RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 RNF214Q8ND24 703 aa17.66■□□□□ 0.42
SHOX2-202ENST00000425436 CYP2W1Q8TAV3 490 aa17.66■□□□□ 0.42
SHOX2-202ENST00000425436 TBCKQ8TEA7 893 aa17.66■□□□□ 0.42
SHOX2-202ENST00000425436 DEFB118Q96PH6 123 aa17.66■□□□□ 0.42
SHOX2-202ENST00000425436 NRBP1Q9UHY1 535 aa17.66■□□□□ 0.42
SHOX2-202ENST00000425436 FAM184BQ9ULE4 1060 aa17.66■□□□□ 0.42
SHOX2-202ENST00000425436 CCDC194A0A1B0GVG4 234 aa17.65■□□□□ 0.42
SHOX2-202ENST00000425436 EDIL3O43854 480 aa17.65■□□□□ 0.42
SHOX2-202ENST00000425436 TNFAIP2Q03169 654 aa17.65■□□□□ 0.42
SHOX2-202ENST00000425436 INF2Q27J81 1249 aa17.65■□□□□ 0.42
SHOX2-202ENST00000425436 GJC2Q5T442 439 aaPredicted RBP17.65■□□□□ 0.42
SHOX2-202ENST00000425436 KRT25Q7Z3Z0 450 aa17.65■□□□□ 0.42
SHOX2-202ENST00000425436 ZNF579Q8NAF0 562 aaKnown RBP17.65■□□□□ 0.42
SHOX2-202ENST00000425436 FAM200AQ8TCP9 573 aa17.65■□□□□ 0.42
SHOX2-202ENST00000425436 TNFRSF25Q93038 417 aa17.65■□□□□ 0.42
SHOX2-202ENST00000425436 PDLIM2Q96JY6 352 aa17.65■□□□□ 0.42
SHOX2-202ENST00000425436 SDF4Q9BRK5 362 aa17.65■□□□□ 0.42
SHOX2-202ENST00000425436 WDR11Q9BZH6 1224 aa17.65■□□□□ 0.42
SHOX2-202ENST00000425436 GOLPH3LQ9H4A5 285 aa17.65■□□□□ 0.42
SHOX2-202ENST00000425436 PAK6Q9NQU5 681 aaPredicted RBP17.65■□□□□ 0.42
SHOX2-202ENST00000425436 DDX20Q9UHI6 824 aaKnown RBP17.65■□□□□ 0.42
SHOX2-202ENST00000425436 CCDC85CA6NKD9 419 aa17.64■□□□□ 0.41
SHOX2-202ENST00000425436 ARIH2O95376 493 aa17.64■□□□□ 0.41
SHOX2-202ENST00000425436 AKR1A1P14550 325 aa17.64■□□□□ 0.41
SHOX2-202ENST00000425436 SMPD1P17405 629 aa17.64■□□□□ 0.41
SHOX2-202ENST00000425436 ITGB5P18084 799 aa17.64■□□□□ 0.41
SHOX2-202ENST00000425436 ZNF76P36508 570 aa17.64■□□□□ 0.41
SHOX2-202ENST00000425436 NONOQ15233 471 aaKnown RBP eCLIP17.64■□□□□ 0.41
SHOX2-202ENST00000425436 LHX8Q68G74 356 aa17.64■□□□□ 0.41
SHOX2-202ENST00000425436 IQSEC1Q6DN90 963 aa17.64■□□□□ 0.41
SHOX2-202ENST00000425436 XRRA1Q6P2D8 792 aa17.64■□□□□ 0.41
SHOX2-202ENST00000425436 ELOA2Q8IYF1 753 aaPredicted RBP17.64■□□□□ 0.41
SHOX2-202ENST00000425436 CRYGNQ8WXF5 182 aa17.64■□□□□ 0.41
SHOX2-202ENST00000425436 SORBS3O60504 671 aa17.63■□□□□ 0.41
SHOX2-202ENST00000425436 TXNP10599 105 aaKnown RBP17.63■□□□□ 0.41
SHOX2-202ENST00000425436 LY6KQ17RY6 165 aa17.63■□□□□ 0.41
SHOX2-202ENST00000425436 CKAP2LQ8IYA6 745 aa17.63■□□□□ 0.41
SHOX2-202ENST00000425436 COPS5Q92905 334 aa17.63■□□□□ 0.41
SHOX2-202ENST00000425436 UIMC1Q96RL1 719 aa17.63■□□□□ 0.41
SHOX2-202ENST00000425436 TMEM106CQ9BVX2 250 aa17.63■□□□□ 0.41
SHOX2-202ENST00000425436 UBIAD1Q9Y5Z9 338 aa17.63■□□□□ 0.41
SHOX2-202ENST00000425436 RBM47A0AV96 593 aaKnown RBP17.62■□□□□ 0.41
SHOX2-202ENST00000425436 FAM86B1E9PN63 330 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 ZNF202O95125 648 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 MYCNP04198 464 aaPredicted RBP17.62■□□□□ 0.41
SHOX2-202ENST00000425436 CYP3A4P08684 503 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 FAM86B2P0C5J1 330 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 TOB1P50616 345 aaPredicted RBP17.62■□□□□ 0.41
SHOX2-202ENST00000425436 NDUFA8P51970 172 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 IRX5P78411 483 aaPredicted RBP17.62■□□□□ 0.41
SHOX2-202ENST00000425436 SP2Q02086 613 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 SCFD2Q8WU76 684 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 INPP4AQ96PE3 977 aaPredicted RBP17.62■□□□□ 0.41
SHOX2-202ENST00000425436 MXRA8Q9BRK3 442 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 BCAS3Q9H6U6 928 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 FAM13BQ9NYF5 915 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 HOOK1Q9UJC3 728 aaKnown RBP17.62■□□□□ 0.41
SHOX2-202ENST00000425436 MRVI1Q9Y6F6 885 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 KIAA0100Q14667 2235 aaKnown RBP17.62■□□□□ 0.41
SHOX2-202ENST00000425436 MYH15Q9Y2K3 1946 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 A0A1B0GVL5 298 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 POTEFA5A3E0 1075 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 STAM2O75886 525 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 GJB1P08034 283 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 RARBP10826 455 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 MARCKSP29966 332 aaPredicted RBP17.62■□□□□ 0.41
SHOX2-202ENST00000425436 SEMA3FQ13275 785 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 TTLL4Q14679 1199 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 ZRSR1Q15695 479 aaKnown RBP17.62■□□□□ 0.41
SHOX2-202ENST00000425436 CEP55Q53EZ4 464 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 RESP18Q5W5W9 173 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 CCDC62Q6P9F0 684 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 U2AF1L4Q8WU68 220 aaKnown RBP17.62■□□□□ 0.41
SHOX2-202ENST00000425436 JADE2Q9NQC1 790 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 ANO10Q9NW15 660 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 PKD2L1Q9P0L9 805 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 DDX41Q9UJV9 622 aaKnown RBP17.62■□□□□ 0.41
SHOX2-202ENST00000425436 HPSEQ9Y251 543 aa17.62■□□□□ 0.41
SHOX2-202ENST00000425436 SRPRBQ9Y5M8 271 aaKnown RBP17.62■□□□□ 0.41
SHOX2-202ENST00000425436 SPATA31C2B4DYI2 1134 aa17.61■□□□□ 0.41
SHOX2-202ENST00000425436 DYNC1LI2O43237 492 aaPredicted RBP17.61■□□□□ 0.41
SHOX2-202ENST00000425436 SGPL1O95470 568 aa17.61■□□□□ 0.41
SHOX2-202ENST00000425436 PGK1P00558 417 aa17.61■□□□□ 0.41
SHOX2-202ENST00000425436 TFRCP02786 760 aaKnown RBP17.61■□□□□ 0.41
SHOX2-202ENST00000425436 ARP10275 920 aa17.61■□□□□ 0.41
SHOX2-202ENST00000425436 ATP2B1P20020 1258 aa17.61■□□□□ 0.41
SHOX2-202ENST00000425436 SYKP43405 635 aa17.61■□□□□ 0.41
SHOX2-202ENST00000425436 USP11P51784 963 aa17.61■□□□□ 0.41
SHOX2-202ENST00000425436 MTMR1Q13613 665 aa17.61■□□□□ 0.41
SHOX2-202ENST00000425436 STX1AQ16623 288 aa17.61■□□□□ 0.41
SHOX2-202ENST00000425436 LETM2Q2VYF4 491 aa17.61■□□□□ 0.41
SHOX2-202ENST00000425436 GNPTABQ3T906 1256 aa17.61■□□□□ 0.41
SHOX2-202ENST00000425436 DUSP28Q4G0W2 176 aa17.61■□□□□ 0.41
SHOX2-202ENST00000425436 NLRX1Q86UT6 975 aa17.61■□□□□ 0.41
SHOX2-202ENST00000425436 FERMT2Q96AC1 680 aa17.61■□□□□ 0.41
SHOX2-202ENST00000425436 CCDC34Q96HJ3 373 aa17.61■□□□□ 0.41
SHOX2-202ENST00000425436 NAT10Q9H0A0 1025 aaKnown RBP17.61■□□□□ 0.41
SHOX2-202ENST00000425436 GNEQ9Y223 722 aaKnown RBP17.61■□□□□ 0.41
SHOX2-202ENST00000425436 DOCK5Q9H7D0 1870 aa17.61■□□□□ 0.41
SHOX2-202ENST00000425436 MEIS1O00470 390 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms