RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 RETREG2Q8NC44 543 aa20■□□□□ 0.79
SLC6A1-202ENST00000425938 ZNF274Q96GC6 653 aaPredicted RBP20■□□□□ 0.79
SLC6A1-202ENST00000425938 FAM161BQ96MY7 647 aa20■□□□□ 0.79
SLC6A1-202ENST00000425938 ANO3Q9BYT9 981 aa20■□□□□ 0.79
SLC6A1-202ENST00000425938 NCOA5Q9HCD5 579 aaKnown RBP20■□□□□ 0.79
SLC6A1-202ENST00000425938 C6orf50Q9HD87 102 aa20■□□□□ 0.79
SLC6A1-202ENST00000425938 UBIAD1Q9Y5Z9 338 aa20■□□□□ 0.79
SLC6A1-202ENST00000425938 ESYT2A0FGR8 921 aa19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 HAS3O00219 553 aa19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 CPLX1O14810 134 aa19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 MAFGO15525 162 aa19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 ACRP10323 421 aa19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 NTRK3Q16288 839 aa19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 GDF6Q6KF10 455 aaPredicted RBP19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 CPLX2Q6PUV4 134 aaKnown RBP19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 ZNF365Q70YC5 407 aa19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 RPUSD2Q8IZ73 545 aaKnown RBP19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 GUCD1Q96NT3 240 aa19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 WNT8AQ9H1J5 351 aa19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 MTIF3Q9H2K0 278 aaKnown RBP19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 SEMA6BQ9H3T3 888 aa19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 BCAS3Q9H6U6 928 aa19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 JADE2Q9NQC1 790 aa19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 HDAC6Q9UBN7 1215 aa19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 GTF2IRD1Q9UHL9 959 aa19.99■□□□□ 0.79
SLC6A1-202ENST00000425938 PITPNM1O00562 1244 aa19.98■□□□□ 0.79
SLC6A1-202ENST00000425938 LGALS2P05162 132 aa19.98■□□□□ 0.79
SLC6A1-202ENST00000425938 GNA11P29992 359 aa19.98■□□□□ 0.79
SLC6A1-202ENST00000425938 SP4Q02446 784 aa19.98■□□□□ 0.79
SLC6A1-202ENST00000425938 PKN1Q16512 942 aa19.98■□□□□ 0.79
SLC6A1-202ENST00000425938 RASIP1Q5U651 963 aa19.98■□□□□ 0.79
SLC6A1-202ENST00000425938 MCTP2Q6DN12 878 aa19.98■□□□□ 0.79
SLC6A1-202ENST00000425938 CCDC148Q8NFR7 591 aa19.98■□□□□ 0.79
SLC6A1-202ENST00000425938 PGBD1Q96JS3 809 aa19.98■□□□□ 0.79
SLC6A1-202ENST00000425938 GPR20Q99678 358 aa19.98■□□□□ 0.79
SLC6A1-202ENST00000425938 C16orf70Q9BSU1 422 aa19.98■□□□□ 0.79
SLC6A1-202ENST00000425938 ZMYND12Q9H0C1 365 aa19.98■□□□□ 0.79
SLC6A1-202ENST00000425938 TANC1Q9C0D5 1861 aa19.98■□□□□ 0.79
SLC6A1-202ENST00000425938 SCN5AQ14524 2016 aa19.98■□□□□ 0.79
SLC6A1-202ENST00000425938 TMEM265A0A087WTH1 108 aa19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 H3BRB1 525 aa19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 FGBP02675 491 aa19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 KCNA2P16389 499 aa19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 SREBF1P36956 1147 aa19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 CLK2P49760 499 aaKnown RBP19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 SSRP1Q08945 709 aaKnown RBP19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 JAKMIP3Q5VZ66 844 aa19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 REXO1Q8N1G1 1221 aaKnown RBP19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 CAGE1Q8TC20 777 aa19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 BICD2Q8TD16 824 aa19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 SCLYQ96I15 445 aa19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 MXRA8Q9BRK3 442 aa19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 LARP6Q9BRS8 491 aaKnown RBP19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 TUT1Q9H6E5 874 aaKnown RBP19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 TMEM260Q9NX78 707 aa19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 ZNF215Q9UL58 517 aaPredicted RBP19.97■□□□□ 0.79
SLC6A1-202ENST00000425938 ATP9AO75110 1047 aa19.96■□□□□ 0.79
SLC6A1-202ENST00000425938 PPFIA3O75145 1194 aa19.96■□□□□ 0.79
SLC6A1-202ENST00000425938 PFKMP08237 780 aa19.96■□□□□ 0.79
SLC6A1-202ENST00000425938 RFC2P35250 354 aa19.96■□□□□ 0.79
SLC6A1-202ENST00000425938 ZNF76P36508 570 aa19.96■□□□□ 0.79
SLC6A1-202ENST00000425938 STK3Q13188 491 aa19.96■□□□□ 0.79
SLC6A1-202ENST00000425938 CEP55Q53EZ4 464 aa19.96■□□□□ 0.79
SLC6A1-202ENST00000425938 SLC17A8Q8NDX2 589 aa19.96■□□□□ 0.79
SLC6A1-202ENST00000425938 HERVK_113Q902F9 699 aa19.96■□□□□ 0.79
SLC6A1-202ENST00000425938 PKD2L1Q9P0L9 805 aa19.96■□□□□ 0.79
SLC6A1-202ENST00000425938 ARHGAP4P98171 946 aa19.95■□□□□ 0.78
SLC6A1-202ENST00000425938 ANKRD1Q15327 319 aa19.95■□□□□ 0.78
SLC6A1-202ENST00000425938 UTP14CQ5TAP6 766 aaKnown RBP19.95■□□□□ 0.78
SLC6A1-202ENST00000425938 AFAP1L1Q8TED9 768 aa19.95■□□□□ 0.78
SLC6A1-202ENST00000425938 TTYH1Q9H313 450 aaPredicted RBP19.95■□□□□ 0.78
SLC6A1-202ENST00000425938 KCNH7Q9NS40 1196 aa19.95■□□□□ 0.78
SLC6A1-202ENST00000425938 MYO9BQ13459 2157 aa19.94■□□□□ 0.78
SLC6A1-202ENST00000425938 CDKL5O76039 1030 aa19.94■□□□□ 0.78
SLC6A1-202ENST00000425938 IQCF3P0C7M6 154 aa19.94■□□□□ 0.78
SLC6A1-202ENST00000425938 DNAJB2P25686 324 aa19.94■□□□□ 0.78
SLC6A1-202ENST00000425938 PTK7Q13308 1070 aa19.94■□□□□ 0.78
SLC6A1-202ENST00000425938 SEPT1Q8WYJ6 367 aa19.94■□□□□ 0.78
SLC6A1-202ENST00000425938 CTAGE1Q96RT6 745 aa19.94■□□□□ 0.78
SLC6A1-202ENST00000425938 CDX2Q99626 313 aaPredicted RBP19.94■□□□□ 0.78
SLC6A1-202ENST00000425938 SDF4Q9BRK5 362 aa19.94■□□□□ 0.78
SLC6A1-202ENST00000425938 SLKQ9H2G2 1235 aaPredicted RBP19.94■□□□□ 0.78
SLC6A1-202ENST00000425938 JPH1Q9HDC5 661 aaPredicted RBP19.94■□□□□ 0.78
SLC6A1-202ENST00000425938 SH3GLB2Q9NR46 395 aa19.94■□□□□ 0.78
SLC6A1-202ENST00000425938 VPS54Q9P1Q0 977 aa19.94■□□□□ 0.78
SLC6A1-202ENST00000425938 TET1Q8NFU7 2136 aa19.93■□□□□ 0.78
SLC6A1-202ENST00000425938 C17orf102A2RUQ5 167 aa19.93■□□□□ 0.78
SLC6A1-202ENST00000425938 DEXIO95424 95 aa19.93■□□□□ 0.78
SLC6A1-202ENST00000425938 TCF7P36402 384 aaPredicted RBP19.93■□□□□ 0.78
SLC6A1-202ENST00000425938 NLRP5P59047 1200 aa19.93■□□□□ 0.78
SLC6A1-202ENST00000425938 OTOP2Q7RTS6 562 aa19.93■□□□□ 0.78
SLC6A1-202ENST00000425938 DEFB128Q7Z7B8 93 aa19.93■□□□□ 0.78
SLC6A1-202ENST00000425938 TRIM50Q86XT4 487 aa19.93■□□□□ 0.78
SLC6A1-202ENST00000425938 CYP2W1Q8TAV3 490 aa19.93■□□□□ 0.78
SLC6A1-202ENST00000425938 MEIS1O00470 390 aa19.92■□□□□ 0.78
SLC6A1-202ENST00000425938 PARNO95453 639 aaKnown RBP19.92■□□□□ 0.78
SLC6A1-202ENST00000425938 SMIM10L2AP0DMW4 78 aa19.92■□□□□ 0.78
SLC6A1-202ENST00000425938 SMIM10L2BP0DMW5 78 aa19.92■□□□□ 0.78
SLC6A1-202ENST00000425938 GNAT1P11488 350 aa19.92■□□□□ 0.78
SLC6A1-202ENST00000425938 ACTN1P12814 892 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms