RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 SNRNP48Q6IEG0 339 aaKnown RBP29.68■■■□□ 2.34
SH3GL3-202ENST00000427482 KCTD17Q8N5Z5 321 aa29.68■■■□□ 2.34
SH3GL3-202ENST00000427482 P2RX5Q93086 422 aa29.68■■■□□ 2.34
SH3GL3-202ENST00000427482 TAAR1Q96RJ0 339 aa29.68■■■□□ 2.34
SH3GL3-202ENST00000427482 ADD3Q9UEY8 706 aaKnown RBP29.68■■■□□ 2.34
SH3GL3-202ENST00000427482 A0A0G2JMZ2 1700 aa29.67■■■□□ 2.34
SH3GL3-202ENST00000427482 ARMCX5Q6P1M9 558 aa29.67■■■□□ 2.34
SH3GL3-202ENST00000427482 GPBP1Q86WP2 473 aa29.67■■■□□ 2.34
SH3GL3-202ENST00000427482 CDCA5Q96FF9 252 aa29.67■■■□□ 2.34
SH3GL3-202ENST00000427482 WDR11Q9BZH6 1224 aa29.67■■■□□ 2.34
SH3GL3-202ENST00000427482 SLC39A2Q9NP94 309 aa29.67■■■□□ 2.34
SH3GL3-202ENST00000427482 DNM3Q9UQ16 869 aa29.67■■■□□ 2.34
SH3GL3-202ENST00000427482 BICDL2A1A5D9 508 aa29.66■■■□□ 2.34
SH3GL3-202ENST00000427482 CYP11B2P19099 503 aa29.66■■■□□ 2.34
SH3GL3-202ENST00000427482 TMEM132BQ14DG7 1078 aa29.66■■■□□ 2.34
SH3GL3-202ENST00000427482 C17orf53Q8N3J3 647 aaPredicted RBP29.66■■■□□ 2.34
SH3GL3-202ENST00000427482 HOXC10Q9NYD6 342 aa29.66■■■□□ 2.34
SH3GL3-202ENST00000427482 UBIAD1Q9Y5Z9 338 aa29.66■■■□□ 2.34
SH3GL3-202ENST00000427482 LOXHD1Q8IVV2 1947 aa29.66■■■□□ 2.34
SH3GL3-202ENST00000427482 SPDYE16A6NNV3 312 aaPredicted RBP29.66■■■□□ 2.34
SH3GL3-202ENST00000427482 CCZ1BP86790 482 aa29.66■■■□□ 2.34
SH3GL3-202ENST00000427482 CCZ1P86791 482 aaPredicted RBP29.66■■■□□ 2.34
SH3GL3-202ENST00000427482 NOLC1Q14978 699 aaKnown RBP eCLIP29.66■■■□□ 2.34
SH3GL3-202ENST00000427482 NSMFQ6X4W1 530 aa29.66■■■□□ 2.34
SH3GL3-202ENST00000427482 TRIM47Q96LD4 638 aa29.66■■■□□ 2.34
SH3GL3-202ENST00000427482 THAP9Q9H5L6 903 aa29.66■■■□□ 2.34
SH3GL3-202ENST00000427482 TUFT1Q9NNX1 390 aa29.66■■■□□ 2.34
SH3GL3-202ENST00000427482 SPTLC3Q9NUV7 552 aa29.66■■■□□ 2.34
SH3GL3-202ENST00000427482 GLTPD2A6NH11 291 aa29.65■■■□□ 2.34
SH3GL3-202ENST00000427482 IPO5O00410 1097 aaKnown RBP29.65■■■□□ 2.34
SH3GL3-202ENST00000427482 PSMC6P62333 389 aa29.65■■■□□ 2.34
SH3GL3-202ENST00000427482 CYP4A11Q02928 519 aa29.65■■■□□ 2.34
SH3GL3-202ENST00000427482 COASYQ13057 564 aa29.65■■■□□ 2.34
SH3GL3-202ENST00000427482 KRT31Q15323 416 aa29.65■■■□□ 2.34
SH3GL3-202ENST00000427482 GPR162Q16538 588 aa29.65■■■□□ 2.34
SH3GL3-202ENST00000427482 TCP11X2Q5H9J9 407 aa29.65■■■□□ 2.34
SH3GL3-202ENST00000427482 B3GNT9Q6UX72 402 aa29.65■■■□□ 2.34
SH3GL3-202ENST00000427482 NOC3LQ8WTT2 800 aaKnown RBP29.65■■■□□ 2.34
SH3GL3-202ENST00000427482 CNKSR2Q8WXI2 1034 aa29.65■■■□□ 2.34
SH3GL3-202ENST00000427482 RIT2Q99578 217 aa29.65■■■□□ 2.34
SH3GL3-202ENST00000427482 DUSP9Q99956 384 aaKnown RBP29.65■■■□□ 2.34
SH3GL3-202ENST00000427482 HSD17B14Q9BPX1 270 aa29.65■■■□□ 2.34
SH3GL3-202ENST00000427482 TEKT3Q9BXF9 490 aa29.65■■■□□ 2.34
SH3GL3-202ENST00000427482 LRRC10BA6NIK2 292 aa29.64■■■□□ 2.34
SH3GL3-202ENST00000427482 KCNJ18B7U540 433 aa29.64■■■□□ 2.34
SH3GL3-202ENST00000427482 NF2P35240 595 aa29.64■■■□□ 2.34
SH3GL3-202ENST00000427482 MRPS9P82933 396 aaKnown RBP29.64■■■□□ 2.34
SH3GL3-202ENST00000427482 KCNJ12Q14500 433 aa29.64■■■□□ 2.34
SH3GL3-202ENST00000427482 PGM5Q15124 567 aa29.64■■■□□ 2.34
SH3GL3-202ENST00000427482 PTPN21Q16825 1174 aa29.64■■■□□ 2.34
SH3GL3-202ENST00000427482 SYT2Q8N9I0 419 aaPredicted RBP29.64■■■□□ 2.34
SH3GL3-202ENST00000427482 TEX13BQ9BXU2 312 aa29.64■■■□□ 2.34
SH3GL3-202ENST00000427482 PANK4Q9NVE7 773 aa29.64■■■□□ 2.34
SH3GL3-202ENST00000427482 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.64■■■□□ 2.34
SH3GL3-202ENST00000427482 SFPQP23246 707 aaKnown RBP eCLIP29.64■■■□□ 2.33
SH3GL3-202ENST00000427482 TBX2Q13207 712 aaPredicted RBP29.64■■■□□ 2.33
SH3GL3-202ENST00000427482 TKFCQ3LXA3 575 aa29.64■■■□□ 2.33
SH3GL3-202ENST00000427482 FILIP1LQ4L180 1135 aa29.64■■■□□ 2.33
SH3GL3-202ENST00000427482 IRF2BP1Q8IU81 584 aa29.64■■■□□ 2.33
SH3GL3-202ENST00000427482 GUF1Q8N442 669 aaKnown RBP29.64■■■□□ 2.33
SH3GL3-202ENST00000427482 ANKRD20A12PQ8NF67 263 aa29.64■■■□□ 2.33
SH3GL3-202ENST00000427482 UNC45AQ9H3U1 944 aa29.64■■■□□ 2.33
SH3GL3-202ENST00000427482 JADE2Q9NQC1 790 aa29.64■■■□□ 2.33
SH3GL3-202ENST00000427482 PXMP2Q9NR77 195 aa29.64■■■□□ 2.33
SH3GL3-202ENST00000427482 KCNH7Q9NS40 1196 aa29.64■■■□□ 2.33
SH3GL3-202ENST00000427482 RGL1Q9NZL6 768 aa29.64■■■□□ 2.33
SH3GL3-202ENST00000427482 CHMP2AO43633 222 aa29.63■■■□□ 2.33
SH3GL3-202ENST00000427482 EIF2AK2P19525 551 aaKnown RBP29.63■■■□□ 2.33
SH3GL3-202ENST00000427482 ARSHQ5FYA8 562 aa29.63■■■□□ 2.33
SH3GL3-202ENST00000427482 SPECC1LQ69YQ0 1117 aa29.63■■■□□ 2.33
SH3GL3-202ENST00000427482 CCDC65Q8IXS2 484 aa29.63■■■□□ 2.33
SH3GL3-202ENST00000427482 RMDN3Q96TC7 470 aa29.63■■■□□ 2.33
SH3GL3-202ENST00000427482 TEX33O43247 280 aa29.62■■■□□ 2.33
SH3GL3-202ENST00000427482 SKILP12757 684 aa29.62■■■□□ 2.33
SH3GL3-202ENST00000427482 PABPC4Q13310 644 aaKnown RBP eCLIP29.62■■■□□ 2.33
SH3GL3-202ENST00000427482 BAATQ14032 418 aaPredicted RBP29.62■■■□□ 2.33
SH3GL3-202ENST00000427482 ANKRD40Q6AI12 368 aa29.62■■■□□ 2.33
SH3GL3-202ENST00000427482 ANKRD13AQ8IZ07 590 aa29.62■■■□□ 2.33
SH3GL3-202ENST00000427482 PDCD2LQ9BRP1 358 aa29.62■■■□□ 2.33
SH3GL3-202ENST00000427482 ELP3Q9H9T3 547 aa29.62■■■□□ 2.33
SH3GL3-202ENST00000427482 LCTP09848 1927 aa29.62■■■□□ 2.33
SH3GL3-202ENST00000427482 FRMD3A2A2Y4 597 aa29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 EYA4O95677 639 aa29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 MUTP22033 750 aa29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 PPATQ06203 517 aa29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 TREML2Q5T2D2 321 aa29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 CENPPQ6IPU0 288 aa29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 DYDC2Q96IM9 177 aa29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 SRRTQ9BXP5 876 aaKnown RBP29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 NPHP3-ACAD11A0A0J9YXS1 232 aa29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 SLITRK3O94933 977 aa29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 EEF1GP26641 437 aaKnown RBP29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 PBX1P40424 430 aa29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 COPB1P53618 953 aaKnown RBP29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 EPHA7Q15375 998 aa29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 CSGALNACT2Q8N6G5 542 aa29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 MAF1Q9H063 256 aa29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 SEMA6BQ9H3T3 888 aa29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 TAF1DQ9H5J8 278 aaPredicted RBP29.61■■■□□ 2.33
SH3GL3-202ENST00000427482 AGO4Q9HCK5 861 aaKnown RBP29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms