RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 FAM163AQ96GL9 167 aaPredicted RBP17.45■□□□□ 0.38
CDH1-202ENST00000422392 ZHX3Q9H4I2 956 aa17.45■□□□□ 0.38
CDH1-202ENST00000422392 RABEP2Q9H5N1 569 aa17.45■□□□□ 0.38
CDH1-202ENST00000422392 FTCDO95954 541 aa17.44■□□□□ 0.38
CDH1-202ENST00000422392 TCP1P17987 556 aaKnown RBP17.44■□□□□ 0.38
CDH1-202ENST00000422392 STAT3P40763 770 aa17.44■□□□□ 0.38
CDH1-202ENST00000422392 RNASE9P60153 205 aaKnown RBP17.44■□□□□ 0.38
CDH1-202ENST00000422392 SHROOM1Q2M3G4 852 aaPredicted RBP17.44■□□□□ 0.38
CDH1-202ENST00000422392 TSEN2Q8NCE0 465 aaKnown RBP17.44■□□□□ 0.38
CDH1-202ENST00000422392 ABCB11O95342 1321 aa17.44■□□□□ 0.38
CDH1-202ENST00000422392 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.44■□□□□ 0.38
CDH1-202ENST00000422392 hCG_1984214I3L0E3 225 aa17.44■□□□□ 0.38
CDH1-202ENST00000422392 PJA2O43164 708 aa17.44■□□□□ 0.38
CDH1-202ENST00000422392 TTLL1O95922 423 aa17.44■□□□□ 0.38
CDH1-202ENST00000422392 CLK2P49760 499 aaKnown RBP17.44■□□□□ 0.38
CDH1-202ENST00000422392 SCNN1DP51172 638 aa17.44■□□□□ 0.38
CDH1-202ENST00000422392 PSMD2Q13200 908 aa17.44■□□□□ 0.38
CDH1-202ENST00000422392 PPP4R3AQ6IN85 833 aa17.44■□□□□ 0.38
CDH1-202ENST00000422392 DNAAF5Q86Y56 855 aa17.44■□□□□ 0.38
CDH1-202ENST00000422392 ZNF713Q8N859 430 aaPredicted RBP17.44■□□□□ 0.38
CDH1-202ENST00000422392 TBC1D5Q92609 795 aa17.44■□□□□ 0.38
CDH1-202ENST00000422392 CUL5Q93034 780 aa17.44■□□□□ 0.38
CDH1-202ENST00000422392 EHD4Q9H223 541 aa17.44■□□□□ 0.38
CDH1-202ENST00000422392 LRRC4BQ9NT99 713 aa17.44■□□□□ 0.38
CDH1-202ENST00000422392 IGKV6D-41A0A0C4DH26 115 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 ESYT3A0FGR9 886 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 RPS6KA5O75582 802 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 PRLRP16471 622 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 SFMBT2Q5VUG0 894 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 NOX5Q96PH1 765 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.43■□□□□ 0.38
CDH1-202ENST00000422392 PACSIN1Q9BY11 444 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 PSTPIP2Q9H939 334 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 STIM2Q9P246 746 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 GOLGA6CA6NDK9 693 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 GOLGA6DP0CG33 693 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 KLRC1P26715 233 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 RAPGEF1Q13905 1077 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 VPS72Q15906 364 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 KCTD19Q17RG1 926 aaPredicted RBP17.43■□□□□ 0.38
CDH1-202ENST00000422392 SLC9C1Q4G0N8 1177 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 HERC4Q5GLZ8 1057 aaPredicted RBP17.43■□□□□ 0.38
CDH1-202ENST00000422392 ZNF572Q7Z3I7 529 aaPredicted RBP17.43■□□□□ 0.38
CDH1-202ENST00000422392 SLF2Q8IX21 1173 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 FAM133AQ8N9E0 248 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 POLD4Q9HCU8 107 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 GOLGA6AQ9NYA3 693 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 CEP72Q9P209 647 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 SERPINB13Q9UIV8 391 aa17.43■□□□□ 0.38
CDH1-202ENST00000422392 FAM196BA6NMK8 535 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 PALMO75781 387 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 SERPINB2P05120 415 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 PAFAH1B1P43034 410 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 CRY2Q49AN0 593 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 DNAJC21Q5F1R6 531 aaKnown RBP17.42■□□□□ 0.38
CDH1-202ENST00000422392 TTC19Q6DKK2 380 aaPredicted RBP17.42■□□□□ 0.38
CDH1-202ENST00000422392 C8orf74Q6P047 294 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 GPBP1Q86WP2 473 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 CERS5Q8N5B7 392 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 SCFD1Q8WVM8 642 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 PLIN4Q96Q06 1357 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 ADAMTS1Q9UHI8 967 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.42■□□□□ 0.38
CDH1-202ENST00000422392 SSU72P8A0A1W2PR75 194 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 PLA2G4BP0C869 781 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 SHMT1P34896 483 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 PTPROQ16827 1216 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 PROM2Q8N271 834 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 FAM76AQ8TAV0 307 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 PCDHA2Q9Y5H9 948 aa17.42■□□□□ 0.38
CDH1-202ENST00000422392 A0A087X0T9 212 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 GLI1P08151 1106 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 FAM228BP0C875 321 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 CASP5P51878 434 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 TBC1D22AQ8WUA7 517 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 POTEFA5A3E0 1075 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 ZBTB5O15062 677 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 POTEIP0CG38 1075 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 ACTN1P12814 892 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 ITIH3Q06033 890 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 POTEGQ6S5H5 508 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 POTEEQ6S8J3 1075 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 RBM17Q96I25 401 aaKnown RBP17.41■□□□□ 0.38
CDH1-202ENST00000422392 LRRC27Q9C0I9 530 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 RASSF4Q9H2L5 321 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 EMILIN3Q9NT22 766 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 USP40Q9NVE5 1235 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 LY75O60449 1722 aa17.41■□□□□ 0.38
CDH1-202ENST00000422392 VGLL3A8MV65 326 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 MED24O75448 989 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 SERPING1P05155 500 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 MRPL12P52815 198 aaKnown RBP17.4■□□□□ 0.38
CDH1-202ENST00000422392 SNAP25P60880 206 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 TRIM59Q8IWR1 403 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 GOLPH3Q9H4A6 298 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 BMP2KQ9NSY1 1161 aaPredicted RBP17.4■□□□□ 0.38
CDH1-202ENST00000422392 ATP6V0A2Q9Y487 856 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 MEIS1O00470 390 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 GYS1P13807 737 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 TAL1P17542 331 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms