RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 VASPP50552 380 aaPredicted RBP10.88□□□□□ -0.67
LSG1-202ENST00000427461 RPS6P62753 249 aaKnown RBP10.88□□□□□ -0.67
LSG1-202ENST00000427461 DGKDQ16760 1214 aa10.88□□□□□ -0.67
LSG1-202ENST00000427461 RNF207Q6ZRF8 634 aa10.88□□□□□ -0.67
LSG1-202ENST00000427461 PKD1L2Q7Z442 2459 aa10.88□□□□□ -0.67
LSG1-202ENST00000427461 CCDC105Q8IYK2 499 aa10.88□□□□□ -0.67
LSG1-202ENST00000427461 ZNF444Q8N0Y2 327 aaPredicted RBP10.88□□□□□ -0.67
LSG1-202ENST00000427461 KLHL23Q8NBE8 558 aa10.88□□□□□ -0.67
LSG1-202ENST00000427461 ATP8B4Q8TF62 1192 aa10.88□□□□□ -0.67
LSG1-202ENST00000427461 CLEC4DQ8WXI8 215 aa10.88□□□□□ -0.67
LSG1-202ENST00000427461 ZNF689Q96CS4 500 aaPredicted RBP10.88□□□□□ -0.67
LSG1-202ENST00000427461 GMCL1Q96IK5 515 aa10.88□□□□□ -0.67
LSG1-202ENST00000427461 PLVAPQ9BX97 442 aa10.88□□□□□ -0.67
LSG1-202ENST00000427461 PUS7LQ9H0K6 701 aaKnown RBP10.88□□□□□ -0.67
LSG1-202ENST00000427461 S1PR5Q9H228 398 aa10.88□□□□□ -0.67
LSG1-202ENST00000427461 IL1RAPL2Q9NP60 686 aa10.88□□□□□ -0.67
LSG1-202ENST00000427461 MRPL42Q9Y6G3 142 aaKnown RBP10.88□□□□□ -0.67
LSG1-202ENST00000427461 C2CD4DB7Z1M9 353 aa10.87□□□□□ -0.67
LSG1-202ENST00000427461 PLA2G6O60733 806 aa10.87□□□□□ -0.67
LSG1-202ENST00000427461 PPFIA3O75145 1194 aa10.87□□□□□ -0.67
LSG1-202ENST00000427461 SLC16A2P36021 539 aa10.87□□□□□ -0.67
LSG1-202ENST00000427461 SBK1Q52WX2 424 aa10.87□□□□□ -0.67
LSG1-202ENST00000427461 TTBK2Q6IQ55 1244 aa10.87□□□□□ -0.67
LSG1-202ENST00000427461 RCSD1Q6JBY9 416 aa10.87□□□□□ -0.67
LSG1-202ENST00000427461 DTWD2Q8NBA8 298 aa10.87□□□□□ -0.67
LSG1-202ENST00000427461 P2RX5Q93086 422 aa10.87□□□□□ -0.67
LSG1-202ENST00000427461 CLUAP1Q96AJ1 413 aa10.87□□□□□ -0.67
LSG1-202ENST00000427461 HAUS7Q99871 368 aa10.87□□□□□ -0.67
LSG1-202ENST00000427461 KATNAL1Q9BW62 490 aa10.87□□□□□ -0.67
LSG1-202ENST00000427461 BCL11AQ9H165 835 aa10.87□□□□□ -0.67
LSG1-202ENST00000427461 SYNPO2Q9UMS6 1093 aa10.87□□□□□ -0.67
LSG1-202ENST00000427461 KIAA1217Q5T5P2 1943 aa10.87□□□□□ -0.67
LSG1-202ENST00000427461 MYH7P12883 1935 aa10.86□□□□□ -0.67
LSG1-202ENST00000427461 TREHO43280 583 aa10.86□□□□□ -0.67
LSG1-202ENST00000427461 SORBS3O60504 671 aa10.86□□□□□ -0.67
LSG1-202ENST00000427461 NPR3P17342 541 aa10.86□□□□□ -0.67
LSG1-202ENST00000427461 AOC1P19801 751 aa10.86□□□□□ -0.67
LSG1-202ENST00000427461 ATXN1P54253 815 aaKnown RBP10.86□□□□□ -0.67
LSG1-202ENST00000427461 SYCE2Q6PIF2 218 aa10.86□□□□□ -0.67
LSG1-202ENST00000427461 ARHGAP45Q92619 1136 aa10.86□□□□□ -0.67
LSG1-202ENST00000427461 ATP6V0A1Q93050 837 aa10.86□□□□□ -0.67
LSG1-202ENST00000427461 CHAMP1Q96JM3 812 aa10.86□□□□□ -0.67
LSG1-202ENST00000427461 NEK1Q96PY6 1258 aa10.86□□□□□ -0.67
LSG1-202ENST00000427461 RANBP17Q9H2T7 1088 aaKnown RBP10.86□□□□□ -0.67
LSG1-202ENST00000427461 EXOC6BQ9Y2D4 811 aa10.86□□□□□ -0.67
LSG1-202ENST00000427461 OTOGLQ3ZCN5 2332 aa10.86□□□□□ -0.67
LSG1-202ENST00000427461 GSG1L2A8MUP6 293 aa10.85□□□□□ -0.67
LSG1-202ENST00000427461 DGKIO75912 1065 aa10.85□□□□□ -0.67
LSG1-202ENST00000427461 TRIM27P14373 513 aa10.85□□□□□ -0.67
LSG1-202ENST00000427461 TECP42680 631 aa10.85□□□□□ -0.67
LSG1-202ENST00000427461 RARSP54136 660 aaKnown RBP10.85□□□□□ -0.67
LSG1-202ENST00000427461 ACAP1Q15027 740 aa10.85□□□□□ -0.67
LSG1-202ENST00000427461 DUSP6Q16828 381 aa10.85□□□□□ -0.67
LSG1-202ENST00000427461 PAN2Q504Q3 1202 aaKnown RBP10.85□□□□□ -0.67
LSG1-202ENST00000427461 DNERQ8NFT8 737 aa10.85□□□□□ -0.67
LSG1-202ENST00000427461 NEDD1Q8NHV4 660 aa10.85□□□□□ -0.67
LSG1-202ENST00000427461 MICAL1Q8TDZ2 1067 aa10.85□□□□□ -0.67
LSG1-202ENST00000427461 RIN2Q8WYP3 895 aaPredicted RBP10.85□□□□□ -0.67
LSG1-202ENST00000427461 RUBCNQ92622 972 aa10.85□□□□□ -0.67
LSG1-202ENST00000427461 MPHOSPH6Q99547 160 aaKnown RBP10.85□□□□□ -0.67
LSG1-202ENST00000427461 BOLA2Q9H3K6 86 aa10.85□□□□□ -0.67
LSG1-202ENST00000427461 SEMA4AQ9H3S1 761 aa10.85□□□□□ -0.67
LSG1-202ENST00000427461 PAG1Q9NWQ8 432 aa10.85□□□□□ -0.67
LSG1-202ENST00000427461 DDX41Q9UJV9 622 aaKnown RBP10.85□□□□□ -0.67
LSG1-202ENST00000427461 SSUH2Q9Y2M2 353 aa10.85□□□□□ -0.67
LSG1-202ENST00000427461 TTC3P53804 2025 aa10.84□□□□□ -0.67
LSG1-202ENST00000427461 DCDC2BA2VCK2 349 aa10.84□□□□□ -0.67
LSG1-202ENST00000427461 ENPP3O14638 875 aa10.84□□□□□ -0.67
LSG1-202ENST00000427461 TSPY3P0CV98 308 aa10.84□□□□□ -0.67
LSG1-202ENST00000427461 TSPY8P0CW00 308 aa10.84□□□□□ -0.67
LSG1-202ENST00000427461 TFAP4Q01664 338 aa10.84□□□□□ -0.67
LSG1-202ENST00000427461 UBE3CQ15386 1083 aa10.84□□□□□ -0.67
LSG1-202ENST00000427461 ANKRD54Q6NXT1 300 aa10.84□□□□□ -0.67
LSG1-202ENST00000427461 LLGL2Q6P1M3 1020 aa10.84□□□□□ -0.67
LSG1-202ENST00000427461 APBB2Q92870 758 aa10.84□□□□□ -0.67
LSG1-202ENST00000427461 STRBPQ96SI9 672 aaKnown RBP10.84□□□□□ -0.67
LSG1-202ENST00000427461 POMKQ9H5K3 350 aa10.84□□□□□ -0.67
LSG1-202ENST00000427461 LIMD1Q9UGP4 676 aa10.84□□□□□ -0.67
LSG1-202ENST00000427461 NR2E1Q9Y466 385 aa10.84□□□□□ -0.67
LSG1-202ENST00000427461 PLIN4Q96Q06 1357 aa10.83□□□□□ -0.68
LSG1-202ENST00000427461 C17orf102A2RUQ5 167 aa10.83□□□□□ -0.68
LSG1-202ENST00000427461 NMT2O60551 498 aa10.83□□□□□ -0.68
LSG1-202ENST00000427461 GHRP10912 638 aa10.83□□□□□ -0.68
LSG1-202ENST00000427461 ERVFC1P60507 584 aa10.83□□□□□ -0.68
LSG1-202ENST00000427461 KCNC3Q14003 757 aa10.83□□□□□ -0.68
LSG1-202ENST00000427461 CCDC96Q2M329 555 aa10.83□□□□□ -0.68
LSG1-202ENST00000427461 NAALADL2Q58DX5 795 aa10.83□□□□□ -0.68
LSG1-202ENST00000427461 KIAA0319Q5VV43 1072 aa10.83□□□□□ -0.68
LSG1-202ENST00000427461 CRIPAKQ8N1N5 446 aa10.83□□□□□ -0.68
LSG1-202ENST00000427461 TMEM57Q8N5G2 664 aa10.83□□□□□ -0.68
LSG1-202ENST00000427461 TBC1D5Q92609 795 aa10.83□□□□□ -0.68
LSG1-202ENST00000427461 TAAR1Q96RJ0 339 aa10.83□□□□□ -0.68
LSG1-202ENST00000427461 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.83□□□□□ -0.68
LSG1-202ENST00000427461 RNPEPQ9H4A4 650 aa10.83□□□□□ -0.68
LSG1-202ENST00000427461 EPB41L4AQ9HCS5 686 aaPredicted RBP10.83□□□□□ -0.68
LSG1-202ENST00000427461 STX8Q9UNK0 236 aa10.83□□□□□ -0.68
LSG1-202ENST00000427461 SUPT16HQ9Y5B9 1047 aaKnown RBP10.83□□□□□ -0.68
LSG1-202ENST00000427461 FANCMQ8IYD8 2048 aa10.82□□□□□ -0.68
LSG1-202ENST00000427461 ADRB1P08588 477 aa10.82□□□□□ -0.68
LSG1-202ENST00000427461 WEE2P0C1S8 567 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms