RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 H3BRB1 525 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 MAFGO15525 162 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 FOSP01100 380 aaPredicted RBP11.67□□□□□ -0.54
COMMD1-202ENST00000427417 LGALS2P05162 132 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 SELPP16109 830 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 PSMA5P28066 241 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 METAP2P50579 478 aaKnown RBP eCLIP11.67□□□□□ -0.54
COMMD1-202ENST00000427417 NAPAP54920 295 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 RBL2Q08999 1139 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 LRRC8DQ7L1W4 858 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 CYFIP1Q7L576 1253 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.67□□□□□ -0.54
COMMD1-202ENST00000427417 USP38Q8NB14 1042 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 CTAGE1Q96RT6 745 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 C16orf70Q9BSU1 422 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 NKX2-4Q9H2Z4 354 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 TUT1Q9H6E5 874 aaKnown RBP11.67□□□□□ -0.54
COMMD1-202ENST00000427417 BCAS3Q9H6U6 928 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 PCDHA6Q9UN73 950 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 YBX2Q9Y2T7 364 aaKnown RBP11.67□□□□□ -0.54
COMMD1-202ENST00000427417 PCDHA8Q9Y5H6 950 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 SNX14Q9Y5W7 946 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 DOCK5Q9H7D0 1870 aa11.67□□□□□ -0.54
COMMD1-202ENST00000427417 UNC80Q8N2C7 3258 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 C17orf102A2RUQ5 167 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 BAIAP3O94812 1187 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 GNAT1P11488 350 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 CKBP12277 381 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 MYOGP15173 224 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 ATP2A2P16615 1042 aaKnown RBP11.66□□□□□ -0.54
COMMD1-202ENST00000427417 ADCY7P51828 1080 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 SEMA3FQ13275 785 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 MTMR1Q13613 665 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 UBE2SQ16763 222 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 WWC2Q6AWC2 1192 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 Q6ZUG5 572 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 FBXL16Q8N461 479 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 PHOSPHO2Q8TCD6 241 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 SLC9A7Q96T83 725 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 GAS2L1Q99501 681 aaPredicted RBP11.66□□□□□ -0.54
COMMD1-202ENST00000427417 GPR20Q99678 358 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 PRDM12Q9H4Q4 367 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 SLC28A3Q9HAS3 691 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 RIC8AQ9NPQ8 531 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 BARHL2Q9NY43 387 aa11.66□□□□□ -0.54
COMMD1-202ENST00000427417 V9GY48 417 aaPredicted RBP11.66□□□□□ -0.54
COMMD1-202ENST00000427417 RPS6KB1P23443 525 aa11.65□□□□□ -0.54
COMMD1-202ENST00000427417 ZNF200P98182 395 aaPredicted RBP11.65□□□□□ -0.54
COMMD1-202ENST00000427417 FUT2Q10981 343 aa11.65□□□□□ -0.54
COMMD1-202ENST00000427417 ERICH6BQ5W0A0 696 aa11.65□□□□□ -0.54
COMMD1-202ENST00000427417 CCDC12Q8WUD4 166 aaPredicted RBP11.65□□□□□ -0.54
COMMD1-202ENST00000427417 DHX38Q92620 1227 aaKnown RBP11.65□□□□□ -0.54
COMMD1-202ENST00000427417 BRF1Q92994 677 aa11.65□□□□□ -0.54
COMMD1-202ENST00000427417 ATP6V0A1Q93050 837 aa11.65□□□□□ -0.54
COMMD1-202ENST00000427417 JADE2Q9NQC1 790 aa11.65□□□□□ -0.54
COMMD1-202ENST00000427417 PCDHA11Q9Y5I1 949 aa11.65□□□□□ -0.54
COMMD1-202ENST00000427417 UBIAD1Q9Y5Z9 338 aa11.65□□□□□ -0.54
COMMD1-202ENST00000427417 SMCO2A6NFE2 343 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 KIF28PB7ZC32 967 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 STXBP3O00186 592 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 EFCAB14O75071 495 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 CAND2O75155 1236 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 SMIM10L2AP0DMW4 78 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 SMIM10L2BP0DMW5 78 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 CPA1P15085 419 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 KCNA2P16389 499 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 ITGB5P18084 799 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 CDC27P30260 824 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 ADD1P35611 737 aaKnown RBP11.64□□□□□ -0.55
COMMD1-202ENST00000427417 KCNJ6P48051 423 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 AKAP17AQ02040 695 aaKnown RBP11.64□□□□□ -0.55
COMMD1-202ENST00000427417 SP4Q02446 784 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 APOBRQ0VD83 1088 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 AP3B2Q13367 1082 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 HIC1Q14526 733 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 PFKFB3Q16875 520 aaPredicted RBP11.64□□□□□ -0.55
COMMD1-202ENST00000427417 MCTP2Q6DN12 878 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 CNKSR3Q6P9H4 555 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 SERINC5Q86VE9 423 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 PPM1EQ8WY54 764 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 SEPT1Q8WYJ6 367 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 WNT8BQ93098 351 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 COL25A1Q9BXS0 654 aaPredicted RBP11.64□□□□□ -0.55
COMMD1-202ENST00000427417 AGXT2Q9BYV1 514 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 PRDM6Q9NQX0 595 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 FAM217BQ9NTX9 383 aaPredicted RBP11.64□□□□□ -0.55
COMMD1-202ENST00000427417 TELO2Q9Y4R8 837 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 PTPRSQ13332 1948 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 NID2Q14112 1375 aa11.64□□□□□ -0.55
COMMD1-202ENST00000427417 PRUNE2Q8WUY3 3088 aa11.63□□□□□ -0.55
COMMD1-202ENST00000427417 EMSYQ7Z589 1322 aa11.63□□□□□ -0.55
COMMD1-202ENST00000427417 CXCL10P02778 98 aa11.63□□□□□ -0.55
COMMD1-202ENST00000427417 SCG2P13521 617 aa11.63□□□□□ -0.55
COMMD1-202ENST00000427417 HOXC8P31273 242 aa11.63□□□□□ -0.55
COMMD1-202ENST00000427417 TCF7P36402 384 aaPredicted RBP11.63□□□□□ -0.55
COMMD1-202ENST00000427417 THPOP40225 353 aa11.63□□□□□ -0.55
COMMD1-202ENST00000427417 ADGRE1Q14246 886 aa11.63□□□□□ -0.55
COMMD1-202ENST00000427417 GPNMBQ14956 572 aa11.63□□□□□ -0.55
COMMD1-202ENST00000427417 TRIM71Q2Q1W2 868 aaKnown RBP11.63□□□□□ -0.55
COMMD1-202ENST00000427417 UTP14CQ5TAP6 766 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms