RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 UAP1Q16222 522 aaPredicted RBP18.7■□□□□ 0.58
SMARCA4-203ENST00000429416 MAPK6Q16659 721 aa18.7■□□□□ 0.58
SMARCA4-203ENST00000429416 BSPRYQ5W0U4 402 aa18.7■□□□□ 0.58
SMARCA4-203ENST00000429416 POTEAQ6S8J7 498 aa18.7■□□□□ 0.58
SMARCA4-203ENST00000429416 NUCKS1Q9H1E3 243 aaKnown RBP18.7■□□□□ 0.58
SMARCA4-203ENST00000429416 PHKA2P46019 1235 aa18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 SLC10A5Q5PT55 438 aa18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 PSPC1Q8WXF1 523 aaKnown RBP18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 NAP1L3Q99457 506 aaPredicted RBP18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 POLR3EQ9NVU0 708 aa18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 MTRF1LQ9UGC7 380 aaKnown RBP18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 IRX5P78411 483 aaPredicted RBP18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 PTK2Q05397 1052 aa18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 CEP57Q86XR8 500 aa18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 POLR2BP30876 1174 aaKnown RBP18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 SYT10Q6XYQ8 523 aa18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 MB21D2Q8IYB1 491 aaPredicted RBP18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 PAXBP1Q9Y5B6 917 aa18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 ITKQ08881 620 aa18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 MIS12Q9H081 205 aa18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 CHGBP05060 677 aa18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 EPSTI1Q96J88 318 aa18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 EMILIN3Q9NT22 766 aa18.69■□□□□ 0.58
SMARCA4-203ENST00000429416 KDM6AO15550 1401 aaPredicted RBP18.68■□□□□ 0.58
SMARCA4-203ENST00000429416 NOLC1Q14978 699 aaKnown RBP eCLIP18.68■□□□□ 0.587e-6■□□□□ 9
SMARCA4-203ENST00000429416 SCYL3Q8IZE3 742 aa18.68■□□□□ 0.58
SMARCA4-203ENST00000429416 CD58P19256 250 aa18.68■□□□□ 0.58
SMARCA4-203ENST00000429416 YY1P25490 414 aa18.68■□□□□ 0.58
SMARCA4-203ENST00000429416 SCARA5Q6ZMJ2 495 aa18.68■□□□□ 0.58
SMARCA4-203ENST00000429416 MCPH1Q8NEM0 835 aa18.68■□□□□ 0.58
SMARCA4-203ENST00000429416 DYDC2Q96IM9 177 aa18.68■□□□□ 0.58
SMARCA4-203ENST00000429416 LMBRD1Q9NUN5 540 aa18.68■□□□□ 0.58
SMARCA4-203ENST00000429416 TLDC2A0PJX2 215 aa18.68■□□□□ 0.58
SMARCA4-203ENST00000429416 TYW5A2RUC4 315 aaKnown RBP18.68■□□□□ 0.58
SMARCA4-203ENST00000429416 TFRCP02786 760 aaKnown RBP18.68■□□□□ 0.58
SMARCA4-203ENST00000429416 FCGRTP55899 365 aa18.68■□□□□ 0.58
SMARCA4-203ENST00000429416 SECISBP2LQ93073 1101 aaKnown RBP18.68■□□□□ 0.58
SMARCA4-203ENST00000429416 ABCD1P33897 745 aa18.68■□□□□ 0.58
SMARCA4-203ENST00000429416 TRIML1Q8N9V2 468 aa18.68■□□□□ 0.58
SMARCA4-203ENST00000429416 GDAQ9Y2T3 454 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 PTF1AQ7RTS3 328 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 NBPF11Q86T75 865 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 TMTC1Q8IUR5 882 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 MRRFQ96E11 262 aaKnown RBP18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 GCNAQ96QF7 691 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 GPR75-ASB3A0A0A6YYF3 556 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 CEP104O60308 925 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 NSFP46459 744 aaKnown RBP18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 MFAP3P55082 362 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 PPP1R18Q6NYC8 613 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 CASC4Q6P4E1 433 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 ZBTB9Q96C00 473 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 TOPORSQ9NS56 1045 aaPredicted RBP18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 NYAP2Q9P242 653 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 CTSHP09668 335 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 PADI6Q6TGC4 694 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 PEX26Q7Z412 305 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 TXNRD3Q86VQ6 643 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 CNOT6LQ96LI5 555 aaKnown RBP18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 CLDN3O15551 220 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 THAP12O43422 761 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 GGPS1O95749 300 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 GSDMBQ8TAX9 411 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 GLIS2Q9BZE0 524 aaPredicted RBP18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 BARHL2Q9NY43 387 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 SLIT1O75093 1534 aa18.67■□□□□ 0.58
SMARCA4-203ENST00000429416 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 RARBP10826 455 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 ANXA13P27216 316 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 DDR1Q08345 913 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 ATG4CQ96DT6 458 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 GSDMAQ96QA5 445 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 PPANQ9NQ55 473 aaKnown RBP18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 SPDYE2BA6NHP3 402 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 POLR3GO15318 223 aaPredicted RBP18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 SPDYE6P0CI01 402 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 ZNF543Q08ER8 600 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 NFIAQ12857 509 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 BFSP1Q12934 665 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 NBPF12Q5TAG4 269 aaPredicted RBP18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 CYFIP1Q7L576 1253 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 IFIH1Q9BYX4 1025 aaKnown RBP18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 MTIF3Q9H2K0 278 aaKnown RBP18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 FANCLQ9NW38 375 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 CDC27P30260 824 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 SFNP31947 248 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 QARSP47897 775 aaKnown RBP18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 HDLBPQ00341 1268 aaKnown RBP18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 PTPROQ16827 1216 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 CCDC26Q8TAB7 109 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 TRIM31Q9BZY9 425 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 FAM107BQ9H098 131 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 RBSNQ9H1K0 784 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 BCL9O00512 1426 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 ADKP55263 362 aaKnown RBP18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 SPECC1LQ69YQ0 1117 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 ERO1BQ86YB8 467 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 LINC00301Q8NCQ3 95 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 FAM20AQ96MK3 541 aa18.66■□□□□ 0.58
SMARCA4-203ENST00000429416 MTRQ99707 1265 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms