RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 TMEM266Q2M3C6 531 aa16.46■□□□□ 0.23
CACTIN-203ENST00000429344 CREG2Q8IUH2 290 aa16.46■□□□□ 0.23
CACTIN-203ENST00000429344 TRIM9Q9C026 710 aa16.46■□□□□ 0.23
CACTIN-203ENST00000429344 TRADDQ15628 312 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 USH1GQ495M9 461 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 PODNQ7Z5L7 613 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 SPICE1Q8N0Z3 855 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 GIMAP8Q8ND71 665 aaPredicted RBP16.45■□□□□ 0.22
CACTIN-203ENST00000429344 LRRC15Q8TF66 581 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 BARHL2Q9NY43 387 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 PCDHA6Q9UN73 950 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 PCDHA8Q9Y5H6 950 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 GOLGB1Q14789 3259 aaKnown RBP16.45■□□□□ 0.22
CACTIN-203ENST00000429344 SETQ01105 290 aaPredicted RBP16.45■□□□□ 0.22
CACTIN-203ENST00000429344 UBE2SQ16763 222 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 TTBK2Q6IQ55 1244 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 ZIM3Q96PE6 472 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 LRP5O75197 1615 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 OR52Z1P0C646 297 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 FAM153BP0C7A2 387 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 SNAP25P60880 206 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 POLR2FP61218 127 aaKnown RBP16.45■□□□□ 0.22
CACTIN-203ENST00000429344 FAM153CQ494X1 144 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 CEP85LQ5SZL2 805 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 NEK8Q86SG6 692 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 CCDC170Q8IYT3 715 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 GLIS3Q8NEA6 775 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 TSGA10Q9BZW7 698 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 TRIM31Q9BZY9 425 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 MTMR4Q9NYA4 1195 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 FAM153AQ9UHL3 310 aa16.45■□□□□ 0.22
CACTIN-203ENST00000429344 POTEMA6NI47 508 aa16.44■□□□□ 0.22
CACTIN-203ENST00000429344 MYO1FO00160 1098 aa16.44■□□□□ 0.22
CACTIN-203ENST00000429344 KLRC4O43908 158 aa16.44■□□□□ 0.22
CACTIN-203ENST00000429344 KRT18P05783 430 aaKnown RBP16.44■□□□□ 0.22
CACTIN-203ENST00000429344 ARL6IP4Q66PJ3 421 aaKnown RBP16.44■□□□□ 0.22
CACTIN-203ENST00000429344 SV2BQ7L1I2 683 aa16.44■□□□□ 0.22
CACTIN-203ENST00000429344 DDX60Q8IY21 1712 aaKnown RBP16.44■□□□□ 0.22
CACTIN-203ENST00000429344 NOX5Q96PH1 765 aa16.44■□□□□ 0.22
CACTIN-203ENST00000429344 CICQ96RK0 1608 aaPredicted RBP16.44■□□□□ 0.22
CACTIN-203ENST00000429344 GOLGA6L10A6NI86 522 aa16.44■□□□□ 0.22
CACTIN-203ENST00000429344 E7EVH7 732 aa16.44■□□□□ 0.22
CACTIN-203ENST00000429344 AARSP49588 968 aaKnown RBP eCLIP16.44■□□□□ 0.223e-6■■■■■ 61.8
CACTIN-203ENST00000429344 AMPD3Q01432 767 aa16.44■□□□□ 0.22
CACTIN-203ENST00000429344 DHTKD1Q96HY7 919 aaPredicted RBP16.44■□□□□ 0.22
CACTIN-203ENST00000429344 SALL4Q9UJQ4 1053 aa16.44■□□□□ 0.22
CACTIN-203ENST00000429344 TARSL2A2RTX5 802 aaKnown RBP16.44■□□□□ 0.22
CACTIN-203ENST00000429344 OR2W6PQ8NHA6 318 aa16.44■□□□□ 0.22
CACTIN-203ENST00000429344 RASSF10A6NK89 507 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 RHOBTB3O94955 611 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 EPHB4P54760 987 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 ICA1Q05084 483 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 CNNM4Q6P4Q7 775 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 POTEDQ86YR6 584 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 TAF4BQ92750 862 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 MTMR8Q96EF0 704 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 SH2D4AQ9H788 454 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 GLI1P08151 1106 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 ZNF76P36508 570 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 IFT88Q13099 833 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 VWA3BQ502W6 1294 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 ADAMTS1Q9UHI8 967 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 MYH10P35580 1976 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 STXBP3O00186 592 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 EIF3HO15372 352 aaKnown RBP eCLIP16.43■□□□□ 0.22
CACTIN-203ENST00000429344 PALMO75781 387 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 TCP1P17987 556 aaKnown RBP16.43■□□□□ 0.22
CACTIN-203ENST00000429344 FECHP22830 423 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 CFAP221Q4G0U5 840 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 TTMPQ5BVD1 217 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 C15orf52Q6ZUT6 534 aaKnown RBP16.43■□□□□ 0.22
CACTIN-203ENST00000429344 ZFPM1Q8IX07 1006 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 TBC1D5Q92609 795 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 KAT2BQ92831 832 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 CSRNP1Q96S65 589 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 RAB34Q9BZG1 259 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 SEMA6BQ9H3T3 888 aa16.43■□□□□ 0.22
CACTIN-203ENST00000429344 ANO9A1A5B4 782 aa16.42■□□□□ 0.22
CACTIN-203ENST00000429344 PALM3A6NDB9 673 aaPredicted RBP16.42■□□□□ 0.22
CACTIN-203ENST00000429344 SMIM23A6NLE4 172 aa16.42■□□□□ 0.22
CACTIN-203ENST00000429344 GOLGA8KD6RF30 607 aa16.42■□□□□ 0.22
CACTIN-203ENST00000429344 PDHBP11177 359 aa16.42■□□□□ 0.22
CACTIN-203ENST00000429344 CALCRLQ16602 461 aa16.42■□□□□ 0.22
CACTIN-203ENST00000429344 TCERG1LQ5VWI1 586 aa16.42■□□□□ 0.22
CACTIN-203ENST00000429344 SNX29Q8TEQ0 813 aa16.42■□□□□ 0.22
CACTIN-203ENST00000429344 MRPL12P52815 198 aaKnown RBP16.42■□□□□ 0.22
CACTIN-203ENST00000429344 PRPF4BQ13523 1007 aaKnown RBP16.42■□□□□ 0.22
CACTIN-203ENST00000429344 SEPT2Q15019 361 aa16.42■□□□□ 0.22
CACTIN-203ENST00000429344 KIAA0753Q2KHM9 967 aa16.42■□□□□ 0.22
CACTIN-203ENST00000429344 SLFN13Q68D06 897 aa16.42■□□□□ 0.22
CACTIN-203ENST00000429344 ADAT2Q7Z6V5 191 aaKnown RBP16.42■□□□□ 0.22
CACTIN-203ENST00000429344 LSM14BQ9BX40 385 aaKnown RBP16.42■□□□□ 0.22
CACTIN-203ENST00000429344 KCNK3O14649 394 aa16.42■□□□□ 0.22
CACTIN-203ENST00000429344 PLSCR1O15162 318 aa16.42■□□□□ 0.22
CACTIN-203ENST00000429344 ASPRV1Q53RT3 343 aa16.42■□□□□ 0.22
CACTIN-203ENST00000429344 HAUS3Q68CZ6 603 aa16.42■□□□□ 0.22
CACTIN-203ENST00000429344 DDX42Q86XP3 938 aaKnown RBP eCLIP16.42■□□□□ 0.22
CACTIN-203ENST00000429344 IFT20Q8IY31 132 aa16.42■□□□□ 0.22
CACTIN-203ENST00000429344 AENQ8WTP8 325 aaKnown RBP16.42■□□□□ 0.22
CACTIN-203ENST00000429344 AP1M1Q9BXS5 423 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms