RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 GAS7O60861 476 aa17.41■□□□□ 0.38
COL11A1-204ENST00000427239 PSMD10O75832 226 aa17.41■□□□□ 0.38
COL11A1-204ENST00000427239 ARIH2O95376 493 aa17.41■□□□□ 0.38
COL11A1-204ENST00000427239 CNGA1P29973 690 aa17.41■□□□□ 0.38
COL11A1-204ENST00000427239 CLEC17AQ6ZS10 378 aa17.41■□□□□ 0.38
COL11A1-204ENST00000427239 DHX37Q8IY37 1157 aaKnown RBP17.41■□□□□ 0.38
COL11A1-204ENST00000427239 SH3TC2Q8TF17 1288 aa17.41■□□□□ 0.38
COL11A1-204ENST00000427239 FERMT2Q96AC1 680 aa17.41■□□□□ 0.38
COL11A1-204ENST00000427239 TTC12Q9H892 705 aaPredicted RBP17.41■□□□□ 0.38
COL11A1-204ENST00000427239 MSCO60682 206 aa17.4■□□□□ 0.38
COL11A1-204ENST00000427239 PPP6R2O75170 966 aa17.4■□□□□ 0.38
COL11A1-204ENST00000427239 SMPD1P17405 629 aa17.4■□□□□ 0.38
COL11A1-204ENST00000427239 UBA1P22314 1058 aaKnown RBP17.4■□□□□ 0.38
COL11A1-204ENST00000427239 ITGB3BPQ13352 177 aaPredicted RBP17.4■□□□□ 0.38
COL11A1-204ENST00000427239 LAMC2Q13753 1193 aa17.4■□□□□ 0.38
COL11A1-204ENST00000427239 PDIA5Q14554 519 aa17.4■□□□□ 0.38
COL11A1-204ENST00000427239 TMEM266Q2M3C6 531 aa17.4■□□□□ 0.38
COL11A1-204ENST00000427239 CELF3Q5SZQ8 465 aaKnown RBP17.4■□□□□ 0.38
COL11A1-204ENST00000427239 METTL7BQ6UX53 244 aa17.4■□□□□ 0.38
COL11A1-204ENST00000427239 EMID1Q96A84 441 aaPredicted RBP17.4■□□□□ 0.38
COL11A1-204ENST00000427239 SPATA32Q96LK8 384 aa17.4■□□□□ 0.38
COL11A1-204ENST00000427239 RAB34Q9BZG1 259 aa17.4■□□□□ 0.38
COL11A1-204ENST00000427239 MLXIPQ9HAP2 919 aa17.4■□□□□ 0.38
COL11A1-204ENST00000427239 TCEAL9Q9UHQ7 104 aa17.4■□□□□ 0.38
COL11A1-204ENST00000427239 MCM3APO60318 1980 aa17.4■□□□□ 0.38
COL11A1-204ENST00000427239 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.39■□□□□ 0.37
COL11A1-204ENST00000427239 DUSP11O75319 330 aaKnown RBP17.39■□□□□ 0.37
COL11A1-204ENST00000427239 GGPS1O95749 300 aa17.39■□□□□ 0.37
COL11A1-204ENST00000427239 GH1P01241 217 aa17.39■□□□□ 0.37
COL11A1-204ENST00000427239 CYFIP1Q7L576 1253 aa17.39■□□□□ 0.37
COL11A1-204ENST00000427239 TEKT3Q9BXF9 490 aa17.39■□□□□ 0.37
COL11A1-204ENST00000427239 PKD2L1Q9P0L9 805 aa17.39■□□□□ 0.37
COL11A1-204ENST00000427239 SLC9A2Q9UBY0 812 aa17.39■□□□□ 0.37
COL11A1-204ENST00000427239 GNEQ9Y223 722 aaKnown RBP17.39■□□□□ 0.37
COL11A1-204ENST00000427239 SRPRBQ9Y5M8 271 aaKnown RBP17.39■□□□□ 0.37
COL11A1-204ENST00000427239 LRRC37A2A6NM11 1700 aa17.39■□□□□ 0.37
COL11A1-204ENST00000427239 CCND3P30281 292 aaPredicted RBP17.38■□□□□ 0.37
COL11A1-204ENST00000427239 FXR2P51116 673 aaKnown RBP eCLIP17.38■□□□□ 0.37
COL11A1-204ENST00000427239 KRT76Q01546 638 aa17.38■□□□□ 0.37
COL11A1-204ENST00000427239 CSPP1Q1MSJ5 1256 aa17.38■□□□□ 0.37
COL11A1-204ENST00000427239 LEO1Q8WVC0 666 aaPredicted RBP17.38■□□□□ 0.37
COL11A1-204ENST00000427239 UIMC1Q96RL1 719 aa17.38■□□□□ 0.37
COL11A1-204ENST00000427239 JPH1Q9HDC5 661 aaPredicted RBP17.38■□□□□ 0.37
COL11A1-204ENST00000427239 KIAA1217Q5T5P2 1943 aa17.38■□□□□ 0.37
COL11A1-204ENST00000427239 FARP2O94887 1054 aaPredicted RBP17.38■□□□□ 0.37
COL11A1-204ENST00000427239 RARBP10826 455 aa17.38■□□□□ 0.37
COL11A1-204ENST00000427239 MARCKSP29966 332 aaPredicted RBP17.38■□□□□ 0.37
COL11A1-204ENST00000427239 TECP42680 631 aa17.38■□□□□ 0.37
COL11A1-204ENST00000427239 PPP2R5CQ13362 524 aa17.38■□□□□ 0.37
COL11A1-204ENST00000427239 ZNF746Q6NUN9 644 aaPredicted RBP17.38■□□□□ 0.37
COL11A1-204ENST00000427239 KRI1Q8N9T8 703 aaKnown RBP17.38■□□□□ 0.37
COL11A1-204ENST00000427239 GJA10Q969M2 543 aa17.38■□□□□ 0.37
COL11A1-204ENST00000427239 CHAMP1Q96JM3 812 aa17.38■□□□□ 0.37
COL11A1-204ENST00000427239 SFNP31947 248 aa17.37■□□□□ 0.37
COL11A1-204ENST00000427239 LONP1P36776 959 aaKnown RBP17.37■□□□□ 0.37
COL11A1-204ENST00000427239 ARHGAP1Q07960 439 aa17.37■□□□□ 0.37
COL11A1-204ENST00000427239 TMEM63BQ5T3F8 832 aa17.37■□□□□ 0.37
COL11A1-204ENST00000427239 B3GNT9Q6UX72 402 aa17.37■□□□□ 0.37
COL11A1-204ENST00000427239 SMAP1Q8IYB5 467 aaPredicted RBP17.37■□□□□ 0.37
COL11A1-204ENST00000427239 IGSF22Q8N9C0 903 aa17.37■□□□□ 0.37
COL11A1-204ENST00000427239 ARMC5Q96C12 935 aa17.37■□□□□ 0.37
COL11A1-204ENST00000427239 GBP4Q96PP9 640 aa17.37■□□□□ 0.37
COL11A1-204ENST00000427239 AP5M1Q9H0R1 490 aa17.37■□□□□ 0.37
COL11A1-204ENST00000427239 BCAS3Q9H6U6 928 aa17.37■□□□□ 0.37
COL11A1-204ENST00000427239 DDX20Q9UHI6 824 aaKnown RBP17.37■□□□□ 0.37
COL11A1-204ENST00000427239 VAV3Q9UKW4 847 aa17.37■□□□□ 0.37
COL11A1-204ENST00000427239 VWA3AA6NCI4 1184 aa17.36■□□□□ 0.37
COL11A1-204ENST00000427239 DYNC1LI2O43237 492 aaPredicted RBP17.36■□□□□ 0.37
COL11A1-204ENST00000427239 ADCY6O43306 1168 aa17.36■□□□□ 0.37
COL11A1-204ENST00000427239 ME1P48163 572 aa17.36■□□□□ 0.37
COL11A1-204ENST00000427239 SPIRE1Q08AE8 756 aa17.36■□□□□ 0.37
COL11A1-204ENST00000427239 BRDTQ58F21 947 aaPredicted RBP17.36■□□□□ 0.37
COL11A1-204ENST00000427239 RDM1Q8NG50 284 aa17.36■□□□□ 0.37
COL11A1-204ENST00000427239 PPTC7Q8NI37 304 aa17.36■□□□□ 0.37
COL11A1-204ENST00000427239 COPS5Q92905 334 aa17.36■□□□□ 0.37
COL11A1-204ENST00000427239 AK8Q96MA6 479 aa17.36■□□□□ 0.37
COL11A1-204ENST00000427239 SPATA33Q96N06 139 aa17.36■□□□□ 0.37
COL11A1-204ENST00000427239 SPC25Q9HBM1 224 aa17.36■□□□□ 0.37
COL11A1-204ENST00000427239 LRWD1Q9UFC0 647 aa17.36■□□□□ 0.37
COL11A1-204ENST00000427239 FBXO2Q9UK22 296 aaPredicted RBP17.36■□□□□ 0.37
COL11A1-204ENST00000427239 STK24Q9Y6E0 443 aa17.36■□□□□ 0.37
COL11A1-204ENST00000427239 ELP1O95163 1332 aa17.36■□□□□ 0.37
COL11A1-204ENST00000427239 NOP56O00567 594 aaKnown RBP17.35■□□□□ 0.37
COL11A1-204ENST00000427239 JAK3P52333 1124 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 IL17AQ16552 155 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 TLK2Q86UE8 772 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 ZNF579Q8NAF0 562 aaKnown RBP17.35■□□□□ 0.37
COL11A1-204ENST00000427239 SEPT1Q8WYJ6 367 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 ZNF333Q96JL9 665 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 UNC45AQ9H3U1 944 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 PCDHA10Q9Y5I2 948 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 A6NJR5 290 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 WDR64B1ANS9 1081 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 DDX39AO00148 427 aaKnown RBP17.35■□□□□ 0.37
COL11A1-204ENST00000427239 CUTAO60888 179 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 PPFIA4O75335 1185 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 ATG7O95352 703 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 CCL5P13501 91 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 CPT1AP50416 773 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 GJA9P57773 515 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms