RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 GOLGA8NF8WBI6 632 aa19.44■□□□□ 0.7
ARHGEF28-203ENST00000426542 RABGGTAQ92696 567 aa19.44■□□□□ 0.7
ARHGEF28-203ENST00000426542 ARL4AP40617 200 aa19.44■□□□□ 0.7
ARHGEF28-203ENST00000426542 UBE2SQ16763 222 aa19.44■□□□□ 0.7
ARHGEF28-203ENST00000426542 UBN1Q9NPG3 1134 aa19.44■□□□□ 0.7
ARHGEF28-203ENST00000426542 SNCBQ16143 134 aa19.44■□□□□ 0.7
ARHGEF28-203ENST00000426542 SLC12A6Q9UHW9 1150 aa19.44■□□□□ 0.7
ARHGEF28-203ENST00000426542 ZSCAN20P17040 1043 aaPredicted RBP19.44■□□□□ 0.7
ARHGEF28-203ENST00000426542 SLC8A1P32418 973 aa19.44■□□□□ 0.7
ARHGEF28-203ENST00000426542 BASP1P80723 227 aaKnown RBP19.44■□□□□ 0.7
ARHGEF28-203ENST00000426542 KIF23Q02241 960 aaPredicted RBP19.44■□□□□ 0.7
ARHGEF28-203ENST00000426542 A0A087WWV3 80 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 ATXN8OSP0DMR3 200 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 CPSF3Q9UKF6 684 aaKnown RBP19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 PGRMC1O00264 195 aaKnown RBP19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 EPHB4P54760 987 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 NR5A1Q13285 461 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 THOC5Q13769 683 aaKnown RBP19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 USP17L2Q6R6M4 530 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 TMTC3Q6ZXV5 915 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 EEPD1Q7L9B9 569 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 EXOC8Q8IYI6 725 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 SH2B2O14492 632 aaPredicted RBP19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 MX2P20592 715 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 ZKSCAN8Q15776 578 aaPredicted RBP19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 CFAP36Q96G28 342 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 FAM81BQ96LP2 452 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 FTOQ9C0B1 505 aaKnown RBP eCLIP19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 SPDYE2BA6NHP3 402 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 SPDYE6P0CI01 402 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 DDIT3P35638 169 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 OR6B2Q6IFH4 312 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 DYNLL2Q96FJ2 89 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 RWDD2AQ9UIY3 292 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 hCG_1984214I3L0E3 225 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 CD58P19256 250 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 ZNF713Q8N859 430 aaPredicted RBP19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 CALN1Q9BXU9 219 aa19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 PUS7LQ9H0K6 701 aaKnown RBP19.43■□□□□ 0.7
ARHGEF28-203ENST00000426542 PRAMEF22A3QJZ6 481 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 IKBKBO14920 756 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 USP17L8P0C7I0 530 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 LTKP29376 864 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 CDC25AP30304 524 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 CC2D2BQ6DHV5 1058 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 ACRBPQ8NEB7 543 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 INPP1P49441 399 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 FKBP3Q00688 224 aaKnown RBP19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 FAM196AQ6ZSG2 479 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 FNDC3AQ9Y2H6 1198 aaKnown RBP19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 TRIP13Q15645 432 aaPredicted RBP19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 TCP11X2Q5H9J9 407 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 MRPL47Q9HD33 250 aaKnown RBP19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 SERPINB13Q9UIV8 391 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 JRKLQ9Y4A0 524 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 SOWAHDA6NJG2 315 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 GNGT2O14610 69 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 TRIM42Q8IWZ5 723 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 NHEJ1Q9H9Q4 299 aaPredicted RBP19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 EMILIN3Q9NT22 766 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 IFT88Q13099 833 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 SUPT20HL1Q3ZLR7 823 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 TSPYL2Q9H2G4 693 aaPredicted RBP19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 PPP1R9AQ9ULJ8 1098 aa19.42■□□□□ 0.7
ARHGEF28-203ENST00000426542 ZNF233A6NK53 670 aa19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 PLEKHF1Q96S99 279 aa19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 PI16Q6UXB8 463 aa19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 SCARA5Q6ZMJ2 495 aa19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 MRPL46Q9H2W6 279 aaKnown RBP19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 QTRT2Q9H974 415 aaKnown RBP19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 SLFN14P0C7P3 912 aa19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 LRRC4Q9HBW1 653 aa19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 PLA2G4BP0C869 781 aa19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 SCYL3Q8IZE3 742 aa19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 TBK1Q9UHD2 729 aa19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 NVLO15381 856 aaKnown RBP19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 PSAPP07602 524 aa19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 SNAP25P60880 206 aa19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 MYO1EQ12965 1108 aa19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 MIGA2Q7L4E1 593 aa19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 PARVGQ9HBI0 331 aa19.41■□□□□ 0.7
ARHGEF28-203ENST00000426542 UBN2Q6ZU65 1347 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 HEXIM2Q96MH2 286 aaKnown RBP19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 SAMSN1Q9NSI8 373 aaKnown RBP19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 TLK1Q9UKI8 766 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 TPX2Q9ULW0 747 aaKnown RBP19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 PLCG1P19174 1290 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 GCKP35557 465 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 ANKRD20A4Q4UJ75 823 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 ANKRD20A8PQ5CZ79 823 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 ANKRD20A2Q5SQ80 823 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 ANKRD20A1Q5TYW2 823 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 CDHR1Q96JP9 859 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 THAP9Q9H5L6 903 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 ATP8B3O60423 1300 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 RAD17O75943 681 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 EIF4A3P38919 411 aaKnown RBP19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 PHEXP78562 749 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 KIAA1841Q6NSI8 718 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 PPP1R2P3Q6NXS1 205 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms