.46■□□□□ 0.55
NUP50-209ENST00000432340 CNTNAP3BQ96NU0 1288 aa18.46■□□□□ 0.55
NUP50-209ENST00000432340 CNTNAP3Q9BZ76 1288 aa18.46■□□□□ 0.55
NUP50-209ENST00000432340 PCDHGC5Q9Y5F6 944 aa18.46■□□□□ 0.55
NUP50-209ENST00000432340 ABCB11O95342 1321 aa18.46■□□□□ 0.55
NUP50-209ENST00000432340 MYH4Q9Y623 1939 aa18.45■□□□□ 0.54
NUP50-209ENST00000432340 TREHO43280 583 aa18.45■□□□□ 0.54
NUP50-209ENST00000432340 USH1GQ495M9 461 aa18.45■□□□□ 0.54
NUP50-209ENST00000432340 CELF3Q5SZQ8 465 aaKnown RBP18.45■□□□□ 0.54
NUP50-209ENST00000432340 TMEM184AQ6ZMB5 413 aa18.45■□□□□ 0.54
NUP50-209ENST00000432340 GPATCH3Q96I76 525 aa18.45■□□□□ 0.54
NUP50-209ENST00000432340 C16orf70Q9BSU1 422 aa18.45■□□□□ 0.54
NUP50-209ENST00000432340 USP26Q9BXU7 913 aa18.45■□□□□ 0.54
NUP50-209ENST00000432340 MLXIPQ9HAP2 919 aa18.45■□□□□ 0.54
NUP50-209ENST00000432340 PCDHB12Q9Y5F1 795 aa18.45■□□□□ 0.54
NUP50-209ENST00000432340 MRPL42Q9Y6G3 142 aaKnown RBP18.45■□□□□ 0.54
NUP50-209ENST00000432340 FRMPD2Q68DX3 1309 aaPredicted RBP18.45■□□□□ 0.54
NUP50-209ENST00000432340 CCDC171Q6TFL3 1326 aa18.45■□□□□ 0.54
NUP50-209ENST00000432340 RALGAPA2Q2PPJ7 1873 aa18.44■□□□□ 0.54
NUP50-209ENST00000432340 NCOR2Q9Y618 2525 aa18.44■□□□□ 0.54
NUP50-209ENST00000432340 ENPP3O14638 875 aa18.44■□□□□ 0.54
NUP50-209ENST00000432340 RPLP2P05387 115 aaKnown RBP18.44■□□□□ 0.54
NUP50-209ENST00000432340 NR3C2P08235 984 aa18.44■□□□□ 0.54
NUP50-209ENST00000432340 HIC1Q14526 733 aa18.44■□□□□ 0.54
NUP50-209ENST00000432340 GPATCH4Q5T3I0 446 aaKnown RBP18.44■□□□□ 0.54
NUP50-209ENST00000432340 CES5AQ6NT32 575 aa18.44■□□□□ 0.54
NUP50-209ENST00000432340 TAF2Q6P1X5 1199 aa18.44■□□□□ 0.54
NUP50-209ENST00000432340 TAAR1Q96RJ0 339 aa18.44■□□□□ 0.54
NUP50-209ENST00000432340 HINFPQ9BQA5 517 aa18.44■□□□□ 0.54
NUP50-209ENST00000432340 RTP3Q9BQQ7 232 aa18.44■□□□□ 0.54
NUP50-209ENST00000432340 FTHL17Q9BXU8 183 aa18.44■□□□□ 0.54
NUP50-209ENST00000432340 RNPEPQ9H4A4 650 aa18.44■□□□□ 0.54
NUP50-209ENST00000432340 TSHZ2Q9NRE2 1034 aa18.44■□□□□ 0.54
NUP50-209ENST00000432340 RNF216Q9NWF9 866 aaPredicted RBP18.44■□□□□ 0.54
NUP50-209ENST00000432340 ZNF215Q9UL58 517 aaPredicted RBP18.44■□□□□ 0.54
NUP50-209ENST00000432340 TRIOO75962 3097 aa18.44■□□□□ 0.54
NUP50-209ENST00000432340 NOP56O00567 594 aaKnown RBP18.43■□□□□ 0.54
NUP50-209ENST00000432340 NMT2O60551 498 aa18.43■□□□□ 0.54
NUP50-209ENST00000432340 GGPS1O95749 300 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms