RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 OTOP2Q7RTS6 562 aa17.75■□□□□ 0.43
SPC24-201ENST00000423327 TRIM50Q86XT4 487 aa17.75■□□□□ 0.43
SPC24-201ENST00000423327 ZNF713Q8N859 430 aaPredicted RBP17.75■□□□□ 0.43
SPC24-201ENST00000423327 GPRASP2Q96D09 838 aa17.75■□□□□ 0.43
SPC24-201ENST00000423327 SENP7Q9BQF6 1050 aa17.75■□□□□ 0.43
SPC24-201ENST00000423327 KATNAL1Q9BW62 490 aa17.75■□□□□ 0.43
SPC24-201ENST00000423327 UPF3BQ9BZI7 483 aaKnown RBP17.75■□□□□ 0.43
SPC24-201ENST00000423327 TMEM260Q9NX78 707 aa17.75■□□□□ 0.43
SPC24-201ENST00000423327 PTPRSQ13332 1948 aa17.74■□□□□ 0.43
SPC24-201ENST00000423327 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.74■□□□□ 0.43
SPC24-201ENST00000423327 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.74■□□□□ 0.43
SPC24-201ENST00000423327 SPDYE3A6NKU9 549 aa17.74■□□□□ 0.43
SPC24-201ENST00000423327 PDIA3P30101 505 aaKnown RBP17.74■□□□□ 0.43
SPC24-201ENST00000423327 PBX2P40425 430 aa17.74■□□□□ 0.43
SPC24-201ENST00000423327 ADCY7P51828 1080 aa17.74■□□□□ 0.43
SPC24-201ENST00000423327 RBL2Q08999 1139 aa17.74■□□□□ 0.43
SPC24-201ENST00000423327 TRIM71Q2Q1W2 868 aaKnown RBP17.74■□□□□ 0.43
SPC24-201ENST00000423327 ZNF697Q5TEC3 545 aa17.74■□□□□ 0.43
SPC24-201ENST00000423327 TRAF7Q6Q0C0 670 aa17.74■□□□□ 0.43
SPC24-201ENST00000423327 DEFB128Q7Z7B8 93 aa17.74■□□□□ 0.43
SPC24-201ENST00000423327 CYP2W1Q8TAV3 490 aa17.74■□□□□ 0.43
SPC24-201ENST00000423327 PHKBQ93100 1093 aa17.74■□□□□ 0.43
SPC24-201ENST00000423327 ANO3Q9BYT9 981 aa17.74■□□□□ 0.43
SPC24-201ENST00000423327 NCOA5Q9HCD5 579 aaKnown RBP17.74■□□□□ 0.43
SPC24-201ENST00000423327 SMCO2A6NFE2 343 aa17.73■□□□□ 0.43
SPC24-201ENST00000423327 FGBP02675 491 aa17.73■□□□□ 0.43
SPC24-201ENST00000423327 SCG2P13521 617 aa17.73■□□□□ 0.43
SPC24-201ENST00000423327 DNAJB2P25686 324 aa17.73■□□□□ 0.43
SPC24-201ENST00000423327 CCT2P78371 535 aaKnown RBP17.73■□□□□ 0.43
SPC24-201ENST00000423327 SP4Q02446 784 aa17.73■□□□□ 0.43
SPC24-201ENST00000423327 NLRX1Q86UT6 975 aa17.73■□□□□ 0.43
SPC24-201ENST00000423327 C7orf31Q8N865 590 aa17.73■□□□□ 0.43
SPC24-201ENST00000423327 LARP6Q9BRS8 491 aaKnown RBP17.73■□□□□ 0.43
SPC24-201ENST00000423327 PBX4Q9BYU1 374 aa17.73■□□□□ 0.43
SPC24-201ENST00000423327 TM6SF1Q9BZW5 370 aa17.73■□□□□ 0.43
SPC24-201ENST00000423327 SEMA6BQ9H3T3 888 aa17.73■□□□□ 0.43
SPC24-201ENST00000423327 NOD1Q9Y239 953 aa17.73■□□□□ 0.43
SPC24-201ENST00000423327 EYSQ5T1H1 3165 aa17.73■□□□□ 0.43
SPC24-201ENST00000423327 CHD9Q3L8U1 2897 aa17.72■□□□□ 0.43
SPC24-201ENST00000423327 CCDC196A0A1B0GTZ2 297 aa17.72■□□□□ 0.43
SPC24-201ENST00000423327 PRPF3O43395 683 aaKnown RBP17.72■□□□□ 0.43
SPC24-201ENST00000423327 CENPBP07199 599 aaPredicted RBP17.72■□□□□ 0.43
SPC24-201ENST00000423327 CAGE1Q8TC20 777 aa17.72■□□□□ 0.43
SPC24-201ENST00000423327 JADE2Q9NQC1 790 aa17.72■□□□□ 0.43
SPC24-201ENST00000423327 PKD2L1Q9P0L9 805 aa17.72■□□□□ 0.43
SPC24-201ENST00000423327 STXBP5LQ9Y2K9 1186 aa17.72■□□□□ 0.43
SPC24-201ENST00000423327 ESYT2A0FGR8 921 aa17.71■□□□□ 0.43
SPC24-201ENST00000423327 H3BRB1 525 aa17.71■□□□□ 0.43
SPC24-201ENST00000423327 NOP56O00567 594 aaKnown RBP17.71■□□□□ 0.43
SPC24-201ENST00000423327 SMIM10L2AP0DMW4 78 aa17.71■□□□□ 0.43
SPC24-201ENST00000423327 SMIM10L2BP0DMW5 78 aa17.71■□□□□ 0.43
SPC24-201ENST00000423327 IFNAR1P17181 557 aa17.71■□□□□ 0.43
SPC24-201ENST00000423327 SREBF1P36956 1147 aa17.71■□□□□ 0.43
SPC24-201ENST00000423327 PTK7Q13308 1070 aa17.71■□□□□ 0.43
SPC24-201ENST00000423327 BFSP2Q13515 415 aa17.71■□□□□ 0.43
SPC24-201ENST00000423327 MTMR1Q13613 665 aa17.71■□□□□ 0.43
SPC24-201ENST00000423327 TCTN1Q2MV58 587 aa17.71■□□□□ 0.43
SPC24-201ENST00000423327 AFAP1L1Q8TED9 768 aa17.71■□□□□ 0.43
SPC24-201ENST00000423327 CRYGNQ8WXF5 182 aa17.71■□□□□ 0.43
SPC24-201ENST00000423327 MXRA8Q9BRK3 442 aa17.71■□□□□ 0.43
SPC24-201ENST00000423327 ZMYND12Q9H0C1 365 aa17.71■□□□□ 0.43
SPC24-201ENST00000423327 TUT1Q9H6E5 874 aaKnown RBP17.71■□□□□ 0.43
SPC24-201ENST00000423327 CYP46A1Q9Y6A2 500 aa17.71■□□□□ 0.43
SPC24-201ENST00000423327 TMEM265A0A087WTH1 108 aa17.7■□□□□ 0.42
SPC24-201ENST00000423327 GSTTP1A0A1W2PQM5 241 aa17.7■□□□□ 0.42
SPC24-201ENST00000423327 PFKMP08237 780 aa17.7■□□□□ 0.42
SPC24-201ENST00000423327 ARP10275 920 aa17.7■□□□□ 0.42
SPC24-201ENST00000423327 CKBP12277 381 aa17.7■□□□□ 0.42
SPC24-201ENST00000423327 RFC2P35250 354 aa17.7■□□□□ 0.42
SPC24-201ENST00000423327 AP3B2Q13367 1082 aa17.7■□□□□ 0.42
SPC24-201ENST00000423327 MBTPS1Q14703 1052 aa17.7■□□□□ 0.42
SPC24-201ENST00000423327 UTP14CQ5TAP6 766 aaKnown RBP17.7■□□□□ 0.42
SPC24-201ENST00000423327 JAKMIP3Q5VZ66 844 aa17.7■□□□□ 0.42
SPC24-201ENST00000423327 LRRC8DQ7L1W4 858 aa17.7■□□□□ 0.42
SPC24-201ENST00000423327 TEX2Q8IWB9 1127 aa17.7■□□□□ 0.42
SPC24-201ENST00000423327 RPUSD2Q8IZ73 545 aaKnown RBP17.7■□□□□ 0.42
SPC24-201ENST00000423327 CDX2Q99626 313 aaPredicted RBP17.7■□□□□ 0.42
SPC24-201ENST00000423327 RNF26Q9BY78 433 aaPredicted RBP17.7■□□□□ 0.42
SPC24-201ENST00000423327 RNPEPQ9H4A4 650 aa17.7■□□□□ 0.42
SPC24-201ENST00000423327 KCNH7Q9NS40 1196 aa17.7■□□□□ 0.42
SPC24-201ENST00000423327 YBX2Q9Y2T7 364 aaKnown RBP17.7■□□□□ 0.42
SPC24-201ENST00000423327 NBNO60934 754 aa17.69■□□□□ 0.42
SPC24-201ENST00000423327 FOSP01100 380 aaPredicted RBP17.69■□□□□ 0.42
SPC24-201ENST00000423327 SELPP16109 830 aa17.69■□□□□ 0.42
SPC24-201ENST00000423327 TCF7P36402 384 aaPredicted RBP17.69■□□□□ 0.42
SPC24-201ENST00000423327 ADAM17P78536 824 aa17.69■□□□□ 0.42
SPC24-201ENST00000423327 ITGB3BPQ13352 177 aaPredicted RBP17.69■□□□□ 0.42
SPC24-201ENST00000423327 ZNF618Q5T7W0 954 aa17.69■□□□□ 0.42
SPC24-201ENST00000423327 SERINC5Q86VE9 423 aa17.69■□□□□ 0.42
SPC24-201ENST00000423327 RETREG2Q8NC44 543 aa17.69■□□□□ 0.42
SPC24-201ENST00000423327 RASGRP4Q8TDF6 673 aa17.69■□□□□ 0.42
SPC24-201ENST00000423327 TIFAQ96CG3 184 aa17.69■□□□□ 0.42
SPC24-201ENST00000423327 CDHR1Q96JP9 859 aa17.69■□□□□ 0.42
SPC24-201ENST00000423327 PCYT2Q99447 389 aa17.69■□□□□ 0.42
SPC24-201ENST00000423327 SLC26A6Q9BXS9 759 aa17.69■□□□□ 0.42
SPC24-201ENST00000423327 EHMT1Q9H9B1 1298 aa17.69■□□□□ 0.42
SPC24-201ENST00000423327 SIP14410 1827 aa17.69■□□□□ 0.42
SPC24-201ENST00000423327 CHD7Q9P2D1 2997 aa17.69■□□□□ 0.42
SPC24-201ENST00000423327 C17orf102A2RUQ5 167 aa17.68■□□□□ 0.42
SPC24-201ENST00000423327 FAM86B1E9PN63 330 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms