RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 CCNT1O60563 726 aaKnown RBP10.53□□□□□ -0.72
PDGFC-202ENST00000422544 ADAMTS4O75173 837 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 GGPS1O95749 300 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 GH1P01241 217 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 KCNA2P16389 499 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 UBA1P22314 1058 aaKnown RBP10.53□□□□□ -0.72
PDGFC-202ENST00000422544 CYP3A7P24462 503 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 BEX3Q00994 111 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 ARHGAP1Q07960 439 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 NEDD9Q14511 834 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 LRRC41Q15345 812 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 GNASQ5JWF2 1037 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 CELF3Q5SZQ8 465 aaKnown RBP10.53□□□□□ -0.72
PDGFC-202ENST00000422544 CYFIP1Q7L576 1253 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 RNF180Q86T96 592 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 KLHDC9Q8NEP7 349 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 AFG1LQ8WV93 481 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 LENG9Q96B70 501 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 SENP7Q9BQF6 1050 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 UPF3AQ9H1J1 476 aaKnown RBP10.53□□□□□ -0.72
PDGFC-202ENST00000422544 MLXIPQ9HAP2 919 aa10.53□□□□□ -0.72
PDGFC-202ENST00000422544 AGO4Q9HCK5 861 aaKnown RBP10.53□□□□□ -0.72
PDGFC-202ENST00000422544 DDX25Q9UHL0 483 aaKnown RBP10.53□□□□□ -0.72
PDGFC-202ENST00000422544 DNM1LO00429 736 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 WNT7AO00755 349 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 MNX1P50219 401 aaPredicted RBP10.52□□□□□ -0.73
PDGFC-202ENST00000422544 NKX3-2P78367 333 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 SP4Q02446 784 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 LAMC2Q13753 1193 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 KCNA10Q16322 511 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 FSCN1Q16658 493 aaKnown RBP10.52□□□□□ -0.73
PDGFC-202ENST00000422544 Q4G0T1 1027 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 MYSM1Q5VVJ2 828 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 PPP4R3AQ6IN85 833 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 CCSAPQ6IQ19 270 aaPredicted RBP10.52□□□□□ -0.73
PDGFC-202ENST00000422544 MOXD1Q6UVY6 613 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 FERMT3Q86UX7 667 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 DIS3LQ8TF46 1054 aaKnown RBP10.52□□□□□ -0.73
PDGFC-202ENST00000422544 GJA10Q969M2 543 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 SPATA33Q96N06 139 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 MBOAT7Q96N66 472 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 ZNF577Q9BSK1 485 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 MTMR6Q9Y217 621 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 TELO2Q9Y4R8 837 aa10.52□□□□□ -0.73
PDGFC-202ENST00000422544 A6NJR5 290 aa10.51□□□□□ -0.73
PDGFC-202ENST00000422544 IPO5O00410 1097 aaKnown RBP10.51□□□□□ -0.73
PDGFC-202ENST00000422544 MSH4O15457 936 aa10.51□□□□□ -0.73
PDGFC-202ENST00000422544 STX6O43752 255 aa10.51□□□□□ -0.73
PDGFC-202ENST00000422544 SLC37A4O43826 429 aa10.51□□□□□ -0.73
PDGFC-202ENST00000422544 FARP2O94887 1054 aaPredicted RBP10.51□□□□□ -0.73
PDGFC-202ENST00000422544 GCFC2P16383 781 aaKnown RBP10.51□□□□□ -0.73
PDGFC-202ENST00000422544 CAPN2P17655 700 aa10.51□□□□□ -0.73
PDGFC-202ENST00000422544 TOB1P50616 345 aaPredicted RBP10.51□□□□□ -0.73
PDGFC-202ENST00000422544 SETQ01105 290 aaPredicted RBP10.51□□□□□ -0.73
PDGFC-202ENST00000422544 ITGB3BPQ13352 177 aaPredicted RBP10.51□□□□□ -0.73
PDGFC-202ENST00000422544 NBR1Q14596 966 aa10.51□□□□□ -0.73
PDGFC-202ENST00000422544 ZNF174Q15697 407 aa10.51□□□□□ -0.73
PDGFC-202ENST00000422544 HSDL1Q3SXM5 330 aa10.51□□□□□ -0.73
PDGFC-202ENST00000422544 METTL7BQ6UX53 244 aa10.51□□□□□ -0.73
PDGFC-202ENST00000422544 ANKLE1Q8NAG6 615 aa10.51□□□□□ -0.73
PDGFC-202ENST00000422544 GIMAP8Q8ND71 665 aaPredicted RBP10.51□□□□□ -0.73
PDGFC-202ENST00000422544 SLC17A8Q8NDX2 589 aa10.51□□□□□ -0.73
PDGFC-202ENST00000422544 EMID1Q96A84 441 aaPredicted RBP10.51□□□□□ -0.73
PDGFC-202ENST00000422544 FERMT2Q96AC1 680 aa10.51□□□□□ -0.73
PDGFC-202ENST00000422544 PAWRQ96IZ0 340 aaKnown RBP10.51□□□□□ -0.73
PDGFC-202ENST00000422544 NAP1L4Q99733 375 aaKnown RBP10.51□□□□□ -0.73
PDGFC-202ENST00000422544 SDF4Q9BRK5 362 aa10.51□□□□□ -0.73
PDGFC-202ENST00000422544 SSUH2Q9Y2M2 353 aa10.51□□□□□ -0.73
PDGFC-202ENST00000422544 KBTBD13C9JR72 458 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 DDX39AO00148 427 aaKnown RBP10.5□□□□□ -0.73
PDGFC-202ENST00000422544 NOP56O00567 594 aaKnown RBP10.5□□□□□ -0.73
PDGFC-202ENST00000422544 DHX15O43143 795 aaKnown RBP10.5□□□□□ -0.73
PDGFC-202ENST00000422544 ZEB2O60315 1214 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 MARCH6O60337 910 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 ASGR1P07306 291 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 MMP3P08254 477 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 MYL3P08590 195 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 CST5P28325 142 aaPredicted RBP10.5□□□□□ -0.73
PDGFC-202ENST00000422544 MCM7P33993 719 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 ANP32AP39687 249 aaKnown RBP10.5□□□□□ -0.73
PDGFC-202ENST00000422544 TRAPPC10P48553 1259 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 CPT1AP50416 773 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 ACLYP53396 1101 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 BRDTQ58F21 947 aaPredicted RBP10.5□□□□□ -0.73
PDGFC-202ENST00000422544 TTC38Q5R3I4 469 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 FOXD4L5Q5VV16 416 aaPredicted RBP10.5□□□□□ -0.73
PDGFC-202ENST00000422544 CXCL17Q6UXB2 119 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 PCSK9Q8NBP7 692 aaKnown RBP10.5□□□□□ -0.73
PDGFC-202ENST00000422544 PPTC7Q8NI37 304 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 ETNPPLQ8TBG4 499 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 FOXD4L4Q8WXT5 416 aaPredicted RBP10.5□□□□□ -0.73
PDGFC-202ENST00000422544 GPR20Q99678 358 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 TSEN34Q9BSV6 310 aaKnown RBP10.5□□□□□ -0.73
PDGFC-202ENST00000422544 SENP6Q9GZR1 1112 aaPredicted RBP10.5□□□□□ -0.73
PDGFC-202ENST00000422544 JPH1Q9HDC5 661 aaPredicted RBP10.5□□□□□ -0.73
PDGFC-202ENST00000422544 TSHZ2Q9NRE2 1034 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 NOL7Q9UMY1 257 aaKnown RBP10.5□□□□□ -0.73
PDGFC-202ENST00000422544 PHF24Q9UPV7 400 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 NFASCO94856 1347 aa10.5□□□□□ -0.73
PDGFC-202ENST00000422544 NEMFO60524 1076 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms