RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 MMP1P03956 469 aa16.58■□□□□ 0.24
HDAC6-206ENST00000426196 FGRP09769 529 aa16.58■□□□□ 0.24
HDAC6-206ENST00000426196 SNHG28P0DPA3 235 aa16.58■□□□□ 0.24
HDAC6-206ENST00000426196 GTF2F1P35269 517 aaKnown RBP eCLIP16.58■□□□□ 0.243e-6■■■■□ 25.9
HDAC6-206ENST00000426196 CDC37Q16543 378 aaPredicted RBP16.58■□□□□ 0.24
HDAC6-206ENST00000426196 KCNV1Q6PIU1 500 aa16.58■□□□□ 0.24
HDAC6-206ENST00000426196 TBC1D5Q92609 795 aa16.58■□□□□ 0.24
HDAC6-206ENST00000426196 ATOH1Q92858 354 aaPredicted RBP16.58■□□□□ 0.24
HDAC6-206ENST00000426196 TTC14Q96N46 770 aa16.58■□□□□ 0.24
HDAC6-206ENST00000426196 ADGRA3Q8IWK6 1321 aa16.58■□□□□ 0.24
HDAC6-206ENST00000426196 TTC3P53804 2025 aa16.58■□□□□ 0.24
HDAC6-206ENST00000426196 PLXNA3P51805 1871 aa16.57■□□□□ 0.24
HDAC6-206ENST00000426196 TTC41PQ6P2S7 1318 aa16.57■□□□□ 0.24
HDAC6-206ENST00000426196 LINC01565O15544 149 aa16.57■□□□□ 0.24
HDAC6-206ENST00000426196 NR3C2P08235 984 aa16.57■□□□□ 0.24
HDAC6-206ENST00000426196 HNRNPUQ00839 825 aaKnown RBP eCLIP16.57■□□□□ 0.24
HDAC6-206ENST00000426196 SIGLEC14Q08ET2 396 aa16.57■□□□□ 0.24
HDAC6-206ENST00000426196 ADAM15Q13444 863 aa16.57■□□□□ 0.24
HDAC6-206ENST00000426196 HSDL1Q3SXM5 330 aa16.57■□□□□ 0.24
HDAC6-206ENST00000426196 CELF3Q5SZQ8 465 aaKnown RBP16.57■□□□□ 0.24
HDAC6-206ENST00000426196 MYSM1Q5VVJ2 828 aa16.57■□□□□ 0.24
HDAC6-206ENST00000426196 MSLNLQ96KJ4 702 aa16.57■□□□□ 0.24
HDAC6-206ENST00000426196 PXMP2Q9NR77 195 aa16.57■□□□□ 0.24
HDAC6-206ENST00000426196 MRPL11Q9Y3B7 192 aaKnown RBP16.57■□□□□ 0.24
HDAC6-206ENST00000426196 CCDC171Q6TFL3 1326 aa16.56■□□□□ 0.24
HDAC6-206ENST00000426196 LOC730098B7Z3J9 87 aa16.56■□□□□ 0.24
HDAC6-206ENST00000426196 TREHO43280 583 aa16.56■□□□□ 0.24
HDAC6-206ENST00000426196 SORBS3O60504 671 aa16.56■□□□□ 0.24
HDAC6-206ENST00000426196 GGPS1O95749 300 aa16.56■□□□□ 0.24
HDAC6-206ENST00000426196 GOLGA8HP0CJ92 632 aa16.56■□□□□ 0.24
HDAC6-206ENST00000426196 SMIM10L2AP0DMW4 78 aa16.56■□□□□ 0.24
HDAC6-206ENST00000426196 SMIM10L2BP0DMW5 78 aa16.56■□□□□ 0.24
HDAC6-206ENST00000426196 SMRP1Q8NCR6 262 aa16.56■□□□□ 0.24
HDAC6-206ENST00000426196 CLP1Q92989 425 aaKnown RBP16.56■□□□□ 0.24
HDAC6-206ENST00000426196 C16orf70Q9BSU1 422 aa16.56■□□□□ 0.24
HDAC6-206ENST00000426196 PLVAPQ9BX97 442 aa16.56■□□□□ 0.24
HDAC6-206ENST00000426196 DMDP11532 3685 aa16.56■□□□□ 0.24
HDAC6-206ENST00000426196 H3BRB1 525 aa16.55■□□□□ 0.24
HDAC6-206ENST00000426196 LINC00271P0C7V0 271 aa16.55■□□□□ 0.24
HDAC6-206ENST00000426196 HSPD1P10809 573 aaKnown RBP16.55■□□□□ 0.24
HDAC6-206ENST00000426196 GNAT1P11488 350 aa16.55■□□□□ 0.24
HDAC6-206ENST00000426196 HOXC8P31273 242 aa16.55■□□□□ 0.24
HDAC6-206ENST00000426196 CBX2Q14781 532 aaPredicted RBP16.55■□□□□ 0.24
HDAC6-206ENST00000426196 ALX1Q15699 326 aa16.55■□□□□ 0.24
HDAC6-206ENST00000426196 VPS53Q5VIR6 699 aa16.55■□□□□ 0.24
HDAC6-206ENST00000426196 MIER1Q8N108 512 aa16.55■□□□□ 0.24
HDAC6-206ENST00000426196 OSBPL7Q9BZF2 842 aa16.55■□□□□ 0.24
HDAC6-206ENST00000426196 UBA5Q9GZZ9 404 aa16.55■□□□□ 0.24
HDAC6-206ENST00000426196 CPVLQ9H3G5 476 aa16.55■□□□□ 0.24
HDAC6-206ENST00000426196 TUT1Q9H6E5 874 aaKnown RBP16.55■□□□□ 0.24
HDAC6-206ENST00000426196 KIAA1671Q9BY89 1806 aa16.54■□□□□ 0.24
HDAC6-206ENST00000426196 VCPP55072 806 aaKnown RBP16.54■□□□□ 0.24
HDAC6-206ENST00000426196 RRP1P56182 461 aaKnown RBP16.54■□□□□ 0.24
HDAC6-206ENST00000426196 COASYQ13057 564 aa16.54■□□□□ 0.24
HDAC6-206ENST00000426196 BTG3Q14201 252 aaPredicted RBP16.54■□□□□ 0.24
HDAC6-206ENST00000426196 MLXIPQ9HAP2 919 aa16.54■□□□□ 0.24
HDAC6-206ENST00000426196 ALG13Q9NP73 1137 aaKnown RBP16.54■□□□□ 0.24
HDAC6-206ENST00000426196 DHX16O60231 1041 aaKnown RBP16.53■□□□□ 0.24
HDAC6-206ENST00000426196 CFBP00751 764 aa16.53■□□□□ 0.24
HDAC6-206ENST00000426196 TGFB3P10600 412 aa16.53■□□□□ 0.24
HDAC6-206ENST00000426196 MYCLP12524 364 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-206ENST00000426196 UBA1P22314 1058 aaKnown RBP16.53■□□□□ 0.24
HDAC6-206ENST00000426196 AVPR2P30518 371 aa16.53■□□□□ 0.24
HDAC6-206ENST00000426196 EFHBQ8N7U6 833 aa16.53■□□□□ 0.24
HDAC6-206ENST00000426196 PI4K2BQ8TCG2 481 aa16.53■□□□□ 0.24
HDAC6-206ENST00000426196 PHF7Q9BWX1 381 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-206ENST00000426196 RNPEPQ9H4A4 650 aa16.53■□□□□ 0.24
HDAC6-206ENST00000426196 USP15Q9Y4E8 981 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-206ENST00000426196 WDR87Q6ZQQ6 2873 aa16.53■□□□□ 0.24
HDAC6-206ENST00000426196 GVINP1Q7Z2Y8 2422 aa16.53■□□□□ 0.24
HDAC6-206ENST00000426196 NOP56O00567 594 aaKnown RBP16.52■□□□□ 0.24
HDAC6-206ENST00000426196 LGALS2P05162 132 aa16.52■□□□□ 0.24
HDAC6-206ENST00000426196 PCP11498 1178 aaKnown RBP16.52■□□□□ 0.24
HDAC6-206ENST00000426196 NUBP1P53384 320 aa16.52■□□□□ 0.24
HDAC6-206ENST00000426196 QRICH1Q2TAL8 776 aa16.52■□□□□ 0.24
HDAC6-206ENST00000426196 FAM26DQ5JW98 314 aa16.52■□□□□ 0.24
HDAC6-206ENST00000426196 ADGRF4Q8IZF3 695 aa16.52■□□□□ 0.24
HDAC6-206ENST00000426196 P2RX5Q93086 422 aa16.52■□□□□ 0.24
HDAC6-206ENST00000426196 ASIC4Q96FT7 647 aa16.52■□□□□ 0.24
HDAC6-206ENST00000426196 RPGRIP1Q96KN7 1286 aa16.52■□□□□ 0.24
HDAC6-206ENST00000426196 PDCD2LQ9BRP1 358 aa16.52■□□□□ 0.24
HDAC6-206ENST00000426196 DCTPP1Q9H773 170 aa16.52■□□□□ 0.24
HDAC6-206ENST00000426196 RC3H2Q9HBD1 1191 aaKnown RBP16.52■□□□□ 0.24
HDAC6-206ENST00000426196 CLEC1BQ9P126 229 aa16.52■□□□□ 0.24
HDAC6-206ENST00000426196 PLAGL2Q9UPG8 496 aa16.52■□□□□ 0.24
HDAC6-206ENST00000426196 DOCK5Q9H7D0 1870 aa16.52■□□□□ 0.23
HDAC6-206ENST00000426196 H0Y858 1186 aa16.51■□□□□ 0.23
HDAC6-206ENST00000426196 RGS20O76081 388 aa16.51■□□□□ 0.23
HDAC6-206ENST00000426196 FGAP02671 866 aa16.51■□□□□ 0.23
HDAC6-206ENST00000426196 CAMK1Q14012 370 aa16.51■□□□□ 0.23
HDAC6-206ENST00000426196 NAALADL2Q58DX5 795 aa16.51■□□□□ 0.23
HDAC6-206ENST00000426196 MFSD6Q6ZSS7 791 aa16.51■□□□□ 0.23
HDAC6-206ENST00000426196 ERMP1Q7Z2K6 904 aa16.51■□□□□ 0.23
HDAC6-206ENST00000426196 USP26Q9BXU7 913 aa16.51■□□□□ 0.23
HDAC6-206ENST00000426196 TLR9Q9NR96 1032 aa16.51■□□□□ 0.23
HDAC6-206ENST00000426196 SETD4Q9NVD3 440 aa16.51■□□□□ 0.23
HDAC6-206ENST00000426196 PROB1E7EW31 1015 aa16.5■□□□□ 0.23
HDAC6-206ENST00000426196 KDM4AO75164 1064 aa16.5■□□□□ 0.23
HDAC6-206ENST00000426196 GHRP10912 638 aa16.5■□□□□ 0.23
HDAC6-206ENST00000426196 ICAM3P32942 547 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms