RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 FOSP01100 380 aaPredicted RBP25.08■■□□□ 1.61
TRAF4-204ENST00000422344 CYP2C9P11712 490 aa25.08■■□□□ 1.61
TRAF4-204ENST00000422344 PDIA3P30101 505 aaKnown RBP25.08■■□□□ 1.61
TRAF4-204ENST00000422344 PSEN2P49810 448 aa25.08■■□□□ 1.61
TRAF4-204ENST00000422344 EVCP57679 992 aa25.08■■□□□ 1.61
TRAF4-204ENST00000422344 CCT2P78371 535 aaKnown RBP25.08■■□□□ 1.61
TRAF4-204ENST00000422344 C7orf31Q8N865 590 aa25.08■■□□□ 1.61
TRAF4-204ENST00000422344 CCDC12Q8WUD4 166 aaPredicted RBP25.08■■□□□ 1.61
TRAF4-204ENST00000422344 KAT2BQ92831 832 aa25.08■■□□□ 1.61
TRAF4-204ENST00000422344 GPRASP2Q96D09 838 aa25.08■■□□□ 1.61
TRAF4-204ENST00000422344 ALG1Q9BT22 464 aa25.08■■□□□ 1.61
TRAF4-204ENST00000422344 PDRG1Q9NUG6 133 aa25.08■■□□□ 1.61
TRAF4-204ENST00000422344 PRPF3O43395 683 aaKnown RBP25.07■■□□□ 1.6
TRAF4-204ENST00000422344 CCL23P55773 120 aa25.07■■□□□ 1.6
TRAF4-204ENST00000422344 TOB2Q14106 344 aaPredicted RBP25.07■■□□□ 1.6
TRAF4-204ENST00000422344 MFSD10Q14728 455 aa25.07■■□□□ 1.6
TRAF4-204ENST00000422344 METTL7BQ6UX53 244 aa25.07■■□□□ 1.6
TRAF4-204ENST00000422344 CYFIP1Q7L576 1253 aa25.07■■□□□ 1.6
TRAF4-204ENST00000422344 GIMAP8Q8ND71 665 aaPredicted RBP25.07■■□□□ 1.6
TRAF4-204ENST00000422344 UMODL1Q5DID0 1318 aa25.07■■□□□ 1.6
TRAF4-204ENST00000422344 F2P00734 622 aa25.06■■□□□ 1.6
TRAF4-204ENST00000422344 HOXD8P13378 290 aaPredicted RBP25.06■■□□□ 1.6
TRAF4-204ENST00000422344 SEMA3FQ13275 785 aa25.06■■□□□ 1.6
TRAF4-204ENST00000422344 PTGISQ16647 500 aa25.06■■□□□ 1.6
TRAF4-204ENST00000422344 KIAA0753Q2KHM9 967 aa25.06■■□□□ 1.6
TRAF4-204ENST00000422344 HERVK_113Q902F9 699 aa25.06■■□□□ 1.6
TRAF4-204ENST00000422344 PHKBQ93100 1093 aa25.06■■□□□ 1.6
TRAF4-204ENST00000422344 SLC26A6Q9BXS9 759 aa25.06■■□□□ 1.6
TRAF4-204ENST00000422344 CXXC1Q9P0U4 656 aaPredicted RBP25.06■■□□□ 1.6
TRAF4-204ENST00000422344 MSRAQ9UJ68 235 aa25.06■■□□□ 1.6
TRAF4-204ENST00000422344 FGBP02675 491 aa25.05■■□□□ 1.6
TRAF4-204ENST00000422344 AP3B2Q13367 1082 aa25.05■■□□□ 1.6
TRAF4-204ENST00000422344 MTMR1Q13613 665 aa25.05■■□□□ 1.6
TRAF4-204ENST00000422344 SESTD1Q86VW0 696 aa25.05■■□□□ 1.6
TRAF4-204ENST00000422344 CCDC155Q8N6L0 562 aa25.05■■□□□ 1.6
TRAF4-204ENST00000422344 RETREG2Q8NC44 543 aa25.05■■□□□ 1.6
TRAF4-204ENST00000422344 SENP7Q9BQF6 1050 aa25.05■■□□□ 1.6
TRAF4-204ENST00000422344 RNF26Q9BY78 433 aaPredicted RBP25.05■■□□□ 1.6
TRAF4-204ENST00000422344 ANO3Q9BYT9 981 aa25.05■■□□□ 1.6
TRAF4-204ENST00000422344 NCOA5Q9HCD5 579 aaKnown RBP25.05■■□□□ 1.6
TRAF4-204ENST00000422344 C6orf50Q9HD87 102 aa25.05■■□□□ 1.6
TRAF4-204ENST00000422344 MUC3AQ02505 3323 aa25.04■■□□□ 1.6
TRAF4-204ENST00000422344 CPLX1O14810 134 aa25.04■■□□□ 1.6
TRAF4-204ENST00000422344 IFNAR1P17181 557 aa25.04■■□□□ 1.6
TRAF4-204ENST00000422344 ITGB5P18084 799 aa25.04■■□□□ 1.6
TRAF4-204ENST00000422344 ANAPC15P60006 121 aa25.04■■□□□ 1.6
TRAF4-204ENST00000422344 SP4Q02446 784 aa25.04■■□□□ 1.6
TRAF4-204ENST00000422344 BFSP2Q13515 415 aa25.04■■□□□ 1.6
TRAF4-204ENST00000422344 RAB30Q15771 203 aa25.04■■□□□ 1.6
TRAF4-204ENST00000422344 OTOP2Q7RTS6 562 aa25.04■■□□□ 1.6
TRAF4-204ENST00000422344 TRIM22Q8IYM9 498 aa25.04■■□□□ 1.6
TRAF4-204ENST00000422344 ZNF274Q96GC6 653 aaPredicted RBP25.04■■□□□ 1.6
TRAF4-204ENST00000422344 PGBD1Q96JS3 809 aa25.04■■□□□ 1.6
TRAF4-204ENST00000422344 MTIF3Q9H2K0 278 aaKnown RBP25.04■■□□□ 1.6
TRAF4-204ENST00000422344 UBIAD1Q9Y5Z9 338 aa25.04■■□□□ 1.6
TRAF4-204ENST00000422344 GBF1Q92538 1859 aa25.03■■□□□ 1.6
TRAF4-204ENST00000422344 PPFIA3O75145 1194 aa25.03■■□□□ 1.6
TRAF4-204ENST00000422344 GDF6Q6KF10 455 aaPredicted RBP25.03■■□□□ 1.6
TRAF4-204ENST00000422344 CPLX2Q6PUV4 134 aaKnown RBP25.03■■□□□ 1.6
TRAF4-204ENST00000422344 RPUSD2Q8IZ73 545 aaKnown RBP25.03■■□□□ 1.6
TRAF4-204ENST00000422344 LARP6Q9BRS8 491 aaKnown RBP25.03■■□□□ 1.6
TRAF4-204ENST00000422344 WNT8AQ9H1J5 351 aa25.03■■□□□ 1.6
TRAF4-204ENST00000422344 NKX2-4Q9H2Z4 354 aa25.03■■□□□ 1.6
TRAF4-204ENST00000422344 BCAS3Q9H6U6 928 aa25.03■■□□□ 1.6
TRAF4-204ENST00000422344 JADE2Q9NQC1 790 aa25.03■■□□□ 1.6
TRAF4-204ENST00000422344 TMEM260Q9NX78 707 aa25.03■■□□□ 1.6
TRAF4-204ENST00000422344 HDAC6Q9UBN7 1215 aa25.03■■□□□ 1.6
TRAF4-204ENST00000422344 GTF2IRD1Q9UHL9 959 aa25.03■■□□□ 1.6
TRAF4-204ENST00000422344 CHD7Q9P2D1 2997 aa25.02■■□□□ 1.6
TRAF4-204ENST00000422344 ESYT2A0FGR8 921 aa25.02■■□□□ 1.6
TRAF4-204ENST00000422344 HAS3O00219 553 aa25.02■■□□□ 1.6
TRAF4-204ENST00000422344 MAFGO15525 162 aa25.02■■□□□ 1.6
TRAF4-204ENST00000422344 LGALS2P05162 132 aa25.02■■□□□ 1.6
TRAF4-204ENST00000422344 ADGRE1Q14246 886 aa25.02■■□□□ 1.6
TRAF4-204ENST00000422344 NTRK3Q16288 839 aa25.02■■□□□ 1.6
TRAF4-204ENST00000422344 PKN1Q16512 942 aa25.02■■□□□ 1.6
TRAF4-204ENST00000422344 MCTP2Q6DN12 878 aa25.02■■□□□ 1.6
TRAF4-204ENST00000422344 CCDC148Q8NFR7 591 aa25.02■■□□□ 1.6
TRAF4-204ENST00000422344 SCLYQ96I15 445 aa25.02■■□□□ 1.6
TRAF4-204ENST00000422344 GPR20Q99678 358 aa25.02■■□□□ 1.6
TRAF4-204ENST00000422344 PKD2L1Q9P0L9 805 aa25.02■■□□□ 1.6
TRAF4-204ENST00000422344 H3BRB1 525 aa25.01■■□□□ 1.59
TRAF4-204ENST00000422344 TNFRSF10AO00220 468 aa25.01■■□□□ 1.59
TRAF4-204ENST00000422344 PITPNM1O00562 1244 aa25.01■■□□□ 1.59
TRAF4-204ENST00000422344 IGFBP4P22692 258 aa25.01■■□□□ 1.59
TRAF4-204ENST00000422344 GNA11P29992 359 aa25.01■■□□□ 1.59
TRAF4-204ENST00000422344 ZNF76P36508 570 aa25.01■■□□□ 1.59
TRAF4-204ENST00000422344 SSRP1Q08945 709 aaKnown RBP25.01■■□□□ 1.59
TRAF4-204ENST00000422344 STK3Q13188 491 aa25.01■■□□□ 1.59
TRAF4-204ENST00000422344 CCDC85BQ15834 202 aaPredicted RBP25.01■■□□□ 1.59
TRAF4-204ENST00000422344 JAKMIP3Q5VZ66 844 aa25.01■■□□□ 1.59
TRAF4-204ENST00000422344 MXRA8Q9BRK3 442 aa25.01■■□□□ 1.59
TRAF4-204ENST00000422344 C16orf70Q9BSU1 422 aa25.01■■□□□ 1.59
TRAF4-204ENST00000422344 ZMYND12Q9H0C1 365 aa25.01■■□□□ 1.59
TRAF4-204ENST00000422344 TUT1Q9H6E5 874 aaKnown RBP25.01■■□□□ 1.59
TRAF4-204ENST00000422344 SLC28A3Q9HAS3 691 aa25.01■■□□□ 1.59
TRAF4-204ENST00000422344 ZNF215Q9UL58 517 aaPredicted RBP25.01■■□□□ 1.59
TRAF4-204ENST00000422344 KCNA2P16389 499 aa25■■□□□ 1.59
TRAF4-204ENST00000422344 SREBF1P36956 1147 aa25■■□□□ 1.59
TRAF4-204ENST00000422344 CLK2P49760 499 aaKnown RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms