RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 KIF3AQ9Y496 699 aa22■■□□□ 1.11
GCDH-202ENST00000421816 CYP3A7-CYP3A51PA0A087WV96 503 aa21.99■■□□□ 1.11
GCDH-202ENST00000421816 SORBS3O60504 671 aa21.99■■□□□ 1.11
GCDH-202ENST00000421816 MYL3P08590 195 aa21.99■■□□□ 1.11
GCDH-202ENST00000421816 CYP3A7P24462 503 aa21.99■■□□□ 1.11
GCDH-202ENST00000421816 ATN1P54259 1190 aaPredicted RBP21.99■■□□□ 1.11
GCDH-202ENST00000421816 SETQ01105 290 aaPredicted RBP21.99■■□□□ 1.11
GCDH-202ENST00000421816 INF2Q27J81 1249 aa21.99■■□□□ 1.11
GCDH-202ENST00000421816 MOXD1Q6UVY6 613 aa21.99■■□□□ 1.11
GCDH-202ENST00000421816 PIK3AP1Q6ZUJ8 805 aa21.99■■□□□ 1.11
GCDH-202ENST00000421816 MBOAT7Q96N66 472 aa21.99■■□□□ 1.11
GCDH-202ENST00000421816 SMC3Q9UQE7 1217 aa21.99■■□□□ 1.11
GCDH-202ENST00000421816 SCN10AQ9Y5Y9 1956 aa21.99■■□□□ 1.11
GCDH-202ENST00000421816 NFASCO94856 1347 aa21.99■■□□□ 1.11
GCDH-202ENST00000421816 PPFIA4O75335 1185 aa21.98■■□□□ 1.11
GCDH-202ENST00000421816 ITGB3BPQ13352 177 aaPredicted RBP21.98■■□□□ 1.11
GCDH-202ENST00000421816 SAFBQ15424 915 aaKnown RBP eCLIP21.98■■□□□ 1.11
GCDH-202ENST00000421816 DGKDQ16760 1214 aa21.98■■□□□ 1.11
GCDH-202ENST00000421816 MTG1Q9BT17 334 aaPredicted RBP21.98■■□□□ 1.11
GCDH-202ENST00000421816 PKD2L1Q9P0L9 805 aa21.98■■□□□ 1.11
GCDH-202ENST00000421816 A0A0U1RQG5 324 aaPredicted RBP21.97■■□□□ 1.11
GCDH-202ENST00000421816 FAM205CA6NFA0 338 aa21.97■■□□□ 1.11
GCDH-202ENST00000421816 Q4G0T1 1027 aa21.97■■□□□ 1.11
GCDH-202ENST00000421816 PRR16Q569H4 304 aa21.97■■□□□ 1.11
GCDH-202ENST00000421816 NEK8Q86SG6 692 aa21.97■■□□□ 1.11
GCDH-202ENST00000421816 SLC43A3Q8NBI5 491 aa21.97■■□□□ 1.11
GCDH-202ENST00000421816 INTS4Q96HW7 963 aaKnown RBP21.97■■□□□ 1.11
GCDH-202ENST00000421816 GPR20Q99678 358 aa21.97■■□□□ 1.11
GCDH-202ENST00000421816 TELO2Q9Y4R8 837 aa21.97■■□□□ 1.11
GCDH-202ENST00000421816 GRIN2DO15399 1336 aa21.97■■□□□ 1.11
GCDH-202ENST00000421816 TDP2O95551 362 aa21.96■■□□□ 1.11
GCDH-202ENST00000421816 CDK7P50613 346 aa21.96■■□□□ 1.11
GCDH-202ENST00000421816 RTP1P59025 263 aa21.96■■□□□ 1.11
GCDH-202ENST00000421816 DPF3Q92784 378 aa21.96■■□□□ 1.11
GCDH-202ENST00000421816 KAT2BQ92831 832 aa21.96■■□□□ 1.11
GCDH-202ENST00000421816 VTI1AQ96AJ9 217 aa21.96■■□□□ 1.11
GCDH-202ENST00000421816 SEZ6LQ9BYH1 1024 aa21.96■■□□□ 1.11
GCDH-202ENST00000421816 FOXP1Q9H334 677 aaPredicted RBP21.96■■□□□ 1.11
GCDH-202ENST00000421816 ARVCFO00192 962 aa21.95■■□□□ 1.1
GCDH-202ENST00000421816 IPO5O00410 1097 aaKnown RBP21.95■■□□□ 1.1
GCDH-202ENST00000421816 DHX15O43143 795 aaKnown RBP21.95■■□□□ 1.1
GCDH-202ENST00000421816 PSMC6P62333 389 aa21.95■■□□□ 1.1
GCDH-202ENST00000421816 ITGA7Q13683 1181 aa21.95■■□□□ 1.1
GCDH-202ENST00000421816 LETM2Q2VYF4 491 aa21.95■■□□□ 1.1
GCDH-202ENST00000421816 TRIM60Q495X7 471 aa21.95■■□□□ 1.1
GCDH-202ENST00000421816 PPP4R3AQ6IN85 833 aa21.95■■□□□ 1.1
GCDH-202ENST00000421816 SDF4Q9BRK5 362 aa21.95■■□□□ 1.1
GCDH-202ENST00000421816 ZNF577Q9BSK1 485 aa21.95■■□□□ 1.1
GCDH-202ENST00000421816 JPH1Q9HDC5 661 aaPredicted RBP21.95■■□□□ 1.1
GCDH-202ENST00000421816 SLC9A2Q9UBY0 812 aa21.95■■□□□ 1.1
GCDH-202ENST00000421816 NOP56O00567 594 aaKnown RBP21.94■■□□□ 1.1
GCDH-202ENST00000421816 MSH4O15457 936 aa21.94■■□□□ 1.1
GCDH-202ENST00000421816 EVI5O60447 810 aa21.94■■□□□ 1.1
GCDH-202ENST00000421816 GCFC2P16383 781 aaKnown RBP21.94■■□□□ 1.1
GCDH-202ENST00000421816 ANKRD33Q7Z3H0 272 aa21.94■■□□□ 1.1
GCDH-202ENST00000421816 HSCBQ8IWL3 235 aa21.94■■□□□ 1.1
GCDH-202ENST00000421816 NAP1L4Q99733 375 aaKnown RBP21.94■■□□□ 1.1
GCDH-202ENST00000421816 C16orf70Q9BSU1 422 aa21.94■■□□□ 1.1
GCDH-202ENST00000421816 TBC1D22BQ9NU19 505 aa21.94■■□□□ 1.1
GCDH-202ENST00000421816 GSTTP1A0A1W2PQM5 241 aa21.93■■□□□ 1.1
GCDH-202ENST00000421816 HAS3O00219 553 aa21.93■■□□□ 1.1
GCDH-202ENST00000421816 F2P00734 622 aa21.93■■□□□ 1.1
GCDH-202ENST00000421816 U2AF2P26368 475 aaKnown RBP eCLIP21.93■■□□□ 1.13e-8■□□□□ 10.2
GCDH-202ENST00000421816 SP4Q02446 784 aa21.93■■□□□ 1.1
GCDH-202ENST00000421816 DNAH12Q6ZR08 3092 aa21.93■■□□□ 1.1
GCDH-202ENST00000421816 SEPT1Q8WYJ6 367 aa21.93■■□□□ 1.1
GCDH-202ENST00000421816 SLC5A5Q92911 643 aa21.93■■□□□ 1.1
GCDH-202ENST00000421816 TOX2Q96NM4 488 aa21.93■■□□□ 1.1
GCDH-202ENST00000421816 DDX25Q9UHL0 483 aaKnown RBP21.93■■□□□ 1.1
GCDH-202ENST00000421816 ATP11BQ9Y2G3 1177 aa21.93■■□□□ 1.1
GCDH-202ENST00000421816 MROH7Q68CQ1 1323 aa21.92■■□□□ 1.1
GCDH-202ENST00000421816 KIF28PB7ZC32 967 aa21.92■■□□□ 1.1
GCDH-202ENST00000421816 SLC37A4O43826 429 aa21.92■■□□□ 1.1
GCDH-202ENST00000421816 LGALS2P05162 132 aa21.92■■□□□ 1.1
GCDH-202ENST00000421816 ZNF286BP0CG31 522 aa21.92■■□□□ 1.1
GCDH-202ENST00000421816 TLE2Q04725 743 aa21.92■■□□□ 1.1
GCDH-202ENST00000421816 NBPF20Q3BBV1 942 aa21.92■■□□□ 1.1
GCDH-202ENST00000421816 NOSTRINQ8IVI9 506 aa21.92■■□□□ 1.1
GCDH-202ENST00000421816 C7orf61Q8IZ16 206 aa21.92■■□□□ 1.1
GCDH-202ENST00000421816 ETNPPLQ8TBG4 499 aa21.92■■□□□ 1.1
GCDH-202ENST00000421816 CCNT1O60563 726 aaKnown RBP21.91■■□□□ 1.1
GCDH-202ENST00000421816 ATG7O95352 703 aa21.91■■□□□ 1.1
GCDH-202ENST00000421816 CCNE2O96020 404 aa21.91■■□□□ 1.1
GCDH-202ENST00000421816 TCF7P36402 384 aaPredicted RBP21.91■■□□□ 1.1
GCDH-202ENST00000421816 PSEN2P49810 448 aa21.91■■□□□ 1.1
GCDH-202ENST00000421816 ACTR2P61160 394 aa21.91■■□□□ 1.1
GCDH-202ENST00000421816 LARP1BQ659C4 914 aaKnown RBP21.91■■□□□ 1.1
GCDH-202ENST00000421816 NFRKBQ6P4R8 1299 aa21.91■■□□□ 1.1
GCDH-202ENST00000421816 UIMC1Q96RL1 719 aa21.91■■□□□ 1.1
GCDH-202ENST00000421816 RIT2Q99578 217 aa21.91■■□□□ 1.1
GCDH-202ENST00000421816 KATNAL1Q9BW62 490 aa21.91■■□□□ 1.1
GCDH-202ENST00000421816 NR2E3Q9Y5X4 410 aa21.91■■□□□ 1.1
GCDH-202ENST00000421816 PDE4DIPQ5VU43 2346 aa21.9■■□□□ 1.1
GCDH-202ENST00000421816 PTPN11Q06124 597 aaPredicted RBP21.9■■□□□ 1.1
GCDH-202ENST00000421816 MFSD10Q14728 455 aa21.9■■□□□ 1.1
GCDH-202ENST00000421816 FAM126BQ8IXS8 530 aa21.9■■□□□ 1.1
GCDH-202ENST00000421816 KCNMB3Q9NPA1 279 aa21.9■■□□□ 1.1
GCDH-202ENST00000421816 EMSYQ7Z589 1322 aa21.89■■□□□ 1.1
GCDH-202ENST00000421816 H3BQV1 296 aa21.89■■□□□ 1.09
GCDH-202ENST00000421816 H3BRB1 525 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms