RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 TRIM48Q8IWZ4 208 aa7.97□□□□□ -1.13
LINC01040-201ENST00000425048 ZCCHC14Q8WYQ9 949 aaKnown RBP7.97□□□□□ -1.13
LINC01040-201ENST00000425048 CD248Q9HCU0 757 aa7.97□□□□□ -1.13
LINC01040-201ENST00000425048 NPFFR2Q9Y5X5 522 aa7.97□□□□□ -1.13
LINC01040-201ENST00000425048 B2RBV5 119 aa7.96□□□□□ -1.14
LINC01040-201ENST00000425048 KRIT1O00522 736 aa7.96□□□□□ -1.14
LINC01040-201ENST00000425048 TACR2P21452 398 aa7.96□□□□□ -1.14
LINC01040-201ENST00000425048 CYP4F22Q6NT55 531 aa7.96□□□□□ -1.14
LINC01040-201ENST00000425048 TMC5Q6UXY8 1006 aa7.96□□□□□ -1.14
LINC01040-201ENST00000425048 DNERQ8NFT8 737 aa7.96□□□□□ -1.14
LINC01040-201ENST00000425048 CAPN10Q9HC96 672 aa7.96□□□□□ -1.14
LINC01040-201ENST00000425048 WASF3Q9UPY6 502 aa7.96□□□□□ -1.14
LINC01040-201ENST00000425048 SLC35F1Q5T1Q4 408 aa7.95□□□□□ -1.14
LINC01040-201ENST00000425048 SLFN13Q68D06 897 aa7.95□□□□□ -1.14
LINC01040-201ENST00000425048 C1orf159Q96HA4 380 aa7.95□□□□□ -1.14
LINC01040-201ENST00000425048 KIAA1522Q9P206 1035 aaPredicted RBP7.95□□□□□ -1.14
LINC01040-201ENST00000425048 ASH2LQ9UBL3 628 aa7.95□□□□□ -1.14
LINC01040-201ENST00000425048 PRKAG3Q9UGI9 489 aa7.95□□□□□ -1.14
LINC01040-201ENST00000425048 AGRPO00253 132 aa7.94□□□□□ -1.14
LINC01040-201ENST00000425048 SUV39H1O43463 412 aa7.94□□□□□ -1.14
LINC01040-201ENST00000425048 CAPNS1P04632 268 aa7.94□□□□□ -1.14
LINC01040-201ENST00000425048 KCTD13Q8WZ19 329 aa7.94□□□□□ -1.14
LINC01040-201ENST00000425048 EPN3Q9H201 632 aa7.94□□□□□ -1.14
LINC01040-201ENST00000425048 CDIP1Q9H305 208 aa7.94□□□□□ -1.14
LINC01040-201ENST00000425048 SLC6A20Q9NP91 592 aa7.94□□□□□ -1.14
LINC01040-201ENST00000425048 HMGA2P52926 109 aa7.93□□□□□ -1.14
LINC01040-201ENST00000425048 MRM1Q6IN84 353 aaKnown RBP7.93□□□□□ -1.14
LINC01040-201ENST00000425048 ZNF585AQ6P3V2 769 aa7.93□□□□□ -1.14
LINC01040-201ENST00000425048 CRIP3Q6Q6R5 217 aa7.93□□□□□ -1.14
LINC01040-201ENST00000425048 EEPD1Q7L9B9 569 aa7.93□□□□□ -1.14
LINC01040-201ENST00000425048 MICAL1Q8TDZ2 1067 aa7.93□□□□□ -1.14
LINC01040-201ENST00000425048 JAM3Q9BX67 310 aa7.93□□□□□ -1.14
LINC01040-201ENST00000425048 SCAND2PQ9GZW5 306 aaPredicted RBP7.93□□□□□ -1.14
LINC01040-201ENST00000425048 SEMA4AQ9H3S1 761 aa7.93□□□□□ -1.14
LINC01040-201ENST00000425048 GPR27Q9NS67 375 aa7.93□□□□□ -1.14
LINC01040-201ENST00000425048 ADAM29Q9UKF5 820 aa7.93□□□□□ -1.14
LINC01040-201ENST00000425048 TCAF1Q9Y4C2 921 aa7.93□□□□□ -1.14
LINC01040-201ENST00000425048 CYR61O00622 381 aa7.92□□□□□ -1.14
LINC01040-201ENST00000425048 ETFBP38117 255 aa7.92□□□□□ -1.14
LINC01040-201ENST00000425048 MAP4K2Q12851 820 aa7.92□□□□□ -1.14
LINC01040-201ENST00000425048 Q8N1X5 172 aa7.92□□□□□ -1.14
LINC01040-201ENST00000425048 TTLL11Q8NHH1 800 aa7.92□□□□□ -1.14
LINC01040-201ENST00000425048 PTPN18Q99952 460 aa7.92□□□□□ -1.14
LINC01040-201ENST00000425048 PATE3B3GLJ2 98 aa7.91□□□□□ -1.14
LINC01040-201ENST00000425048 SLC27A2O14975 620 aa7.91□□□□□ -1.14
LINC01040-201ENST00000425048 FZD7O75084 574 aa7.91□□□□□ -1.14
LINC01040-201ENST00000425048 ZNF623O75123 536 aa7.91□□□□□ -1.14
LINC01040-201ENST00000425048 AMHP03971 560 aa7.91□□□□□ -1.14
LINC01040-201ENST00000425048 ACVRL1P37023 503 aa7.91□□□□□ -1.14
LINC01040-201ENST00000425048 GRIA2P42262 883 aa7.91□□□□□ -1.14
LINC01040-201ENST00000425048 PPP2R2AP63151 447 aa7.91□□□□□ -1.14
LINC01040-201ENST00000425048 VASNQ6EMK4 673 aa7.91□□□□□ -1.14
LINC01040-201ENST00000425048 USP51Q70EK9 711 aa7.91□□□□□ -1.14
LINC01040-201ENST00000425048 PIP4K2CQ8TBX8 421 aa7.91□□□□□ -1.14
LINC01040-201ENST00000425048 CLEC4DQ8WXI8 215 aa7.91□□□□□ -1.14
LINC01040-201ENST00000425048 VPS11Q9H270 941 aa7.91□□□□□ -1.14
LINC01040-201ENST00000425048 DLL4Q9NR61 685 aa7.91□□□□□ -1.14
LINC01040-201ENST00000425048 RBPJLQ9UBG7 517 aa7.91□□□□□ -1.14
LINC01040-201ENST00000425048 CHGBP05060 677 aa7.9□□□□□ -1.14
LINC01040-201ENST00000425048 COL6A1P12109 1028 aa7.9□□□□□ -1.14
LINC01040-201ENST00000425048 SELENOPP49908 381 aa7.9□□□□□ -1.14
LINC01040-201ENST00000425048 RSPO2Q6UXX9 243 aaPredicted RBP7.9□□□□□ -1.14
LINC01040-201ENST00000425048 PROSER1Q86XN7 944 aa7.9□□□□□ -1.14
LINC01040-201ENST00000425048 PALM2Q8IXS6 379 aa7.9□□□□□ -1.14
LINC01040-201ENST00000425048 DTX3Q8N9I9 347 aa7.9□□□□□ -1.14
LINC01040-201ENST00000425048 NUDT10Q8NFP7 164 aa7.9□□□□□ -1.14
LINC01040-201ENST00000425048 NUDT11Q96G61 164 aa7.9□□□□□ -1.14
LINC01040-201ENST00000425048 ZNF747Q9BV97 191 aa7.9□□□□□ -1.14
LINC01040-201ENST00000425048 NUB1Q9Y5A7 615 aa7.9□□□□□ -1.14
LINC01040-201ENST00000425048 KLHL18O94889 574 aa7.89□□□□□ -1.15
LINC01040-201ENST00000425048 FBXO21O94952 628 aa7.89□□□□□ -1.15
LINC01040-201ENST00000425048 GJB6O95452 261 aa7.89□□□□□ -1.15
LINC01040-201ENST00000425048 GRIN1Q05586 938 aa7.89□□□□□ -1.15
LINC01040-201ENST00000425048 SMAD2Q15796 467 aaKnown RBP7.89□□□□□ -1.15
LINC01040-201ENST00000425048 WWC2-AS2Q96NR7 200 aa7.89□□□□□ -1.15
LINC01040-201ENST00000425048 MRIQ9BWK5 157 aa7.89□□□□□ -1.15
LINC01040-201ENST00000425048 TESMINQ9Y4I5 508 aa7.89□□□□□ -1.15
LINC01040-201ENST00000425048 A0A1W2PQU0 124 aa7.88□□□□□ -1.15
LINC01040-201ENST00000425048 UNCXA6NJT0 531 aa7.88□□□□□ -1.15
LINC01040-201ENST00000425048 MUSKO15146 869 aa7.88□□□□□ -1.15
LINC01040-201ENST00000425048 CKMP06732 381 aa7.88□□□□□ -1.15
LINC01040-201ENST00000425048 GNL2Q13823 731 aaKnown RBP7.88□□□□□ -1.15
LINC01040-201ENST00000425048 SLC10A6Q3KNW5 377 aa7.88□□□□□ -1.15
LINC01040-201ENST00000425048 Q6ZUG5 572 aa7.88□□□□□ -1.15
LINC01040-201ENST00000425048 OTOP3Q7RTS5 596 aa7.88□□□□□ -1.15
LINC01040-201ENST00000425048 IER2Q9BTL4 223 aa7.88□□□□□ -1.15
LINC01040-201ENST00000425048 SEC61A2Q9H9S3 476 aa7.88□□□□□ -1.15
LINC01040-201ENST00000425048 DLX3O60479 287 aa7.87□□□□□ -1.15
LINC01040-201ENST00000425048 MSCO60682 206 aa7.87□□□□□ -1.15
LINC01040-201ENST00000425048 ENO2P09104 434 aaPredicted RBP7.87□□□□□ -1.15
LINC01040-201ENST00000425048 FAHP16930 419 aa7.87□□□□□ -1.15
LINC01040-201ENST00000425048 PHF19Q5T6S3 580 aa7.87□□□□□ -1.15
LINC01040-201ENST00000425048 KRTAP5-3Q6L8H2 238 aa7.87□□□□□ -1.15
LINC01040-201ENST00000425048 USP53Q70EK8 1073 aa7.87□□□□□ -1.15
LINC01040-201ENST00000425048 RALYLQ86SE5 291 aaKnown RBP7.87□□□□□ -1.15
LINC01040-201ENST00000425048 ZFPM1Q8IX07 1006 aa7.87□□□□□ -1.15
LINC01040-201ENST00000425048 Q8TCH9 128 aa7.87□□□□□ -1.15
LINC01040-201ENST00000425048 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.87□□□□□ -1.15
LINC01040-201ENST00000425048 PHF20Q9BVI0 1012 aa7.87□□□□□ -1.15
LINC01040-201ENST00000425048 PDGFDQ9GZP0 370 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms