RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 RFXAPO00287 272 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 MEIS2O14770 477 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 TLL1O43897 1013 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 PARNO95453 639 aaKnown RBP19.67■□□□□ 0.74
TRIM39-209ENST00000428728 CXCL10P02778 98 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 SMIM10L2AP0DMW4 78 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 SMIM10L2BP0DMW5 78 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 CALM1P0DP23 149 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 CALM2P0DP24 149 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 CALM3P0DP25 149 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 SMARCA1P28370 1054 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 ICAM3P32942 547 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 LIFRP42702 1097 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 TJAP1Q5JTD0 557 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 PCNX4Q63HM2 1172 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 TRIM50Q86XT4 487 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 CCDC82Q8N4S0 544 aa19.67■□□□□ 0.74
TRIM39-209ENST00000428728 TUT1Q9H6E5 874 aaKnown RBP19.67■□□□□ 0.74
TRIM39-209ENST00000428728 C17orf102A2RUQ5 167 aa19.66■□□□□ 0.74
TRIM39-209ENST00000428728 EPOPA6NHQ4 379 aa19.66■□□□□ 0.74
TRIM39-209ENST00000428728 SPATA31C2B4DYI2 1134 aa19.66■□□□□ 0.74
TRIM39-209ENST00000428728 PIK3CDO00329 1044 aa19.66■□□□□ 0.74
TRIM39-209ENST00000428728 THPOP40225 353 aa19.66■□□□□ 0.74
TRIM39-209ENST00000428728 TAP1Q03518 808 aa19.66■□□□□ 0.74
TRIM39-209ENST00000428728 NEDD9Q14511 834 aa19.66■□□□□ 0.74
TRIM39-209ENST00000428728 BMP2KLQ5H9B9 411 aa19.66■□□□□ 0.74
TRIM39-209ENST00000428728 TRAF7Q6Q0C0 670 aa19.66■□□□□ 0.74
TRIM39-209ENST00000428728 METTL7BQ6UX53 244 aa19.66■□□□□ 0.74
TRIM39-209ENST00000428728 ARNTL2Q8WYA1 636 aa19.66■□□□□ 0.74
TRIM39-209ENST00000428728 SYMPKQ92797 1274 aaKnown RBP19.66■□□□□ 0.74
TRIM39-209ENST00000428728 ATP6V0A1Q93050 837 aa19.66■□□□□ 0.74
TRIM39-209ENST00000428728 TELO2Q9Y4R8 837 aa19.66■□□□□ 0.74
TRIM39-209ENST00000428728 LOXHD1Q8IVV2 1947 aa19.65■□□□□ 0.74
TRIM39-209ENST00000428728 MBTPS1Q14703 1052 aa19.65■□□□□ 0.74
TRIM39-209ENST00000428728 UBE2SQ16763 222 aa19.65■□□□□ 0.74
TRIM39-209ENST00000428728 UTP14CQ5TAP6 766 aaKnown RBP19.65■□□□□ 0.74
TRIM39-209ENST00000428728 TMTC3Q6ZXV5 915 aa19.65■□□□□ 0.74
TRIM39-209ENST00000428728 CENPQQ7L2Z9 268 aaPredicted RBP19.65■□□□□ 0.74
TRIM39-209ENST00000428728 SPRED2Q7Z698 418 aa19.65■□□□□ 0.74
TRIM39-209ENST00000428728 SERINC5Q86VE9 423 aa19.65■□□□□ 0.74
TRIM39-209ENST00000428728 GPR20Q99678 358 aa19.65■□□□□ 0.74
TRIM39-209ENST00000428728 ZBED2Q9BTP6 218 aa19.65■□□□□ 0.74
TRIM39-209ENST00000428728 PSTPIP2Q9H939 334 aa19.65■□□□□ 0.74
TRIM39-209ENST00000428728 LCHNA4D1U4 455 aa19.64■□□□□ 0.73
TRIM39-209ENST00000428728 RNF20Q5VTR2 975 aa19.64■□□□□ 0.73
TRIM39-209ENST00000428728 HEATR3Q7Z4Q2 680 aa19.64■□□□□ 0.73
TRIM39-209ENST00000428728 NLRX1Q86UT6 975 aa19.64■□□□□ 0.73
TRIM39-209ENST00000428728 TCEANC2Q96MN5 208 aa19.64■□□□□ 0.73
TRIM39-209ENST00000428728 USP26Q9BXU7 913 aa19.64■□□□□ 0.73
TRIM39-209ENST00000428728 CNTNAP5Q8WYK1 1306 aa19.63■□□□□ 0.73
TRIM39-209ENST00000428728 ABHD14A-ACY1A0A1B0GW23 586 aa19.63■□□□□ 0.73
TRIM39-209ENST00000428728 TREHO43280 583 aa19.63■□□□□ 0.73
TRIM39-209ENST00000428728 GTPBP6O43824 516 aaPredicted RBP19.63■□□□□ 0.73
TRIM39-209ENST00000428728 LGR5O75473 907 aa19.63■□□□□ 0.73
TRIM39-209ENST00000428728 CTSHP09668 335 aa19.63■□□□□ 0.73
TRIM39-209ENST00000428728 KRT40Q6A162 431 aa19.63■□□□□ 0.73
TRIM39-209ENST00000428728 FAM117BQ6P1L5 589 aa19.63■□□□□ 0.73
TRIM39-209ENST00000428728 XRRA1Q6P2D8 792 aa19.63■□□□□ 0.73
TRIM39-209ENST00000428728 FANCBQ8NB91 859 aa19.63■□□□□ 0.73
TRIM39-209ENST00000428728 RNPEPQ9H4A4 650 aa19.63■□□□□ 0.73
TRIM39-209ENST00000428728 PKD2L1Q9P0L9 805 aa19.63■□□□□ 0.73
TRIM39-209ENST00000428728 ZNF215Q9UL58 517 aaPredicted RBP19.63■□□□□ 0.73
TRIM39-209ENST00000428728 EMSYQ7Z589 1322 aa19.62■□□□□ 0.73
TRIM39-209ENST00000428728 RSPH10B2B2RC85 870 aa19.62■□□□□ 0.73
TRIM39-209ENST00000428728 RSPH10BP0C881 870 aa19.62■□□□□ 0.73
TRIM39-209ENST00000428728 HOXC8P31273 242 aa19.62■□□□□ 0.73
TRIM39-209ENST00000428728 IKBKEQ14164 716 aa19.62■□□□□ 0.73
TRIM39-209ENST00000428728 SKIV2LQ15477 1246 aaKnown RBP19.62■□□□□ 0.73
TRIM39-209ENST00000428728 APOA5Q6Q788 366 aa19.62■□□□□ 0.73
TRIM39-209ENST00000428728 SYNE3Q6ZMZ3 975 aa19.62■□□□□ 0.73
TRIM39-209ENST00000428728 SGMS1Q86VZ5 419 aa19.62■□□□□ 0.73
TRIM39-209ENST00000428728 ATXN2LQ8WWM7 1075 aaKnown RBP19.62■□□□□ 0.73
TRIM39-209ENST00000428728 NEK1Q96PY6 1258 aa19.62■□□□□ 0.73
TRIM39-209ENST00000428728 SETD4Q9NVD3 440 aa19.62■□□□□ 0.73
TRIM39-209ENST00000428728 SPDYE3A6NKU9 549 aa19.61■□□□□ 0.73
TRIM39-209ENST00000428728 EFCAB14O75071 495 aa19.61■□□□□ 0.73
TRIM39-209ENST00000428728 GPRASP2Q96D09 838 aa19.61■□□□□ 0.73
TRIM39-209ENST00000428728 ASB2Q96Q27 587 aa19.61■□□□□ 0.73
TRIM39-209ENST00000428728 SENP7Q9BQF6 1050 aa19.61■□□□□ 0.73
TRIM39-209ENST00000428728 TSPYL2Q9H2G4 693 aaPredicted RBP19.61■□□□□ 0.73
TRIM39-209ENST00000428728 MTCH2Q9Y6C9 303 aa19.61■□□□□ 0.73
TRIM39-209ENST00000428728 REV3LO60673 3130 aa19.6■□□□□ 0.73
TRIM39-209ENST00000428728 CDC45O75419 566 aa19.6■□□□□ 0.73
TRIM39-209ENST00000428728 GJB5O95377 273 aa19.6■□□□□ 0.73
TRIM39-209ENST00000428728 KCNA2P16389 499 aa19.6■□□□□ 0.73
TRIM39-209ENST00000428728 TCF7P36402 384 aaPredicted RBP19.6■□□□□ 0.73
TRIM39-209ENST00000428728 MRPS5P82675 430 aaKnown RBP19.6■□□□□ 0.73
TRIM39-209ENST00000428728 ARHGAP4P98171 946 aa19.6■□□□□ 0.73
TRIM39-209ENST00000428728 WWC2Q6AWC2 1192 aa19.6■□□□□ 0.73
TRIM39-209ENST00000428728 DBF4BQ8NFT6 615 aa19.6■□□□□ 0.73
TRIM39-209ENST00000428728 GDPD5Q8WTR4 605 aa19.6■□□□□ 0.73
TRIM39-209ENST00000428728 LMBR1Q8WVP7 490 aa19.6■□□□□ 0.73
TRIM39-209ENST00000428728 MTUS1Q9ULD2 1270 aa19.6■□□□□ 0.73
TRIM39-209ENST00000428728 RALGAPA2Q2PPJ7 1873 aa19.6■□□□□ 0.73
TRIM39-209ENST00000428728 ATP9AO75110 1047 aa19.59■□□□□ 0.73
TRIM39-209ENST00000428728 GNAT1P11488 350 aa19.59■□□□□ 0.73
TRIM39-209ENST00000428728 ITGB5P18084 799 aa19.59■□□□□ 0.73
TRIM39-209ENST00000428728 GRB10Q13322 594 aa19.59■□□□□ 0.73
TRIM39-209ENST00000428728 MTMR1Q13613 665 aa19.59■□□□□ 0.73
TRIM39-209ENST00000428728 RTN1Q16799 776 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms