RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 AGO4Q9HCK5 861 aaKnown RBP16.53■□□□□ 0.24
SGCE-204ENST00000428696 DDX25Q9UHL0 483 aaKnown RBP16.53■□□□□ 0.24
SGCE-204ENST00000428696 TCEAL9Q9UHQ7 104 aa16.53■□□□□ 0.24
SGCE-204ENST00000428696 IPO5O00410 1097 aaKnown RBP16.52■□□□□ 0.23
SGCE-204ENST00000428696 HSDL1Q3SXM5 330 aa16.52■□□□□ 0.23
SGCE-204ENST00000428696 UTP14CQ5TAP6 766 aaKnown RBP16.52■□□□□ 0.23
SGCE-204ENST00000428696 TSEN34Q9BSV6 310 aaKnown RBP16.52■□□□□ 0.23
SGCE-204ENST00000428696 CTAGE5O15320 804 aa16.51■□□□□ 0.23
SGCE-204ENST00000428696 MMP3P08254 477 aa16.51■□□□□ 0.23
SGCE-204ENST00000428696 KCNA2P16389 499 aa16.51■□□□□ 0.23
SGCE-204ENST00000428696 MNX1P50219 401 aaPredicted RBP16.51■□□□□ 0.23
SGCE-204ENST00000428696 PSMC6P62333 389 aa16.51■□□□□ 0.23
SGCE-204ENST00000428696 SETQ01105 290 aaPredicted RBP16.51■□□□□ 0.23
SGCE-204ENST00000428696 DGKDQ16760 1214 aa16.51■□□□□ 0.23
SGCE-204ENST00000428696 METTL7BQ6UX53 244 aa16.51■□□□□ 0.23
SGCE-204ENST00000428696 NIPA1Q7RTP0 329 aa16.51■□□□□ 0.23
SGCE-204ENST00000428696 NOSTRINQ8IVI9 506 aa16.51■□□□□ 0.23
SGCE-204ENST00000428696 PPP1R13LQ8WUF5 828 aa16.51■□□□□ 0.23
SGCE-204ENST00000428696 CRYGNQ8WXF5 182 aa16.51■□□□□ 0.23
SGCE-204ENST00000428696 TNFRSF25Q93038 417 aa16.51■□□□□ 0.23
SGCE-204ENST00000428696 GJA10Q969M2 543 aa16.51■□□□□ 0.23
SGCE-204ENST00000428696 SENP7Q9BQF6 1050 aa16.51■□□□□ 0.23
SGCE-204ENST00000428696 STARD7Q9NQZ5 370 aa16.51■□□□□ 0.23
SGCE-204ENST00000428696 POLR3EQ9NVU0 708 aa16.51■□□□□ 0.23
SGCE-204ENST00000428696 IGLV3-22A0A075B6J6 115 aa16.5■□□□□ 0.23
SGCE-204ENST00000428696 A0A1W2PQ45 241 aaPredicted RBP16.5■□□□□ 0.23
SGCE-204ENST00000428696 A0A1W2PQY0 241 aa16.5■□□□□ 0.23
SGCE-204ENST00000428696 MOXD2PA6NHM9 499 aa16.5■□□□□ 0.23
SGCE-204ENST00000428696 A6NJR5 290 aa16.5■□□□□ 0.23
SGCE-204ENST00000428696 KIF28PB7ZC32 967 aa16.5■□□□□ 0.23
SGCE-204ENST00000428696 CIITAP33076 1130 aa16.5■□□□□ 0.23
SGCE-204ENST00000428696 FOXD4L5Q5VV16 416 aaPredicted RBP16.5■□□□□ 0.23
SGCE-204ENST00000428696 FERMT3Q86UX7 667 aa16.5■□□□□ 0.23
SGCE-204ENST00000428696 PPTC7Q8NI37 304 aa16.5■□□□□ 0.23
SGCE-204ENST00000428696 FOXD4L4Q8WXT5 416 aaPredicted RBP16.5■□□□□ 0.23
SGCE-204ENST00000428696 NAP1L4Q99733 375 aaKnown RBP16.5■□□□□ 0.23
SGCE-204ENST00000428696 MTG1Q9BT17 334 aaPredicted RBP16.5■□□□□ 0.23
SGCE-204ENST00000428696 JPH1Q9HDC5 661 aaPredicted RBP16.5■□□□□ 0.23
SGCE-204ENST00000428696 NOL7Q9UMY1 257 aaKnown RBP16.5■□□□□ 0.23
SGCE-204ENST00000428696 PHF24Q9UPV7 400 aa16.5■□□□□ 0.23
SGCE-204ENST00000428696 TELO2Q9Y4R8 837 aa16.5■□□□□ 0.23
SGCE-204ENST00000428696 MSH4O15457 936 aa16.49■□□□□ 0.23
SGCE-204ENST00000428696 EDIL3O43854 480 aa16.49■□□□□ 0.23
SGCE-204ENST00000428696 KPNA6O60684 536 aa16.49■□□□□ 0.23
SGCE-204ENST00000428696 ZNF286BP0CG31 522 aa16.49■□□□□ 0.23
SGCE-204ENST00000428696 SYT1P21579 422 aa16.49■□□□□ 0.23
SGCE-204ENST00000428696 CST5P28325 142 aaPredicted RBP16.49■□□□□ 0.23
SGCE-204ENST00000428696 MCM7P33993 719 aa16.49■□□□□ 0.23
SGCE-204ENST00000428696 ITGB3BPQ13352 177 aaPredicted RBP16.49■□□□□ 0.23
SGCE-204ENST00000428696 ZNF174Q15697 407 aa16.49■□□□□ 0.23
SGCE-204ENST00000428696 FAM47CQ5HY64 1035 aa16.49■□□□□ 0.23
SGCE-204ENST00000428696 CCSAPQ6IQ19 270 aaPredicted RBP16.49■□□□□ 0.23
SGCE-204ENST00000428696 HTATIP2Q9BUP3 242 aa16.49■□□□□ 0.23
SGCE-204ENST00000428696 SLC9A2Q9UBY0 812 aa16.49■□□□□ 0.23
SGCE-204ENST00000428696 DAXXQ9UER7 740 aaPredicted RBP16.49■□□□□ 0.23
SGCE-204ENST00000428696 ATP11BQ9Y2G3 1177 aa16.49■□□□□ 0.23
SGCE-204ENST00000428696 SAMM50Q9Y512 469 aa16.49■□□□□ 0.23
SGCE-204ENST00000428696 CHMP2AO43633 222 aa16.48■□□□□ 0.23
SGCE-204ENST00000428696 SLC37A4O43826 429 aa16.48■□□□□ 0.23
SGCE-204ENST00000428696 GAS7O60861 476 aa16.48■□□□□ 0.23
SGCE-204ENST00000428696 PPFIA4O75335 1185 aa16.48■□□□□ 0.23
SGCE-204ENST00000428696 BAG4O95429 457 aaKnown RBP16.48■□□□□ 0.23
SGCE-204ENST00000428696 GCFC2P16383 781 aaKnown RBP16.48■□□□□ 0.23
SGCE-204ENST00000428696 Q4G0T1 1027 aa16.48■□□□□ 0.23
SGCE-204ENST00000428696 LRCH2Q5VUJ6 765 aa16.48■□□□□ 0.23
SGCE-204ENST00000428696 SLC39A5Q6ZMH5 540 aa16.48■□□□□ 0.23
SGCE-204ENST00000428696 SEPT1Q8WYJ6 367 aa16.48■□□□□ 0.23
SGCE-204ENST00000428696 GLG1Q92896 1179 aa16.48■□□□□ 0.23
SGCE-204ENST00000428696 EMID1Q96A84 441 aaPredicted RBP16.48■□□□□ 0.23
SGCE-204ENST00000428696 GPR20Q99678 358 aa16.48■□□□□ 0.23
SGCE-204ENST00000428696 TBC1D22BQ9NU19 505 aa16.48■□□□□ 0.23
SGCE-204ENST00000428696 CYP3A7-CYP3A51PA0A087WV96 503 aa16.47■□□□□ 0.23
SGCE-204ENST00000428696 BACH1O14867 736 aa16.47■□□□□ 0.23
SGCE-204ENST00000428696 CABYRO75952 493 aa16.47■□□□□ 0.23
SGCE-204ENST00000428696 CYP3A7P24462 503 aa16.47■□□□□ 0.23
SGCE-204ENST00000428696 U2AF2P26368 475 aaKnown RBP eCLIP16.47■□□□□ 0.234e-7■■□□□ 11.5
SGCE-204ENST00000428696 TCF7P36402 384 aaPredicted RBP16.47■□□□□ 0.23
SGCE-204ENST00000428696 PURAQ00577 322 aaKnown RBP16.47■□□□□ 0.23
SGCE-204ENST00000428696 MLLT1Q03111 559 aaPredicted RBP16.47■□□□□ 0.23
SGCE-204ENST00000428696 NBR1Q14596 966 aa16.47■□□□□ 0.23
SGCE-204ENST00000428696 PPP4R3AQ6IN85 833 aa16.47■□□□□ 0.23
SGCE-204ENST00000428696 LRRC37A2A6NM11 1700 aa16.47■□□□□ 0.23
SGCE-204ENST00000428696 EVI5O60447 810 aa16.46■□□□□ 0.23
SGCE-204ENST00000428696 NEMFO60524 1076 aa16.46■□□□□ 0.23
SGCE-204ENST00000428696 PQBP1O60828 265 aaKnown RBP16.46■□□□□ 0.23
SGCE-204ENST00000428696 COL6A1P12109 1028 aa16.46■□□□□ 0.23
SGCE-204ENST00000428696 ACTR2P61160 394 aa16.46■□□□□ 0.23
SGCE-204ENST00000428696 NKX3-2P78367 333 aa16.46■□□□□ 0.23
SGCE-204ENST00000428696 ITGA7Q13683 1181 aa16.46■□□□□ 0.23
SGCE-204ENST00000428696 CALCRLQ16602 461 aa16.46■□□□□ 0.23
SGCE-204ENST00000428696 LRRC26Q2I0M4 334 aa16.46■□□□□ 0.23
SGCE-204ENST00000428696 TTC38Q5R3I4 469 aa16.46■□□□□ 0.23
SGCE-204ENST00000428696 TRMT1LQ7Z2T5 733 aaKnown RBP16.46■□□□□ 0.23
SGCE-204ENST00000428696 UBE2Q1Q7Z7E8 422 aa16.46■□□□□ 0.23
SGCE-204ENST00000428696 LENG9Q96B70 501 aa16.46■□□□□ 0.23
SGCE-204ENST00000428696 TEKT3Q9BXF9 490 aa16.46■□□□□ 0.23
SGCE-204ENST00000428696 AZI2Q9H6S1 392 aa16.46■□□□□ 0.23
SGCE-204ENST00000428696 NFASCO94856 1347 aa16.46■□□□□ 0.23
SGCE-204ENST00000428696 WNT7AO00755 349 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 STX6O43752 255 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms