RNA–Protein interactions for RNA: ENST00000430433.5

MRPL55-221, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-221ENST00000430433 HDAC6Q9UBN7 1215 aa12.98□□□□□ -0.33
MRPL55-221ENST00000430433 UBIAD1Q9Y5Z9 338 aa12.98□□□□□ -0.33
MRPL55-221ENST00000430433 ESYT2A0FGR8 921 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 H3BRB1 525 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 HAS3O00219 553 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 LGALS2P05162 132 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 ZNF76P36508 570 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 ANAPC15P60006 121 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 NTRK3Q16288 839 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 PKN1Q16512 942 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 UTP14CQ5TAP6 766 aaKnown RBP12.97□□□□□ -0.33
MRPL55-221ENST00000430433 JAKMIP3Q5VZ66 844 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 CPLX2Q6PUV4 134 aaKnown RBP12.97□□□□□ -0.33
MRPL55-221ENST00000430433 ZNF365Q70YC5 407 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 Q7L0L9 218 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 C16orf59Q7L2K0 433 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 RPUSD2Q8IZ73 545 aaKnown RBP12.97□□□□□ -0.33
MRPL55-221ENST00000430433 REXO1Q8N1G1 1221 aaKnown RBP12.97□□□□□ -0.33
MRPL55-221ENST00000430433 CCDC148Q8NFR7 591 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 ZNF274Q96GC6 653 aaPredicted RBP12.97□□□□□ -0.33
MRPL55-221ENST00000430433 GPR20Q99678 358 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 C16orf70Q9BSU1 422 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 MTIF3Q9H2K0 278 aaKnown RBP12.97□□□□□ -0.33
MRPL55-221ENST00000430433 TUT1Q9H6E5 874 aaKnown RBP12.97□□□□□ -0.33
MRPL55-221ENST00000430433 JADE2Q9NQC1 790 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 GTF2IRD1Q9UHL9 959 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 LAMA3Q16787 3333 aa12.97□□□□□ -0.33
MRPL55-221ENST00000430433 DOCK5Q9H7D0 1870 aa12.96□□□□□ -0.33
MRPL55-221ENST00000430433 FGBP02675 491 aa12.96□□□□□ -0.33
MRPL55-221ENST00000430433 KCNA2P16389 499 aa12.96□□□□□ -0.33
MRPL55-221ENST00000430433 GNA11P29992 359 aa12.96□□□□□ -0.33
MRPL55-221ENST00000430433 SREBF1P36956 1147 aa12.96□□□□□ -0.33
MRPL55-221ENST00000430433 SMAD3P84022 425 aaKnown RBP12.96□□□□□ -0.33
MRPL55-221ENST00000430433 SSRP1Q08945 709 aaKnown RBP12.96□□□□□ -0.33
MRPL55-221ENST00000430433 ZNF697Q5TEC3 545 aa12.96□□□□□ -0.33
MRPL55-221ENST00000430433 MCTP2Q6DN12 878 aa12.96□□□□□ -0.33
MRPL55-221ENST00000430433 DEFB128Q7Z7B8 93 aa12.96□□□□□ -0.33
MRPL55-221ENST00000430433 CAGE1Q8TC20 777 aa12.96□□□□□ -0.33
MRPL55-221ENST00000430433 BICD2Q8TD16 824 aa12.96□□□□□ -0.33
MRPL55-221ENST00000430433 MXRA8Q9BRK3 442 aa12.96□□□□□ -0.33
MRPL55-221ENST00000430433 ZMYND12Q9H0C1 365 aa12.96□□□□□ -0.33
MRPL55-221ENST00000430433 ZNF215Q9UL58 517 aaPredicted RBP12.96□□□□□ -0.33
MRPL55-221ENST00000430433 MAFGO15525 162 aa12.95□□□□□ -0.34
MRPL55-221ENST00000430433 ATP9AO75110 1047 aa12.95□□□□□ -0.34
MRPL55-221ENST00000430433 SMIM10L2AP0DMW4 78 aa12.95□□□□□ -0.34
MRPL55-221ENST00000430433 SMIM10L2BP0DMW5 78 aa12.95□□□□□ -0.34
MRPL55-221ENST00000430433 RFC2P35250 354 aa12.95□□□□□ -0.34
MRPL55-221ENST00000430433 CLK2P49760 499 aaKnown RBP12.95□□□□□ -0.34
MRPL55-221ENST00000430433 ARHGAP4P98171 946 aa12.95□□□□□ -0.34
MRPL55-221ENST00000430433 CEP55Q53EZ4 464 aa12.95□□□□□ -0.34
MRPL55-221ENST00000430433 OTOP2Q7RTS6 562 aa12.95□□□□□ -0.34
MRPL55-221ENST00000430433 TRIM50Q86XT4 487 aa12.95□□□□□ -0.34
MRPL55-221ENST00000430433 HERVK_113Q902F9 699 aa12.95□□□□□ -0.34
MRPL55-221ENST00000430433 SDF4Q9BRK5 362 aa12.95□□□□□ -0.34
MRPL55-221ENST00000430433 KCNH7Q9NS40 1196 aa12.95□□□□□ -0.34
MRPL55-221ENST00000430433 VPS54Q9P1Q0 977 aa12.95□□□□□ -0.34
MRPL55-221ENST00000430433 LAMA2P24043 3122 aaKnown RBP12.94□□□□□ -0.34
MRPL55-221ENST00000430433 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-221ENST00000430433 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-221ENST00000430433 C17orf102A2RUQ5 167 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 ZBBXA8MT70 800 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 CDKL5O76039 1030 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 PFKMP08237 780 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 IQCF3P0C7M6 154 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 TCF7P36402 384 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-221ENST00000430433 NLRP5P59047 1200 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 ZNF200P98182 395 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-221ENST00000430433 PTK7Q13308 1070 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 ANKRD1Q15327 319 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 FAM109BQ6ICB4 259 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-221ENST00000430433 CYP2W1Q8TAV3 490 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 AFAP1L1Q8TED9 768 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 SEPT1Q8WYJ6 367 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 GLG1Q92896 1179 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 ATP6V0A1Q93050 837 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 FAM161BQ96MY7 647 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 CTAGE1Q96RT6 745 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 FTOQ9C0B1 505 aaKnown RBP eCLIP12.94□□□□□ -0.34
MRPL55-221ENST00000430433 SLKQ9H2G2 1235 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-221ENST00000430433 JPH1Q9HDC5 661 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-221ENST00000430433 SH3GLB2Q9NR46 395 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 TELO2Q9Y4R8 837 aa12.94□□□□□ -0.34
MRPL55-221ENST00000430433 MEIS1O00470 390 aa12.93□□□□□ -0.34
MRPL55-221ENST00000430433 DEXIO95424 95 aa12.93□□□□□ -0.34
MRPL55-221ENST00000430433 ARP10275 920 aa12.93□□□□□ -0.34
MRPL55-221ENST00000430433 GNAT1P11488 350 aa12.93□□□□□ -0.34
MRPL55-221ENST00000430433 ACTN1P12814 892 aa12.93□□□□□ -0.34
MRPL55-221ENST00000430433 SELPP16109 830 aa12.93□□□□□ -0.34
MRPL55-221ENST00000430433 RASIP1Q5U651 963 aa12.93□□□□□ -0.34
MRPL55-221ENST00000430433 LRRC8DQ7L1W4 858 aa12.93□□□□□ -0.34
MRPL55-221ENST00000430433 PLA2G4DQ86XP0 818 aa12.93□□□□□ -0.34
MRPL55-221ENST00000430433 RASGRP4Q8TDF6 673 aa12.93□□□□□ -0.34
MRPL55-221ENST00000430433 DHX38Q92620 1227 aaKnown RBP12.93□□□□□ -0.34
MRPL55-221ENST00000430433 CXXC1Q9P0U4 656 aaPredicted RBP12.93□□□□□ -0.34
MRPL55-221ENST00000430433 SLC9A2Q9UBY0 812 aa12.93□□□□□ -0.34
MRPL55-221ENST00000430433 SLC4A7Q9Y6M7 1214 aa12.93□□□□□ -0.34
MRPL55-221ENST00000430433 SZT2Q5T011 3432 aa12.93□□□□□ -0.34
MRPL55-221ENST00000430433 TANC1Q9C0D5 1861 aa12.93□□□□□ -0.34
MRPL55-221ENST00000430433 GSTTP1A0A1W2PQM5 241 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms