RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 ITIH6Q6UXX5 1313 aa11.58□□□□□ -0.56
HDAC9-210ENST00000428307 ARP10275 920 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 KRT9P35527 623 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 EPS15P42566 896 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 TBC1D8BQ0IIM8 1120 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 PSMD2Q13200 908 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 CTTNQ14247 550 aaKnown RBP11.57□□□□□ -0.56
HDAC9-210ENST00000428307 COBLL1Q53SF7 1204 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 LRCH2Q5VUJ6 765 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 OTOP1Q7RTM1 612 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 REXO1L1PQ8IX06 675 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 NELFCDQ8IXH7 590 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 CCDC65Q8IXS2 484 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 MYOCDQ8IZQ8 938 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 ZNF507Q8TCN5 953 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 PIGOQ8TEQ8 1089 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 NOC4LQ9BVI4 516 aaKnown RBP11.57□□□□□ -0.56
HDAC9-210ENST00000428307 BHMT2Q9H2M3 363 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 RPAP3Q9H6T3 665 aaPredicted RBP11.57□□□□□ -0.56
HDAC9-210ENST00000428307 PKD2L1Q9P0L9 805 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 COL20A1Q9P218 1284 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 DYNC1I1O14576 645 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 ZBTB39O15060 712 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 ZSCAN12O43309 604 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 TPH2Q8IWU9 490 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 ZNF577Q9BSK1 485 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 GGA3Q9NZ52 723 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 ZHX2Q9Y6X8 837 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 ARFGEF1Q9Y6D6 1849 aa11.57□□□□□ -0.56
HDAC9-210ENST00000428307 TTC26A0AVF1 554 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 CCP110O43303 1012 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 PSMD10O75832 226 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 KLK7P49862 253 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 DNM2P50570 870 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 HIRAP54198 1017 aaPredicted RBP11.56□□□□□ -0.56
HDAC9-210ENST00000428307 MUM1L1Q5H9M0 696 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 DCAF15Q66K64 600 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 DLK2Q6UY11 383 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 RAD9BQ6WBX8 426 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 FAM114A1Q8IWE2 563 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 CLEC4DQ8WXI8 215 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 WNK4Q96J92 1243 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 EHMT1Q9H9B1 1298 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 SLC38A10Q9HBR0 1119 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 PICK1Q9NRD5 415 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 ABHD10Q9NUJ1 306 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 GPRC5DQ9NZD1 345 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 DNAI1Q9UI46 699 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 CTDP1Q9Y5B0 961 aaPredicted RBP11.56□□□□□ -0.56
HDAC9-210ENST00000428307 DDX39AO00148 427 aaKnown RBP11.56□□□□□ -0.56
HDAC9-210ENST00000428307 GAS7O60861 476 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 SLITRK3O94933 977 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 SYT2Q8N9I0 419 aaPredicted RBP11.56□□□□□ -0.56
HDAC9-210ENST00000428307 PCMTD1Q96MG8 357 aaPredicted RBP11.56□□□□□ -0.56
HDAC9-210ENST00000428307 HSD17B14Q9BPX1 270 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 REEP2Q9BRK0 252 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 BCAS3Q9H6U6 928 aa11.56□□□□□ -0.56
HDAC9-210ENST00000428307 KIF2AO00139 706 aaPredicted RBP11.55□□□□□ -0.56
HDAC9-210ENST00000428307 TRAF5O00463 557 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 ITGB5P18084 799 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 PTPRAP18433 802 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 GTF2F1P35269 517 aaKnown RBP eCLIP11.55□□□□□ -0.56
HDAC9-210ENST00000428307 HSD17B4P51659 736 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 HMGCS2P54868 508 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 BACE1P56817 501 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 ETF1P62495 437 aaKnown RBP11.55□□□□□ -0.56
HDAC9-210ENST00000428307 GIT2Q14161 759 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 SYCP1Q15431 976 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 MIIPQ5JXC2 388 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 SCYL3Q8IZE3 742 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 ZNF280CQ8ND82 737 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 IL31RAQ8NI17 732 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 UPF1Q92900 1129 aaKnown RBP eCLIP11.55□□□□□ -0.56
HDAC9-210ENST00000428307 SLC5A5Q92911 643 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 DYDC2Q96IM9 177 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 PPP1R9AQ9ULJ8 1098 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 PCDHA2Q9Y5H9 948 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 A0A0U1RQJ8 604 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 A0A1W2PQC6 194 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 SFI1A8K8P3 1242 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 RSPH10B2B2RC85 870 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 IPO5O00410 1097 aaKnown RBP11.55□□□□□ -0.56
HDAC9-210ENST00000428307 RSPH10BP0C881 870 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 TRIM21P19474 475 aaKnown RBP11.55□□□□□ -0.56
HDAC9-210ENST00000428307 CASP5P51878 434 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 LRRC63Q05C16 580 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 TRIM65Q6PJ69 517 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 SCFD1Q8WVM8 642 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 ATRIPQ8WXE1 791 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 ATG4CQ96DT6 458 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 PURBQ96QR8 312 aaKnown RBP11.55□□□□□ -0.56
HDAC9-210ENST00000428307 TSG101Q99816 390 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 POLR3CQ9BUI4 534 aaPredicted RBP11.55□□□□□ -0.56
HDAC9-210ENST00000428307 NAA15Q9BXJ9 866 aaKnown RBP11.55□□□□□ -0.56
HDAC9-210ENST00000428307 WDR11Q9BZH6 1224 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 LUC7L2Q9Y383 392 aaKnown RBP11.55□□□□□ -0.56
HDAC9-210ENST00000428307 RABGAP1Q9Y3P9 1069 aa11.55□□□□□ -0.56
HDAC9-210ENST00000428307 SLC26A4O43511 780 aa11.54□□□□□ -0.56
HDAC9-210ENST00000428307 DDNO94850 711 aaPredicted RBP11.54□□□□□ -0.56
HDAC9-210ENST00000428307 LMNB1P20700 586 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms