RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 PHOSPHO2Q8TCD6 241 aa16.47■□□□□ 0.23
SMARCE1-205ENST00000431889 NOP56O00567 594 aaKnown RBP16.46■□□□□ 0.23
SMARCE1-205ENST00000431889 BAIAP3O94812 1187 aa16.46■□□□□ 0.23
SMARCE1-205ENST00000431889 SMIM10L2AP0DMW4 78 aa16.46■□□□□ 0.23
SMARCE1-205ENST00000431889 SMIM10L2BP0DMW5 78 aa16.46■□□□□ 0.23
SMARCE1-205ENST00000431889 CTCFLQ8NI51 663 aaPredicted RBP16.46■□□□□ 0.23
SMARCE1-205ENST00000431889 ATP6V0A1Q93050 837 aa16.46■□□□□ 0.23
SMARCE1-205ENST00000431889 MAF1Q9H063 256 aa16.46■□□□□ 0.23
SMARCE1-205ENST00000431889 LSG1Q9H089 658 aaKnown RBP16.46■□□□□ 0.23
SMARCE1-205ENST00000431889 SETD4Q9NVD3 440 aa16.46■□□□□ 0.23
SMARCE1-205ENST00000431889 TTC28Q96AY4 2481 aa16.45■□□□□ 0.22
SMARCE1-205ENST00000431889 C17orf102A2RUQ5 167 aa16.45■□□□□ 0.22
SMARCE1-205ENST00000431889 H3BRB1 525 aa16.45■□□□□ 0.22
SMARCE1-205ENST00000431889 SLC27A2O14975 620 aa16.45■□□□□ 0.22
SMARCE1-205ENST00000431889 CXCL10P02778 98 aa16.45■□□□□ 0.22
SMARCE1-205ENST00000431889 CASC1Q6TDU7 716 aa16.45■□□□□ 0.22
SMARCE1-205ENST00000431889 IL27Q8NEV9 243 aa16.45■□□□□ 0.22
SMARCE1-205ENST00000431889 DBF4BQ8NFT6 615 aa16.45■□□□□ 0.22
SMARCE1-205ENST00000431889 RRP36Q96EU6 259 aaKnown RBP16.45■□□□□ 0.22
SMARCE1-205ENST00000431889 TCEANC2Q96MN5 208 aa16.45■□□□□ 0.22
SMARCE1-205ENST00000431889 UHRF1Q96T88 793 aaPredicted RBP16.45■□□□□ 0.22
SMARCE1-205ENST00000431889 RNPEPQ9H4A4 650 aa16.45■□□□□ 0.22
SMARCE1-205ENST00000431889 TUT1Q9H6E5 874 aaKnown RBP16.45■□□□□ 0.22
SMARCE1-205ENST00000431889 MAP3K20Q9NYL2 800 aaKnown RBP16.45■□□□□ 0.22
SMARCE1-205ENST00000431889 CCDC69A6NI79 296 aa16.44■□□□□ 0.22
SMARCE1-205ENST00000431889 SH2B2O14492 632 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-205ENST00000431889 MEIS2O14770 477 aa16.44■□□□□ 0.22
SMARCE1-205ENST00000431889 GTPBP6O43824 516 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-205ENST00000431889 LPXNO60711 386 aa16.44■□□□□ 0.22
SMARCE1-205ENST00000431889 HOXD8P13378 290 aaPredicted RBP16.44■□□□□ 0.22
SMARCE1-205ENST00000431889 KCNV1Q6PIU1 500 aa16.44■□□□□ 0.22
SMARCE1-205ENST00000431889 MYOCDQ8IZQ8 938 aa16.44■□□□□ 0.22
SMARCE1-205ENST00000431889 ZBTB10Q96DT7 871 aa16.44■□□□□ 0.22
SMARCE1-205ENST00000431889 GPR20Q99678 358 aa16.44■□□□□ 0.22
SMARCE1-205ENST00000431889 MICAL3Q7RTP6 2002 aa16.44■□□□□ 0.22
SMARCE1-205ENST00000431889 RSPH10B2B2RC85 870 aa16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 SPATA31C2B4DYI2 1134 aa16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 UPP2O95045 317 aa16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 RSPH10BP0C881 870 aa16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 MARK3P27448 753 aa16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 IKBKEQ14164 716 aa16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 SERINC5Q86VE9 423 aa16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 ANO2Q9NQ90 1003 aa16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 ATP9AO75110 1047 aa16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 LGR5O75473 907 aa16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 RBL2Q08999 1139 aa16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 GNPTABQ3T906 1256 aa16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 CREB3L3Q68CJ9 461 aa16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 PGBD1Q96JS3 809 aa16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 INPP4AQ96PE3 977 aaPredicted RBP16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 C17orf80Q9BSJ5 609 aa16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 ESYT1Q9BSJ8 1104 aa16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 TSPYL2Q9H2G4 693 aaPredicted RBP16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 SEC63Q9UGP8 760 aaKnown RBP16.43■□□□□ 0.22
SMARCE1-205ENST00000431889 FRMPD4Q14CM0 1322 aa16.42■□□□□ 0.22
SMARCE1-205ENST00000431889 LINC01553A4QN01 128 aa16.42■□□□□ 0.22
SMARCE1-205ENST00000431889 DDAH1O94760 285 aa16.42■□□□□ 0.22
SMARCE1-205ENST00000431889 GJB5O95377 273 aa16.42■□□□□ 0.22
SMARCE1-205ENST00000431889 TGFB3P10600 412 aa16.42■□□□□ 0.22
SMARCE1-205ENST00000431889 MCM5P33992 734 aa16.42■□□□□ 0.22
SMARCE1-205ENST00000431889 ARHGAP4P98171 946 aa16.42■□□□□ 0.22
SMARCE1-205ENST00000431889 MICU3Q86XE3 530 aa16.42■□□□□ 0.22
SMARCE1-205ENST00000431889 CUL5Q93034 780 aa16.42■□□□□ 0.22
SMARCE1-205ENST00000431889 SPZ1Q9BXG8 430 aa16.42■□□□□ 0.22
SMARCE1-205ENST00000431889 SUGCTQ9HAC7 445 aa16.42■□□□□ 0.22
SMARCE1-205ENST00000431889 SIP14410 1827 aa16.41■□□□□ 0.22
SMARCE1-205ENST00000431889 ABHD14A-ACY1A0A1B0GW23 586 aa16.41■□□□□ 0.22
SMARCE1-205ENST00000431889 FIBPO43427 364 aa16.41■□□□□ 0.22
SMARCE1-205ENST00000431889 BMP1P13497 986 aa16.41■□□□□ 0.22
SMARCE1-205ENST00000431889 ICAM3P32942 547 aa16.41■□□□□ 0.22
SMARCE1-205ENST00000431889 KIF5BP33176 963 aa16.41■□□□□ 0.22
SMARCE1-205ENST00000431889 CACNB1Q02641 598 aaPredicted RBP16.41■□□□□ 0.22
SMARCE1-205ENST00000431889 METTL7BQ6UX53 244 aa16.41■□□□□ 0.22
SMARCE1-205ENST00000431889 RUFY4Q6ZNE9 571 aa16.41■□□□□ 0.22
SMARCE1-205ENST00000431889 HEATR3Q7Z4Q2 680 aa16.41■□□□□ 0.22
SMARCE1-205ENST00000431889 SAMD3Q8N6K7 520 aa16.41■□□□□ 0.22
SMARCE1-205ENST00000431889 UIMC1Q96RL1 719 aa16.41■□□□□ 0.22
SMARCE1-205ENST00000431889 KAT6AQ92794 2004 aa16.4■□□□□ 0.22
SMARCE1-205ENST00000431889 CSPG5O95196 566 aa16.4■□□□□ 0.22
SMARCE1-205ENST00000431889 TRAF1Q13077 416 aa16.4■□□□□ 0.22
SMARCE1-205ENST00000431889 NEDD9Q14511 834 aa16.4■□□□□ 0.22
SMARCE1-205ENST00000431889 PCNX4Q63HM2 1172 aa16.4■□□□□ 0.22
SMARCE1-205ENST00000431889 RAD9AQ99638 391 aa16.4■□□□□ 0.22
SMARCE1-205ENST00000431889 PSTPIP2Q9H939 334 aa16.4■□□□□ 0.22
SMARCE1-205ENST00000431889 ITGB5P18084 799 aa16.39■□□□□ 0.21
SMARCE1-205ENST00000431889 TCF7P36402 384 aaPredicted RBP16.39■□□□□ 0.21
SMARCE1-205ENST00000431889 NECTIN1Q15223 517 aa16.39■□□□□ 0.21
SMARCE1-205ENST00000431889 LMBR1Q8WVP7 490 aa16.39■□□□□ 0.21
SMARCE1-205ENST00000431889 USP26Q9BXU7 913 aa16.39■□□□□ 0.21
SMARCE1-205ENST00000431889 SLC12A7Q9Y666 1083 aa16.39■□□□□ 0.21
SMARCE1-205ENST00000431889 IGBP1P78318 339 aa16.38■□□□□ 0.21
SMARCE1-205ENST00000431889 PLEKHG4Q58EX7 1191 aa16.38■□□□□ 0.21
SMARCE1-205ENST00000431889 TGS1Q96RS0 853 aaKnown RBP16.38■□□□□ 0.21
SMARCE1-205ENST00000431889 PARNO95453 639 aaKnown RBP16.38■□□□□ 0.21
SMARCE1-205ENST00000431889 AMHP03971 560 aa16.38■□□□□ 0.21
SMARCE1-205ENST00000431889 KCNA2P16389 499 aa16.38■□□□□ 0.21
SMARCE1-205ENST00000431889 POU3F3P20264 500 aaPredicted RBP16.38■□□□□ 0.21
SMARCE1-205ENST00000431889 HOXC8P31273 242 aa16.38■□□□□ 0.21
SMARCE1-205ENST00000431889 NLRX1Q86UT6 975 aa16.38■□□□□ 0.21
SMARCE1-205ENST00000431889 CYP2W1Q8TAV3 490 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms