RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 CYP2C19P33261 490 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 AKAP17AQ02040 695 aaKnown RBP8.52□□□□□ -1.05
LINC01049-201ENST00000426840 CACNB2Q08289 660 aaPredicted RBP8.52□□□□□ -1.05
LINC01049-201ENST00000426840 NR6A1Q15406 480 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 SLC9C1Q4G0N8 1177 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 PKDCCQ504Y2 493 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 PRAMEF19Q5SWL8 479 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 MAP3K21Q5TCX8 1036 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 USP17L6PQ6QN14 398 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 TRIM22Q8IYM9 498 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 MSL3Q8N5Y2 521 aaKnown RBP8.52□□□□□ -1.05
LINC01049-201ENST00000426840 ZNF713Q8N859 430 aaPredicted RBP8.52□□□□□ -1.05
LINC01049-201ENST00000426840 TRPV1Q8NER1 839 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 DNERQ8NFT8 737 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 SMARCC2Q8TAQ2 1214 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 ZNF333Q96JL9 665 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 AIFM3Q96NN9 605 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 LLPHQ9BRT6 129 aaKnown RBP8.52□□□□□ -1.05
LINC01049-201ENST00000426840 TINF2Q9BSI4 451 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 PSTPIP2Q9H939 334 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 ORC3Q9UBD5 711 aaPredicted RBP8.52□□□□□ -1.05
LINC01049-201ENST00000426840 DDX49Q9Y6V7 483 aaKnown RBP8.52□□□□□ -1.05
LINC01049-201ENST00000426840 LCTP09848 1927 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 STK36Q9NRP7 1315 aa8.52□□□□□ -1.05
LINC01049-201ENST00000426840 LOC102724159A0A0B4J2E5 919 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 ESYT2A0FGR8 921 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 ASB14A6NK59 587 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 EDNRBP24530 442 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 ALDH5A1P51649 535 aaPredicted RBP8.51□□□□□ -1.05
LINC01049-201ENST00000426840 MRPL12P52815 198 aaKnown RBP8.51□□□□□ -1.05
LINC01049-201ENST00000426840 NAPAP54920 295 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 AGERQ15109 404 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 PWP2Q15269 919 aaKnown RBP8.51□□□□□ -1.05
LINC01049-201ENST00000426840 MTFR1Q15390 333 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 MFSD14CQ5VZR4 134 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 FCHSD1Q86WN1 690 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 TNS4Q8IZW8 715 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 FOXJ1Q92949 421 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 SNX21Q969T3 373 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 ABHD8Q96I13 439 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 RMDN3Q96TC7 470 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 KATNBL1Q9H079 304 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 ZMYND12Q9H0C1 365 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 HMX1Q9NP08 348 aaPredicted RBP8.51□□□□□ -1.05
LINC01049-201ENST00000426840 RIC8AQ9NPQ8 531 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 SH3GLB2Q9NR46 395 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 PXMP2Q9NR77 195 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 GJB4Q9NTQ9 266 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 VPS54Q9P1Q0 977 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 BIN2Q9UBW5 565 aaPredicted RBP8.51□□□□□ -1.05
LINC01049-201ENST00000426840 ADD3Q9UEY8 706 aaKnown RBP8.51□□□□□ -1.05
LINC01049-201ENST00000426840 SYNGAP1Q96PV0 1343 aa8.51□□□□□ -1.05
LINC01049-201ENST00000426840 MCM3APO60318 1980 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 NR3C2P08235 984 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 ZNF865P0CJ78 1059 aaPredicted RBP8.5□□□□□ -1.05
LINC01049-201ENST00000426840 CYBAP13498 195 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 CCL5P13501 91 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 CCND3P30281 292 aaPredicted RBP8.5□□□□□ -1.05
LINC01049-201ENST00000426840 UBXN2AP68543 259 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 CUL4AQ13619 759 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 ACVR2BQ13705 512 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 NPY5RQ15761 445 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 UBE2SQ16763 222 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 TAPT1Q6NXT6 567 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 ARMCX2Q7L311 632 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 VSIG10LQ86VR7 867 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 TEX2Q8IWB9 1127 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 EPS8L1Q8TE68 723 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 NSUN6Q8TEA1 469 aaKnown RBP8.5□□□□□ -1.05
LINC01049-201ENST00000426840 IWS1Q96ST2 819 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 PDCD2LQ9BRP1 358 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 ALG1Q9BT22 464 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 PHF20Q9BVI0 1012 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 C6orf50Q9HD87 102 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 TMEM260Q9NX78 707 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 TOR4AQ9NXH8 423 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 PCDHA6Q9UN73 950 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 PCDHA8Q9Y5H6 950 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 RPTORQ8N122 1335 aa8.5□□□□□ -1.05
LINC01049-201ENST00000426840 RBM47A0AV96 593 aaKnown RBP8.49□□□□□ -1.05
LINC01049-201ENST00000426840 J3QL48 77 aa8.49□□□□□ -1.05
LINC01049-201ENST00000426840 M0R2N6 131 aa8.49□□□□□ -1.05
LINC01049-201ENST00000426840 EIF2AK2P19525 551 aaKnown RBP8.49□□□□□ -1.05
LINC01049-201ENST00000426840 GNA11P29992 359 aa8.49□□□□□ -1.05
LINC01049-201ENST00000426840 ADCY7P51828 1080 aa8.49□□□□□ -1.05
LINC01049-201ENST00000426840 NLRP5P59047 1200 aa8.49□□□□□ -1.05
LINC01049-201ENST00000426840 PGM5Q15124 567 aa8.49□□□□□ -1.05
LINC01049-201ENST00000426840 ARHGEF16Q5VV41 709 aa8.49□□□□□ -1.05
LINC01049-201ENST00000426840 FAM177A1Q8N128 213 aaPredicted RBP8.49□□□□□ -1.05
LINC01049-201ENST00000426840 IL31RAQ8NI17 732 aa8.49□□□□□ -1.05
LINC01049-201ENST00000426840 SNIP1Q8TAD8 396 aaKnown RBP8.49□□□□□ -1.05
LINC01049-201ENST00000426840 CCDC12Q8WUD4 166 aaPredicted RBP8.49□□□□□ -1.05
LINC01049-201ENST00000426840 WASF1Q92558 559 aa8.49□□□□□ -1.05
LINC01049-201ENST00000426840 CUL5Q93034 780 aa8.49□□□□□ -1.05
LINC01049-201ENST00000426840 GLT8D2Q9H1C3 349 aa8.49□□□□□ -1.05
LINC01049-201ENST00000426840 ABHD16BQ9H3Z7 469 aa8.49□□□□□ -1.05
LINC01049-201ENST00000426840 PAK6Q9NQU5 681 aaPredicted RBP8.49□□□□□ -1.05
LINC01049-201ENST00000426840 PDGFCQ9NRA1 345 aa8.49□□□□□ -1.05
LINC01049-201ENST00000426840 NRBP1Q9UHY1 535 aa8.49□□□□□ -1.05
LINC01049-201ENST00000426840 KCNJ14Q9UNX9 436 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms