RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 TYW1BQ6NUM6 668 aa21.11■□□□□ 0.97
GPC1-205ENST00000427506 AFAP1L1Q8TED9 768 aa21.11■□□□□ 0.97
GPC1-205ENST00000427506 TIFAQ96CG3 184 aa21.11■□□□□ 0.97
GPC1-205ENST00000427506 CDX2Q99626 313 aaPredicted RBP21.11■□□□□ 0.97
GPC1-205ENST00000427506 GPR20Q99678 358 aa21.11■□□□□ 0.97
GPC1-205ENST00000427506 BARHL2Q9NY43 387 aa21.11■□□□□ 0.97
GPC1-205ENST00000427506 SLC4A7Q9Y6M7 1214 aa21.11■□□□□ 0.97
GPC1-205ENST00000427506 MTMR1Q13613 665 aa21.1■□□□□ 0.97
GPC1-205ENST00000427506 UTP14CQ5TAP6 766 aaKnown RBP21.1■□□□□ 0.97
GPC1-205ENST00000427506 FBXL16Q8N461 479 aa21.1■□□□□ 0.97
GPC1-205ENST00000427506 PGBD1Q96JS3 809 aa21.1■□□□□ 0.97
GPC1-205ENST00000427506 CTAGE1Q96RT6 745 aa21.1■□□□□ 0.97
GPC1-205ENST00000427506 PBX4Q9BYU1 374 aa21.1■□□□□ 0.97
GPC1-205ENST00000427506 GLT8D2Q9H1C3 349 aa21.1■□□□□ 0.97
GPC1-205ENST00000427506 PKD2L1Q9P0L9 805 aa21.1■□□□□ 0.97
GPC1-205ENST00000427506 MSRAQ9UJ68 235 aa21.1■□□□□ 0.97
GPC1-205ENST00000427506 UBIAD1Q9Y5Z9 338 aa21.1■□□□□ 0.97
GPC1-205ENST00000427506 C17orf102A2RUQ5 167 aa21.09■□□□□ 0.97
GPC1-205ENST00000427506 FOSP01100 380 aaPredicted RBP21.09■□□□□ 0.97
GPC1-205ENST00000427506 SELPP16109 830 aa21.09■□□□□ 0.97
GPC1-205ENST00000427506 ITGB5P18084 799 aa21.09■□□□□ 0.97
GPC1-205ENST00000427506 PBX2P40425 430 aa21.09■□□□□ 0.97
GPC1-205ENST00000427506 ZNF200P98182 395 aaPredicted RBP21.09■□□□□ 0.97
GPC1-205ENST00000427506 AKAP17AQ02040 695 aaKnown RBP21.09■□□□□ 0.97
GPC1-205ENST00000427506 PTK7Q13308 1070 aa21.09■□□□□ 0.97
GPC1-205ENST00000427506 RUFY3Q7L099 469 aa21.09■□□□□ 0.97
GPC1-205ENST00000427506 LRRC8DQ7L1W4 858 aa21.09■□□□□ 0.97
GPC1-205ENST00000427506 TEX2Q8IWB9 1127 aa21.09■□□□□ 0.97
GPC1-205ENST00000427506 DHX38Q92620 1227 aaKnown RBP21.09■□□□□ 0.97
GPC1-205ENST00000427506 VWCEQ96DN2 955 aa21.09■□□□□ 0.97
GPC1-205ENST00000427506 ZNF215Q9UL58 517 aaPredicted RBP21.09■□□□□ 0.97
GPC1-205ENST00000427506 ATP9AO75110 1047 aa21.08■□□□□ 0.97
GPC1-205ENST00000427506 CKBP12277 381 aa21.08■□□□□ 0.97
GPC1-205ENST00000427506 SCG2P13521 617 aa21.08■□□□□ 0.97
GPC1-205ENST00000427506 RAB30Q15771 203 aa21.08■□□□□ 0.97
GPC1-205ENST00000427506 PFKFB3Q16875 520 aaPredicted RBP21.08■□□□□ 0.97
GPC1-205ENST00000427506 SLC17A8Q8NDX2 589 aa21.08■□□□□ 0.97
GPC1-205ENST00000427506 ANO3Q9BYT9 981 aa21.08■□□□□ 0.97
GPC1-205ENST00000427506 AGXT2Q9BYV1 514 aa21.08■□□□□ 0.97
GPC1-205ENST00000427506 ZNF576Q9H609 170 aa21.08■□□□□ 0.97
GPC1-205ENST00000427506 ZSWIM6Q9HCJ5 1215 aa21.08■□□□□ 0.97
GPC1-205ENST00000427506 JADE2Q9NQC1 790 aa21.08■□□□□ 0.97
GPC1-205ENST00000427506 CYP46A1Q9Y6A2 500 aa21.08■□□□□ 0.97
GPC1-205ENST00000427506 MAFGO15525 162 aa21.07■□□□□ 0.96
GPC1-205ENST00000427506 SMIM10L2AP0DMW4 78 aa21.07■□□□□ 0.96
GPC1-205ENST00000427506 SMIM10L2BP0DMW5 78 aa21.07■□□□□ 0.96
GPC1-205ENST00000427506 KCNA2P16389 499 aa21.07■□□□□ 0.96
GPC1-205ENST00000427506 CCT2P78371 535 aaKnown RBP21.07■□□□□ 0.96
GPC1-205ENST00000427506 MYLIPQ8WY64 445 aa21.07■□□□□ 0.96
GPC1-205ENST00000427506 ATP6V0A1Q93050 837 aa21.07■□□□□ 0.96
GPC1-205ENST00000427506 PHKBQ93100 1093 aa21.07■□□□□ 0.96
GPC1-205ENST00000427506 TMEM260Q9NX78 707 aa21.07■□□□□ 0.96
GPC1-205ENST00000427506 TELO2Q9Y4R8 837 aa21.07■□□□□ 0.96
GPC1-205ENST00000427506 PRPF3O43395 683 aaKnown RBP21.06■□□□□ 0.96
GPC1-205ENST00000427506 PARNO95453 639 aaKnown RBP21.06■□□□□ 0.96
GPC1-205ENST00000427506 ATP2A2P16615 1042 aaKnown RBP21.06■□□□□ 0.96
GPC1-205ENST00000427506 TCF7P36402 384 aaPredicted RBP21.06■□□□□ 0.96
GPC1-205ENST00000427506 ZNF76P36508 570 aa21.06■□□□□ 0.96
GPC1-205ENST00000427506 RBL2Q08999 1139 aa21.06■□□□□ 0.96
GPC1-205ENST00000427506 AP3B2Q13367 1082 aa21.06■□□□□ 0.96
GPC1-205ENST00000427506 HIC1Q14526 733 aa21.06■□□□□ 0.96
GPC1-205ENST00000427506 TRIM50Q86XT4 487 aa21.06■□□□□ 0.96
GPC1-205ENST00000427506 CCDC12Q8WUD4 166 aaPredicted RBP21.06■□□□□ 0.96
GPC1-205ENST00000427506 MXRA8Q9BRK3 442 aa21.06■□□□□ 0.96
GPC1-205ENST00000427506 NID2Q14112 1375 aa21.06■□□□□ 0.96
GPC1-205ENST00000427506 PPFIA3O75145 1194 aa21.05■□□□□ 0.96
GPC1-205ENST00000427506 GNAT1P11488 350 aa21.05■□□□□ 0.96
GPC1-205ENST00000427506 FOSL2P15408 326 aa21.05■□□□□ 0.96
GPC1-205ENST00000427506 PDIA3P30101 505 aaKnown RBP21.05■□□□□ 0.96
GPC1-205ENST00000427506 RABGGTBP53611 331 aa21.05■□□□□ 0.96
GPC1-205ENST00000427506 GRIN2CQ14957 1233 aa21.05■□□□□ 0.96
GPC1-205ENST00000427506 JAKMIP3Q5VZ66 844 aa21.05■□□□□ 0.96
GPC1-205ENST00000427506 SEPT1Q8WYJ6 367 aa21.05■□□□□ 0.96
GPC1-205ENST00000427506 SLC26A6Q9BXS9 759 aa21.05■□□□□ 0.96
GPC1-205ENST00000427506 UPF3BQ9BZI7 483 aaKnown RBP21.05■□□□□ 0.96
GPC1-205ENST00000427506 NKX2-4Q9H2Z4 354 aa21.05■□□□□ 0.96
GPC1-205ENST00000427506 RNPEPQ9H4A4 650 aa21.05■□□□□ 0.96
GPC1-205ENST00000427506 SLC28A3Q9HAS3 691 aa21.05■□□□□ 0.96
GPC1-205ENST00000427506 C6orf50Q9HD87 102 aa21.05■□□□□ 0.96
GPC1-205ENST00000427506 SCN5AQ14524 2016 aa21.04■□□□□ 0.96
GPC1-205ENST00000427506 THPOP40225 353 aa21.04■□□□□ 0.96
GPC1-205ENST00000427506 CLK2P49760 499 aaKnown RBP21.04■□□□□ 0.96
GPC1-205ENST00000427506 TOB2Q14106 344 aaPredicted RBP21.04■□□□□ 0.96
GPC1-205ENST00000427506 ZNF618Q5T7W0 954 aa21.04■□□□□ 0.96
GPC1-205ENST00000427506 SERINC5Q86VE9 423 aa21.04■□□□□ 0.96
GPC1-205ENST00000427506 WNT8BQ93098 351 aa21.04■□□□□ 0.96
GPC1-205ENST00000427506 TM6SF1Q9BZW5 370 aa21.04■□□□□ 0.96
GPC1-205ENST00000427506 NCOA5Q9HCD5 579 aaKnown RBP21.04■□□□□ 0.96
GPC1-205ENST00000427506 KCNH7Q9NS40 1196 aa21.04■□□□□ 0.96
GPC1-205ENST00000427506 SETD4Q9NVD3 440 aa21.04■□□□□ 0.96
GPC1-205ENST00000427506 TANC1Q9C0D5 1861 aa21.04■□□□□ 0.96
GPC1-205ENST00000427506 TREHO43280 583 aa21.03■□□□□ 0.96
GPC1-205ENST00000427506 IFNAR1P17181 557 aa21.03■□□□□ 0.96
GPC1-205ENST00000427506 SREBF1P36956 1147 aa21.03■□□□□ 0.96
GPC1-205ENST00000427506 KCNJ6P48051 423 aa21.03■□□□□ 0.96
GPC1-205ENST00000427506 EVCP57679 992 aa21.03■□□□□ 0.96
GPC1-205ENST00000427506 PKN1Q16512 942 aa21.03■□□□□ 0.96
GPC1-205ENST00000427506 TRIM71Q2Q1W2 868 aaKnown RBP21.03■□□□□ 0.96
GPC1-205ENST00000427506 CEP55Q53EZ4 464 aa21.03■□□□□ 0.96
GPC1-205ENST00000427506 CYP2W1Q8TAV3 490 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms