RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 CEP350Q5VT06 3117 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 NFASCO94856 1347 aa14.09□□□□□ -0.15
TRIM39-207ENST00000428404 A0A087X0B3 334 aa14.08□□□□□ -0.16
TRIM39-207ENST00000428404 POTEMA6NI47 508 aa14.08□□□□□ -0.16
TRIM39-207ENST00000428404 SLC26A4O43511 780 aa14.08□□□□□ -0.16
TRIM39-207ENST00000428404 GAS7O60861 476 aa14.08□□□□□ -0.16
TRIM39-207ENST00000428404 ECM2O94769 699 aaPredicted RBP14.08□□□□□ -0.16
TRIM39-207ENST00000428404 SP2Q02086 613 aa14.08□□□□□ -0.16
TRIM39-207ENST00000428404 TPRNQ4KMQ1 711 aa14.08□□□□□ -0.16
TRIM39-207ENST00000428404 KCNV1Q6PIU1 500 aa14.08□□□□□ -0.16
TRIM39-207ENST00000428404 CCDC73Q6ZRK6 1079 aa14.08□□□□□ -0.16
TRIM39-207ENST00000428404 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.08□□□□□ -0.16
TRIM39-207ENST00000428404 FAM13BQ9NYF5 915 aa14.08□□□□□ -0.16
TRIM39-207ENST00000428404 DDX41Q9UJV9 622 aaKnown RBP14.08□□□□□ -0.16
TRIM39-207ENST00000428404 GABRQQ9UN88 632 aa14.08□□□□□ -0.16
TRIM39-207ENST00000428404 LRRC37A2A6NM11 1700 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 EML1O00423 815 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 FKTNO75072 461 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 ZNF202O95125 648 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 GNRH1P01148 92 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 CYP2B6P20813 491 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 UBA7P41226 1012 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 FLT3LGP49771 235 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 CCL14Q16627 93 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 EEPD1Q7L9B9 569 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 FBXO16Q8IX29 292 aaPredicted RBP14.07□□□□□ -0.16
TRIM39-207ENST00000428404 CD99L2Q8TCZ2 262 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 HSD17B14Q9BPX1 270 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 TEKT3Q9BXF9 490 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 UNC45AQ9H3U1 944 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 ABHD16BQ9H3Z7 469 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 BCAS3Q9H6U6 928 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 DACT1Q9NYF0 836 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 STK24Q9Y6E0 443 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 PLXNA1Q9UIW2 1896 aa14.07□□□□□ -0.16
TRIM39-207ENST00000428404 MGAMO43451 1857 aa14.06□□□□□ -0.16
TRIM39-207ENST00000428404 ARIH2O95376 493 aa14.06□□□□□ -0.16
TRIM39-207ENST00000428404 CCNE2O96020 404 aa14.06□□□□□ -0.16
TRIM39-207ENST00000428404 UBA1P22314 1058 aaKnown RBP14.06□□□□□ -0.16
TRIM39-207ENST00000428404 SYKP43405 635 aa14.06□□□□□ -0.16
TRIM39-207ENST00000428404 PRKCZQ05513 592 aa14.06□□□□□ -0.16
TRIM39-207ENST00000428404 E2F4Q16254 413 aa14.06□□□□□ -0.16
TRIM39-207ENST00000428404 HYIQ5T013 277 aa14.06□□□□□ -0.16
TRIM39-207ENST00000428404 ZNF746Q6NUN9 644 aaPredicted RBP14.06□□□□□ -0.16
TRIM39-207ENST00000428404 CABP7Q86V35 215 aa14.06□□□□□ -0.16
TRIM39-207ENST00000428404 GIMAP8Q8ND71 665 aaPredicted RBP14.06□□□□□ -0.16
TRIM39-207ENST00000428404 SCFD2Q8WU76 684 aa14.06□□□□□ -0.16
TRIM39-207ENST00000428404 ZNF296Q8WUU4 475 aaPredicted RBP14.06□□□□□ -0.16
TRIM39-207ENST00000428404 ERO1AQ96HE7 468 aa14.06□□□□□ -0.16
TRIM39-207ENST00000428404 TIGD1Q96MW7 591 aa14.06□□□□□ -0.16
TRIM39-207ENST00000428404 SDF4Q9BRK5 362 aa14.06□□□□□ -0.16
TRIM39-207ENST00000428404 POLR3CQ9BUI4 534 aaPredicted RBP14.06□□□□□ -0.16
TRIM39-207ENST00000428404 PDGFCQ9NRA1 345 aa14.06□□□□□ -0.16
TRIM39-207ENST00000428404 DDX19AQ9NUU7 478 aaKnown RBP14.06□□□□□ -0.16
TRIM39-207ENST00000428404 PKD2L1Q9P0L9 805 aa14.06□□□□□ -0.16
TRIM39-207ENST00000428404 SRRDQ9UH36 339 aa14.06□□□□□ -0.16
TRIM39-207ENST00000428404 POLR2DO15514 142 aaKnown RBP14.05□□□□□ -0.16
TRIM39-207ENST00000428404 ACTN4O43707 911 aaKnown RBP14.05□□□□□ -0.16
TRIM39-207ENST00000428404 SPATA31C1P0DKV0 1188 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 RPA1P27694 616 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 HOXD10P28358 340 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 TXLNAP40222 546 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 KRT76Q01546 638 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 GRB10Q13322 594 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 ACVR2BQ13705 512 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 NEDD9Q14511 834 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 KARSQ15046 597 aaKnown RBP14.05□□□□□ -0.16
TRIM39-207ENST00000428404 EPHA7Q15375 998 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 NAALADL2Q58DX5 795 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 KRT79Q5XKE5 535 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 NCAPH2Q6IBW4 605 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 ELOA2Q8IYF1 753 aaPredicted RBP14.05□□□□□ -0.16
TRIM39-207ENST00000428404 RDM1Q8NG50 284 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 PNMA5Q96PV4 448 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 EIF2AK1Q9BQI3 630 aaKnown RBP14.05□□□□□ -0.16
TRIM39-207ENST00000428404 PYM1Q9BRP8 204 aaKnown RBP14.05□□□□□ -0.16
TRIM39-207ENST00000428404 BEGAINQ9BUH8 593 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 PANK2Q9BZ23 570 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 DISC1Q9NRI5 854 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 SLC9A2Q9UBY0 812 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 USP25Q9UHP3 1055 aa14.05□□□□□ -0.16
TRIM39-207ENST00000428404 ZSWIM8A7E2V4 1837 aa14.04□□□□□ -0.16
TRIM39-207ENST00000428404 KIAA1217Q5T5P2 1943 aa14.04□□□□□ -0.16
TRIM39-207ENST00000428404 MCM3APO60318 1980 aa14.04□□□□□ -0.16
TRIM39-207ENST00000428404 MED24O75448 989 aa14.04□□□□□ -0.16
TRIM39-207ENST00000428404 SLITRK3O94933 977 aa14.04□□□□□ -0.16
TRIM39-207ENST00000428404 ATG7O95352 703 aa14.04□□□□□ -0.16
TRIM39-207ENST00000428404 ZNF865P0CJ78 1059 aaPredicted RBP14.04□□□□□ -0.16
TRIM39-207ENST00000428404 SFNP31947 248 aa14.04□□□□□ -0.16
TRIM39-207ENST00000428404 CYP2C19P33261 490 aa14.04□□□□□ -0.16
TRIM39-207ENST00000428404 TTLL4Q14679 1199 aa14.04□□□□□ -0.16
TRIM39-207ENST00000428404 ARHGEF6Q15052 776 aa14.04□□□□□ -0.16
TRIM39-207ENST00000428404 ECM1Q16610 540 aa14.04□□□□□ -0.16
TRIM39-207ENST00000428404 LY6KQ17RY6 165 aa14.04□□□□□ -0.16
TRIM39-207ENST00000428404 LONRF3Q496Y0 759 aa14.04□□□□□ -0.16
TRIM39-207ENST00000428404 TMEM119Q4V9L6 283 aa14.04□□□□□ -0.16
TRIM39-207ENST00000428404 CELF3Q5SZQ8 465 aaKnown RBP14.04□□□□□ -0.16
TRIM39-207ENST00000428404 IQSEC1Q6DN90 963 aa14.04□□□□□ -0.16
TRIM39-207ENST00000428404 METTL7BQ6UX53 244 aa14.04□□□□□ -0.16
TRIM39-207ENST00000428404 CYFIP1Q7L576 1253 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms