RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 NEK4P51957 841 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 FPGSQ05932 587 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 SSRP1Q08945 709 aaKnown RBP15.58■□□□□ 0.08
SNX3-204ENST00000426155 AP3B2Q13367 1082 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 MTMR1Q13613 665 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 MFSD10Q14728 455 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 SHHQ15465 462 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 NFRKBQ6P4R8 1299 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 METTL7BQ6UX53 244 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 TRIM50Q86XT4 487 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 NECAB1Q8N987 351 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 GPRASP2Q96D09 838 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 NOC4LQ9BVI4 516 aaKnown RBP15.58■□□□□ 0.08
SNX3-204ENST00000426155 WNT8AQ9H1J5 351 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 HIPK3Q9H422 1215 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 EHMT1Q9H9B1 1298 aa15.58■□□□□ 0.08
SNX3-204ENST00000426155 GBF1Q92538 1859 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 PFKFB2O60825 505 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 CTDNEP1O95476 244 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 FOSP01100 380 aaPredicted RBP15.57■□□□□ 0.08
SNX3-204ENST00000426155 LGALS2P05162 132 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 CSF2RAP15509 400 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 SREBF1P36956 1147 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 CCL23P55773 120 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 NEDD9Q14511 834 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 HIC1Q14526 733 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 ME3Q16798 604 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 KIAA0753Q2KHM9 967 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 GDF6Q6KF10 455 aaPredicted RBP15.57■□□□□ 0.08
SNX3-204ENST00000426155 MFSD5Q6N075 450 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 TRIM22Q8IYM9 498 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 REXO1Q8N1G1 1221 aaKnown RBP15.57■□□□□ 0.08
SNX3-204ENST00000426155 UIMC1Q96RL1 719 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 CTAGE1Q96RT6 745 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 GPR20Q99678 358 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 C16orf70Q9BSU1 422 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 SLKQ9H2G2 1235 aaPredicted RBP15.57■□□□□ 0.08
SNX3-204ENST00000426155 C6orf50Q9HD87 102 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 JADE2Q9NQC1 790 aa15.57■□□□□ 0.08
SNX3-204ENST00000426155 HAS3O00219 553 aa15.56■□□□□ 0.08
SNX3-204ENST00000426155 NOP56O00567 594 aaKnown RBP15.56■□□□□ 0.08
SNX3-204ENST00000426155 ARP10275 920 aa15.56■□□□□ 0.08
SNX3-204ENST00000426155 ACRP10323 421 aa15.56■□□□□ 0.08
SNX3-204ENST00000426155 ARHGAP4P98171 946 aa15.56■□□□□ 0.08
SNX3-204ENST00000426155 CCDC148Q8NFR7 591 aa15.56■□□□□ 0.08
SNX3-204ENST00000426155 CCDC12Q8WUD4 166 aaPredicted RBP15.56■□□□□ 0.08
SNX3-204ENST00000426155 SCLYQ96I15 445 aa15.56■□□□□ 0.08
SNX3-204ENST00000426155 MXRA8Q9BRK3 442 aa15.56■□□□□ 0.08
SNX3-204ENST00000426155 SEZ6LQ9BYH1 1024 aa15.56■□□□□ 0.08
SNX3-204ENST00000426155 GLT8D2Q9H1C3 349 aa15.56■□□□□ 0.08
SNX3-204ENST00000426155 GJB4Q9NTQ9 266 aa15.56■□□□□ 0.08
SNX3-204ENST00000426155 HDAC6Q9UBN7 1215 aa15.56■□□□□ 0.08
SNX3-204ENST00000426155 WDR81Q562E7 1941 aa15.56■□□□□ 0.08
SNX3-204ENST00000426155 FAM86B1E9PN63 330 aa15.55■□□□□ 0.08
SNX3-204ENST00000426155 DEXIO95424 95 aa15.55■□□□□ 0.08
SNX3-204ENST00000426155 FAM86B2P0C5J1 330 aa15.55■□□□□ 0.08
SNX3-204ENST00000426155 NLRP5P59047 1200 aa15.55■□□□□ 0.08
SNX3-204ENST00000426155 ZNF200P98182 395 aaPredicted RBP15.55■□□□□ 0.08
SNX3-204ENST00000426155 ST3GAL1Q11201 340 aa15.55■□□□□ 0.08
SNX3-204ENST00000426155 ITGB3BPQ13352 177 aaPredicted RBP15.55■□□□□ 0.08
SNX3-204ENST00000426155 ANKRD1Q15327 319 aa15.55■□□□□ 0.08
SNX3-204ENST00000426155 CEP55Q53EZ4 464 aa15.55■□□□□ 0.08
SNX3-204ENST00000426155 UTP14CQ5TAP6 766 aaKnown RBP15.55■□□□□ 0.08
SNX3-204ENST00000426155 C16orf59Q7L2K0 433 aa15.55■□□□□ 0.08
SNX3-204ENST00000426155 C7orf31Q8N865 590 aa15.55■□□□□ 0.08
SNX3-204ENST00000426155 CRYGNQ8WXF5 182 aa15.55■□□□□ 0.08
SNX3-204ENST00000426155 KIF2CQ99661 725 aa15.55■□□□□ 0.08
SNX3-204ENST00000426155 SENP7Q9BQF6 1050 aa15.55■□□□□ 0.08
SNX3-204ENST00000426155 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.55■□□□□ 0.08
SNX3-204ENST00000426155 KATNAL1Q9BW62 490 aa15.55■□□□□ 0.08
SNX3-204ENST00000426155 KCNH7Q9NS40 1196 aa15.55■□□□□ 0.08
SNX3-204ENST00000426155 GTF2IRD1Q9UHL9 959 aa15.55■□□□□ 0.08
SNX3-204ENST00000426155 KAT6AQ92794 2004 aa15.55■□□□□ 0.08
SNX3-204ENST00000426155 STK36Q9NRP7 1315 aa15.54■□□□□ 0.08
SNX3-204ENST00000426155 EIF5BO60841 1220 aaKnown RBP15.54■□□□□ 0.08
SNX3-204ENST00000426155 PPFIA4O75335 1185 aa15.54■□□□□ 0.08
SNX3-204ENST00000426155 GNA11P29992 359 aa15.54■□□□□ 0.08
SNX3-204ENST00000426155 PTPN11Q06124 597 aaPredicted RBP15.54■□□□□ 0.08
SNX3-204ENST00000426155 NPY5RQ15761 445 aa15.54■□□□□ 0.08
SNX3-204ENST00000426155 PTGISQ16647 500 aa15.54■□□□□ 0.08
SNX3-204ENST00000426155 LRIT3Q3SXY7 679 aa15.54■□□□□ 0.08
SNX3-204ENST00000426155 CPLX2Q6PUV4 134 aaKnown RBP15.54■□□□□ 0.08
SNX3-204ENST00000426155 SESTD1Q86VW0 696 aa15.54■□□□□ 0.08
SNX3-204ENST00000426155 TMEM199Q8N511 208 aa15.54■□□□□ 0.08
SNX3-204ENST00000426155 TET1Q8NFU7 2136 aa15.54■□□□□ 0.08
SNX3-204ENST00000426155 DHX38Q92620 1227 aaKnown RBP15.54■□□□□ 0.08
SNX3-204ENST00000426155 WNT8BQ93098 351 aa15.54■□□□□ 0.08
SNX3-204ENST00000426155 GTF3C6Q969F1 213 aa15.54■□□□□ 0.08
SNX3-204ENST00000426155 CDHR1Q96JP9 859 aa15.54■□□□□ 0.08
SNX3-204ENST00000426155 KCNJ14Q9UNX9 436 aa15.54■□□□□ 0.08
SNX3-204ENST00000426155 NOD1Q9Y239 953 aa15.54■□□□□ 0.08
SNX3-204ENST00000426155 SIP14410 1827 aa15.54■□□□□ 0.08
SNX3-204ENST00000426155 PTPRSQ13332 1948 aa15.53■□□□□ 0.08
SNX3-204ENST00000426155 IGLV3-22A0A075B6J6 115 aa15.53■□□□□ 0.08
SNX3-204ENST00000426155 GSTTP1A0A1W2PQM5 241 aa15.53■□□□□ 0.08
SNX3-204ENST00000426155 H3BRB1 525 aa15.53■□□□□ 0.08
SNX3-204ENST00000426155 EDIL3O43854 480 aa15.53■□□□□ 0.08
SNX3-204ENST00000426155 SUPT20HL2P0C7V6 817 aa15.53■□□□□ 0.08
SNX3-204ENST00000426155 TCF7P36402 384 aaPredicted RBP15.53■□□□□ 0.08
SNX3-204ENST00000426155 ZNF76P36508 570 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms