RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 SLC5A5Q92911 643 aa15.15■□□□□ 0.02
PRPF39-202ENST00000424478 MMTAG2Q9BU76 263 aaKnown RBP15.15■□□□□ 0.02
PRPF39-202ENST00000424478 ASB14A6NK59 587 aa15.15■□□□□ 0.02
PRPF39-202ENST00000424478 CUTAO60888 179 aa15.15■□□□□ 0.02
PRPF39-202ENST00000424478 TXNP10599 105 aaKnown RBP15.15■□□□□ 0.02
PRPF39-202ENST00000424478 UBE2HP62256 183 aa15.15■□□□□ 0.02
PRPF39-202ENST00000424478 DHX8Q14562 1220 aaKnown RBP15.15■□□□□ 0.02
PRPF39-202ENST00000424478 CCDC144BQ3MJ40 725 aa15.15■□□□□ 0.02
PRPF39-202ENST00000424478 OTOP1Q7RTM1 612 aa15.15■□□□□ 0.02
PRPF39-202ENST00000424478 JMYQ8N9B5 988 aa15.15■□□□□ 0.02
PRPF39-202ENST00000424478 TRPV1Q8NER1 839 aa15.15■□□□□ 0.02
PRPF39-202ENST00000424478 RASSF8Q8NHQ8 419 aa15.15■□□□□ 0.02
PRPF39-202ENST00000424478 CFHR5Q9BXR6 569 aa15.15■□□□□ 0.02
PRPF39-202ENST00000424478 TMEM150BA6NC51 233 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 SPATA31C2B4DYI2 1134 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 GGPS1O95749 300 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 CASP1P29466 404 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 CNGA1P29973 690 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 ACVR2BQ13705 512 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 CTTNQ14247 550 aaKnown RBP15.14■□□□□ 0.01
PRPF39-202ENST00000424478 GNPTABQ3T906 1256 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 NLRX1Q86UT6 975 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 BANK1Q8NDB2 785 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 SOCS4Q8WXH5 440 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 DACT1Q9NYF0 836 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 SRRDQ9UH36 339 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 POTEFA5A3E0 1075 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 POLR2DO15514 142 aaKnown RBP15.14■□□□□ 0.01
PRPF39-202ENST00000424478 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
PRPF39-202ENST00000424478 SETQ01105 290 aaPredicted RBP15.14■□□□□ 0.01
PRPF39-202ENST00000424478 SH3TC2Q8TF17 1288 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 MRPS27Q92552 414 aaKnown RBP15.14■□□□□ 0.01
PRPF39-202ENST00000424478 DHX58Q96C10 678 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 WRAP73Q9P2S5 460 aaPredicted RBP15.14■□□□□ 0.01
PRPF39-202ENST00000424478 POTEB3A0JP26 581 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 DDX11L8A8MPP1 907 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 HSDL1Q3SXM5 330 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 RESP18Q5W5W9 173 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 POTEBQ6S5H4 581 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 IGSF22Q8N9C0 903 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 SNX29Q8TEQ0 813 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 FERMT2Q96AC1 680 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 GPRASP2Q96D09 838 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 POLD4Q9HCU8 107 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 PTCH2Q9Y6C5 1203 aa15.14■□□□□ 0.01
PRPF39-202ENST00000424478 MED24O75448 989 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 BMP15O95972 392 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 LBX1P52954 281 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 ARL6IP4Q66PJ3 421 aaKnown RBP15.13■□□□□ 0.01
PRPF39-202ENST00000424478 OLFML2BQ68BL8 750 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 CAVIN1Q6NZI2 390 aaKnown RBP15.13■□□□□ 0.01
PRPF39-202ENST00000424478 POTEGQ6S5H5 508 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 KCNK18Q7Z418 384 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 TRIM50Q86XT4 487 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 RAET1EQ8TD07 263 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 SAGE1Q9NXZ1 904 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 DDX41Q9UJV9 622 aaKnown RBP15.13■□□□□ 0.01
PRPF39-202ENST00000424478 ZNF236Q9UL36 1845 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 TRAK2O60296 914 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 HOXC6P09630 235 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 SMPD1P17405 629 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 CHMP4BP1P59074 171 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 UGCGQ16739 394 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 TMEM266Q2M3C6 531 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 MAMDC4Q6UXC1 1216 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 TEKT3Q9BXF9 490 aa15.13■□□□□ 0.01
PRPF39-202ENST00000424478 ADCY3O60266 1144 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 PRPHP41219 470 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 UBA7P41226 1012 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 SNW1Q13573 536 aaKnown RBP15.12■□□□□ 0.01
PRPF39-202ENST00000424478 CSPP1Q1MSJ5 1256 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 CABP7Q86V35 215 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 SLFN12Q8IYM2 578 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 DYDC2Q96IM9 177 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 FAM20AQ96MK3 541 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 KCNH3Q9ULD8 1083 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 LAD1O00515 517 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 HSPA1AP0DMV8 641 aaKnown RBP15.12■□□□□ 0.01
PRPF39-202ENST00000424478 HSPA1BP0DMV9 641 aaKnown RBP15.12■□□□□ 0.01
PRPF39-202ENST00000424478 CMA1P23946 247 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 CCND3P30281 292 aaPredicted RBP15.12■□□□□ 0.01
PRPF39-202ENST00000424478 FXR2P51116 673 aaKnown RBP eCLIP15.12■□□□□ 0.01
PRPF39-202ENST00000424478 PSMC6P62333 389 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 LONRF3Q496Y0 759 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 MORC4Q8TE76 937 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 NAP1L4Q99733 375 aaKnown RBP15.12■□□□□ 0.01
PRPF39-202ENST00000424478 BMP2KQ9NSY1 1161 aaPredicted RBP15.12■□□□□ 0.01
PRPF39-202ENST00000424478 SLC5A4Q9NY91 659 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 CACNB2Q08289 660 aaPredicted RBP15.12■□□□□ 0.01
PRPF39-202ENST00000424478 CCDC62Q6P9F0 684 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 TPH2Q8IWU9 490 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 ERO1AQ96HE7 468 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 MLXIPQ9HAP2 919 aa15.12■□□□□ 0.01
PRPF39-202ENST00000424478 JPH1Q9HDC5 661 aaPredicted RBP15.12■□□□□ 0.01
PRPF39-202ENST00000424478 ZNF865P0CJ78 1059 aaPredicted RBP15.11■□□□□ 0.01
PRPF39-202ENST00000424478 CCT6AP40227 531 aaKnown RBP15.11■□□□□ 0.01
PRPF39-202ENST00000424478 XRRA1Q6P2D8 792 aa15.11■□□□□ 0.01
PRPF39-202ENST00000424478 PIGOQ8TEQ8 1089 aa15.11■□□□□ 0.01
PRPF39-202ENST00000424478 PNMA5Q96PV4 448 aa15.11■□□□□ 0.01
PRPF39-202ENST00000424478 EIF2AK1Q9BQI3 630 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms