RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 ADCY3O60266 1144 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 SNAI1O95863 264 aaPredicted RBP6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 GNRH1P01148 92 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 EIF2AK2P19525 551 aaKnown RBP6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 PTGS1P23219 599 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 HOXD10P28358 340 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 SSTR3P32745 418 aaPredicted RBP6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 CYP2C19P33261 490 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 GMPRP36959 345 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 CLK2P49760 499 aaKnown RBP6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 ALDH5A1P51649 535 aaPredicted RBP6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 NLRP5P59047 1200 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 HMGN5P82970 282 aaKnown RBP6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 IRF5Q13568 498 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 EARS2Q5JPH6 523 aaKnown RBP6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 PRAMEF19Q5SWL8 479 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 TMEM63BQ5T3F8 832 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 BLIDQ8IZY5 108 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 TRPV1Q8NER1 839 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 RAET1EQ8TD07 263 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 SH3TC2Q8TF17 1288 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 SOCS4Q8WXH5 440 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 BAP1Q92560 729 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 CUL5Q93034 780 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 MAML3Q96JK9 1138 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 PCDHA6Q9UN73 950 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 PCDHA4Q9UN74 947 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 SMC3Q9UQE7 1217 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 PCDHA8Q9Y5H6 950 aa6.55□□□□□ -1.36
HERPUD2-204ENST00000426180 RPTORQ8N122 1335 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 BTBD18B2RXH4 712 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 MYCP01106 439 aaPredicted RBP6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 MMP1P03956 469 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 XRCC5P13010 732 aaKnown RBP6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 MRPL12P52815 198 aaKnown RBP6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 CACNB2Q08289 660 aaPredicted RBP6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 TRAF1Q13077 416 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 NR5A1Q13285 461 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 PGM5Q15124 567 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 PTPRNQ16849 979 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 COL13A1Q5TAT6 717 aaPredicted RBP6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 ARMCX2Q7L311 632 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 FAM184AQ8NB25 1140 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 ZSCAN1Q8NBB4 408 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 DAGLBQ8NCG7 672 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 CCDC148Q8NFR7 591 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 FBXO18Q8NFZ0 1043 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 MORC4Q8TE76 937 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 WASF1Q92558 559 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 TNFRSF25Q93038 417 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 INTS4Q96HW7 963 aaKnown RBP6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 C8orf76Q96K31 380 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 ZFP42Q96MM3 310 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 RMDN3Q96TC7 470 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 PDCD2LQ9BRP1 358 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 TINF2Q9BSI4 451 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 ANO3Q9BYT9 981 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 MCOLN1Q9GZU1 580 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 KATNBL1Q9H079 304 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 UNC93B1Q9H1C4 597 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 C6orf50Q9HD87 102 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 PXMP2Q9NR77 195 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 PDGFCQ9NRA1 345 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 DIS3Q9Y2L1 958 aaKnown RBP6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 RBM19Q9Y4C8 960 aaKnown RBP6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 ZNF236Q9UL36 1845 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 LCTP09848 1927 aa6.54□□□□□ -1.36
HERPUD2-204ENST00000426180 FRMPD4Q14CM0 1322 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 CASP8AP2Q9UKL3 1982 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 ADCY6O43306 1168 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 INHAP05111 366 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 NR3C2P08235 984 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 ZNF865P0CJ78 1059 aaPredicted RBP6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 MYCLP12524 364 aaPredicted RBP6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 SYT1P21579 422 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 EDNRBP24530 442 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 VARSP26640 1264 aaKnown RBP6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 GNA11P29992 359 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 CCND3P30281 292 aaPredicted RBP6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 GRK4P32298 578 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 PRMT2P55345 433 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 MRPS9P82933 396 aaKnown RBP6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 KCNH2Q12809 1159 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 ARHGEF6Q15052 776 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 MTFR1Q15390 333 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 LINC01559Q495D7 138 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 ARHGEF16Q5VV41 709 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 LARP1BQ659C4 914 aaKnown RBP6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 OLFML2BQ68BL8 750 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 FBXO46Q6PJ61 603 aaPredicted RBP6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 MAMDC4Q6UXC1 1216 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 EEPD1Q7L9B9 569 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 VSIG10LQ86VR7 867 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 FBXO16Q8IX29 292 aaPredicted RBP6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 DIS3L2Q8IYB7 885 aaKnown RBP6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 REXO1Q8N1G1 1221 aaKnown RBP6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 SAMD3Q8N6K7 520 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 DNERQ8NFT8 737 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 CYP2W1Q8TAV3 490 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms