RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 MBTPS1Q14703 1052 aa20.09■□□□□ 0.81
DDR1-235ENST00000428153 CASC1Q6TDU7 716 aa20.09■□□□□ 0.81
DDR1-235ENST00000428153 ZNF654Q8IZM8 581 aa20.09■□□□□ 0.81
DDR1-235ENST00000428153 CUL5Q93034 780 aa20.09■□□□□ 0.81
DDR1-235ENST00000428153 WNT8BQ93098 351 aa20.09■□□□□ 0.81
DDR1-235ENST00000428153 RRP36Q96EU6 259 aaKnown RBP20.09■□□□□ 0.81
DDR1-235ENST00000428153 TMEM87BQ96K49 555 aa20.09■□□□□ 0.81
DDR1-235ENST00000428153 CERS4Q9HA82 394 aa20.09■□□□□ 0.81
DDR1-235ENST00000428153 LY9Q9HBG7 655 aa20.09■□□□□ 0.81
DDR1-235ENST00000428153 RBM8AQ9Y5S9 174 aaKnown RBP20.09■□□□□ 0.81
DDR1-235ENST00000428153 RSPH10B2B2RC85 870 aa20.08■□□□□ 0.81
DDR1-235ENST00000428153 LPXNO60711 386 aa20.08■□□□□ 0.81
DDR1-235ENST00000428153 RSPH10BP0C881 870 aa20.08■□□□□ 0.81
DDR1-235ENST00000428153 ERVK-21P61565 698 aa20.08■□□□□ 0.81
DDR1-235ENST00000428153 ZNF200P98182 395 aaPredicted RBP20.08■□□□□ 0.81
DDR1-235ENST00000428153 GRB10Q13322 594 aa20.08■□□□□ 0.81
DDR1-235ENST00000428153 HIC1Q14526 733 aa20.08■□□□□ 0.81
DDR1-235ENST00000428153 PCNX4Q63HM2 1172 aa20.08■□□□□ 0.81
DDR1-235ENST00000428153 GIMAP8Q8ND71 665 aaPredicted RBP20.08■□□□□ 0.81
DDR1-235ENST00000428153 GPKOWQ92917 476 aaPredicted RBP eCLIP20.08■□□□□ 0.81
DDR1-235ENST00000428153 ATP6V0A1Q93050 837 aa20.08■□□□□ 0.81
DDR1-235ENST00000428153 TGS1Q96RS0 853 aaKnown RBP20.08■□□□□ 0.81
DDR1-235ENST00000428153 SEC63Q9UGP8 760 aaKnown RBP20.08■□□□□ 0.81
DDR1-235ENST00000428153 ZNF215Q9UL58 517 aaPredicted RBP20.08■□□□□ 0.81
DDR1-235ENST00000428153 SMIM10L2AP0DMW4 78 aa20.07■□□□□ 0.8
DDR1-235ENST00000428153 SMIM10L2BP0DMW5 78 aa20.07■□□□□ 0.8
DDR1-235ENST00000428153 MCM5P33992 734 aa20.07■□□□□ 0.8
DDR1-235ENST00000428153 LIFRP42702 1097 aa20.07■□□□□ 0.8
DDR1-235ENST00000428153 SEMA3FQ13275 785 aa20.07■□□□□ 0.8
DDR1-235ENST00000428153 SKIV2LQ15477 1246 aaKnown RBP20.07■□□□□ 0.8
DDR1-235ENST00000428153 PLEKHG4Q58EX7 1191 aa20.07■□□□□ 0.8
DDR1-235ENST00000428153 SMARCC2Q8TAQ2 1214 aa20.07■□□□□ 0.8
DDR1-235ENST00000428153 GPR20Q99678 358 aa20.07■□□□□ 0.8
DDR1-235ENST00000428153 RNPEPQ9H4A4 650 aa20.07■□□□□ 0.8
DDR1-235ENST00000428153 INSL6Q9Y581 213 aa20.07■□□□□ 0.8
DDR1-235ENST00000428153 LCHNA4D1U4 455 aa20.06■□□□□ 0.8
DDR1-235ENST00000428153 MEIS2O14770 477 aa20.06■□□□□ 0.8
DDR1-235ENST00000428153 CALM1P0DP23 149 aa20.06■□□□□ 0.8
DDR1-235ENST00000428153 CALM2P0DP24 149 aa20.06■□□□□ 0.8
DDR1-235ENST00000428153 CALM3P0DP25 149 aa20.06■□□□□ 0.8
DDR1-235ENST00000428153 THPOP40225 353 aa20.06■□□□□ 0.8
DDR1-235ENST00000428153 TCTN1Q2MV58 587 aa20.06■□□□□ 0.8
DDR1-235ENST00000428153 CYFIP1Q7L576 1253 aa20.06■□□□□ 0.8
DDR1-235ENST00000428153 NLRX1Q86UT6 975 aa20.06■□□□□ 0.8
DDR1-235ENST00000428153 TEX2Q8IWB9 1127 aa20.06■□□□□ 0.8
DDR1-235ENST00000428153 DBF4BQ8NFT6 615 aa20.06■□□□□ 0.8
DDR1-235ENST00000428153 CDHR1Q96JP9 859 aa20.06■□□□□ 0.8
DDR1-235ENST00000428153 MICAL3Q7RTP6 2002 aa20.05■□□□□ 0.8
DDR1-235ENST00000428153 LINC01553A4QN01 128 aa20.05■□□□□ 0.8
DDR1-235ENST00000428153 SORBS3O60504 671 aa20.05■□□□□ 0.8
DDR1-235ENST00000428153 AMHP03971 560 aa20.05■□□□□ 0.8
DDR1-235ENST00000428153 HLA-CQ95604 372 aa20.05■□□□□ 0.8
DDR1-235ENST00000428153 BRWD1Q9NSI6 2320 aa20.05■□□□□ 0.8
DDR1-235ENST00000428153 COL4A4P53420 1690 aaPredicted RBP20.04■□□□□ 0.8
DDR1-235ENST00000428153 SH2B2O14492 632 aaPredicted RBP20.04■□□□□ 0.8
DDR1-235ENST00000428153 TREHO43280 583 aa20.04■□□□□ 0.8
DDR1-235ENST00000428153 PRC1O43663 620 aa20.04■□□□□ 0.8
DDR1-235ENST00000428153 ADAM17P78536 824 aa20.04■□□□□ 0.8
DDR1-235ENST00000428153 HTRA4P83105 476 aaPredicted RBP20.04■□□□□ 0.8
DDR1-235ENST00000428153 TFF2Q03403 129 aa20.04■□□□□ 0.8
DDR1-235ENST00000428153 USP17L6PQ6QN14 398 aa20.04■□□□□ 0.8
DDR1-235ENST00000428153 RPAINQ86UA6 219 aa20.04■□□□□ 0.8
DDR1-235ENST00000428153 SP7Q8TDD2 431 aaPredicted RBP20.04■□□□□ 0.8
DDR1-235ENST00000428153 APBB2Q92870 758 aa20.04■□□□□ 0.8
DDR1-235ENST00000428153 GPRASP2Q96D09 838 aa20.04■□□□□ 0.8
DDR1-235ENST00000428153 ZFP91Q96JP5 570 aaPredicted RBP20.04■□□□□ 0.8
DDR1-235ENST00000428153 SAMD11Q96NU1 681 aa20.04■□□□□ 0.8
DDR1-235ENST00000428153 SUGCTQ9HAC7 445 aa20.04■□□□□ 0.8
DDR1-235ENST00000428153 SIP14410 1827 aa20.04■□□□□ 0.8
DDR1-235ENST00000428153 COL4A6Q14031 1691 aa20.03■□□□□ 0.8
DDR1-235ENST00000428153 NRCAMQ92823 1304 aa20.03■□□□□ 0.8
DDR1-235ENST00000428153 CCDC69A6NI79 296 aa20.03■□□□□ 0.8
DDR1-235ENST00000428153 MAFGO15525 162 aa20.03■□□□□ 0.8
DDR1-235ENST00000428153 FAM26DQ5JW98 314 aa20.03■□□□□ 0.8
DDR1-235ENST00000428153 KRT40Q6A162 431 aa20.03■□□□□ 0.8
DDR1-235ENST00000428153 TMCO2Q7Z6W1 182 aaPredicted RBP20.03■□□□□ 0.8
DDR1-235ENST00000428153 SRBD1Q8N5C6 995 aaKnown RBP20.03■□□□□ 0.8
DDR1-235ENST00000428153 SEPT8Q92599 483 aa20.03■□□□□ 0.8
DDR1-235ENST00000428153 LSG1Q9H089 658 aaKnown RBP20.03■□□□□ 0.8
DDR1-235ENST00000428153 BCAS3Q9H6U6 928 aa20.03■□□□□ 0.8
DDR1-235ENST00000428153 RTEL1Q9NZ71 1219 aa20.03■□□□□ 0.8
DDR1-235ENST00000428153 NFXL1Q6ZNB6 911 aa20.02■□□□□ 0.8
DDR1-235ENST00000428153 SPRED2Q7Z698 418 aa20.02■□□□□ 0.8
DDR1-235ENST00000428153 SGMS1Q86VZ5 419 aa20.02■□□□□ 0.8
DDR1-235ENST00000428153 PIBF1Q8WXW3 757 aa20.02■□□□□ 0.8
DDR1-235ENST00000428153 MYL10Q9BUA6 226 aa20.02■□□□□ 0.8
DDR1-235ENST00000428153 PSTPIP2Q9H939 334 aa20.02■□□□□ 0.8
DDR1-235ENST00000428153 NECTIN1Q15223 517 aa20.01■□□□□ 0.79
DDR1-235ENST00000428153 TAF2Q6P1X5 1199 aa20.01■□□□□ 0.79
DDR1-235ENST00000428153 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.01■□□□□ 0.79
DDR1-235ENST00000428153 MYOCDQ8IZQ8 938 aa20.01■□□□□ 0.79
DDR1-235ENST00000428153 GDPD5Q8WTR4 605 aa20.01■□□□□ 0.79
DDR1-235ENST00000428153 TOP1MTQ969P6 601 aa20.01■□□□□ 0.79
DDR1-235ENST00000428153 ESYT1Q9BSJ8 1104 aa20.01■□□□□ 0.79
DDR1-235ENST00000428153 SETD4Q9NVD3 440 aa20.01■□□□□ 0.79
DDR1-235ENST00000428153 TCF20Q9UGU0 1960 aaKnown RBP20.01■□□□□ 0.79
DDR1-235ENST00000428153 KAT6AQ92794 2004 aa20■□□□□ 0.79
DDR1-235ENST00000428153 SLC27A2O14975 620 aa20■□□□□ 0.79
DDR1-235ENST00000428153 PLEKHA8P1O95397 391 aa20■□□□□ 0.79
DDR1-235ENST00000428153 RPLP2P05387 115 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms