RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 MTG1Q9BT17 334 aaPredicted RBP17.91■□□□□ 0.46
BRAT1-202ENST00000421712 ELP1O95163 1332 aa17.91■□□□□ 0.46
BRAT1-202ENST00000421712 A0A0U1RQG5 324 aaPredicted RBP17.9■□□□□ 0.46
BRAT1-202ENST00000421712 BTBD18B2RXH4 712 aa17.9■□□□□ 0.46
BRAT1-202ENST00000421712 KCNA2P16389 499 aa17.9■□□□□ 0.46
BRAT1-202ENST00000421712 GJB2P29033 226 aa17.9■□□□□ 0.46
BRAT1-202ENST00000421712 RTP1P59025 263 aa17.9■□□□□ 0.46
BRAT1-202ENST00000421712 PSMC6P62333 389 aa17.9■□□□□ 0.46
BRAT1-202ENST00000421712 PURAQ00577 322 aaKnown RBP17.9■□□□□ 0.46
BRAT1-202ENST00000421712 SETQ01105 290 aaPredicted RBP17.9■□□□□ 0.46
BRAT1-202ENST00000421712 LETM2Q2VYF4 491 aa17.9■□□□□ 0.46
BRAT1-202ENST00000421712 HSDL1Q3SXM5 330 aa17.9■□□□□ 0.46
BRAT1-202ENST00000421712 HSCBQ8IWL3 235 aa17.9■□□□□ 0.46
BRAT1-202ENST00000421712 CRYGNQ8WXF5 182 aa17.9■□□□□ 0.46
BRAT1-202ENST00000421712 AGO4Q9HCK5 861 aaKnown RBP17.9■□□□□ 0.46
BRAT1-202ENST00000421712 NR2E3Q9Y5X4 410 aa17.9■□□□□ 0.46
BRAT1-202ENST00000421712 K7ELQ4 463 aaPredicted RBP17.89■□□□□ 0.45
BRAT1-202ENST00000421712 PPFIA4O75335 1185 aa17.89■□□□□ 0.45
BRAT1-202ENST00000421712 CIITAP33076 1130 aa17.89■□□□□ 0.45
BRAT1-202ENST00000421712 ITGA7Q13683 1181 aa17.89■□□□□ 0.45
BRAT1-202ENST00000421712 TRIM60Q495X7 471 aa17.89■□□□□ 0.45
BRAT1-202ENST00000421712 FBXO18Q8NFZ0 1043 aa17.89■□□□□ 0.45
BRAT1-202ENST00000421712 ZNF577Q9BSK1 485 aa17.89■□□□□ 0.45
BRAT1-202ENST00000421712 H3BQV1 296 aa17.88■□□□□ 0.45
BRAT1-202ENST00000421712 DDX39AO00148 427 aaKnown RBP17.88■□□□□ 0.45
BRAT1-202ENST00000421712 ARVCFO00192 962 aa17.88■□□□□ 0.45
BRAT1-202ENST00000421712 PQBP1O60828 265 aaKnown RBP17.88■□□□□ 0.45
BRAT1-202ENST00000421712 FAM47CQ5HY64 1035 aa17.88■□□□□ 0.45
BRAT1-202ENST00000421712 UTP14CQ5TAP6 766 aaKnown RBP17.88■□□□□ 0.45
BRAT1-202ENST00000421712 NEK8Q86SG6 692 aa17.88■□□□□ 0.45
BRAT1-202ENST00000421712 JPH1Q9HDC5 661 aaPredicted RBP17.88■□□□□ 0.45
BRAT1-202ENST00000421712 FOXD4L1Q9NU39 408 aa17.88■□□□□ 0.45
BRAT1-202ENST00000421712 SLC9A2Q9UBY0 812 aa17.88■□□□□ 0.45
BRAT1-202ENST00000421712 TCEAL9Q9UHQ7 104 aa17.88■□□□□ 0.45
BRAT1-202ENST00000421712 DOCK5Q9H7D0 1870 aa17.87■□□□□ 0.45
BRAT1-202ENST00000421712 IGLV3-22A0A075B6J6 115 aa17.87■□□□□ 0.45
BRAT1-202ENST00000421712 DCDC2CA8MYV0 355 aa17.87■□□□□ 0.45
BRAT1-202ENST00000421712 IPO5O00410 1097 aaKnown RBP17.87■□□□□ 0.45
BRAT1-202ENST00000421712 MARCH6O60337 910 aa17.87■□□□□ 0.45
BRAT1-202ENST00000421712 CCNT1O60563 726 aaKnown RBP17.87■□□□□ 0.45
BRAT1-202ENST00000421712 TDP2O95551 362 aa17.87■□□□□ 0.45
BRAT1-202ENST00000421712 ZNF286BP0CG31 522 aa17.87■□□□□ 0.45
BRAT1-202ENST00000421712 CUL4AQ13619 759 aa17.87■□□□□ 0.45
BRAT1-202ENST00000421712 MCTP1Q6DN14 999 aa17.87■□□□□ 0.45
BRAT1-202ENST00000421712 SEPT1Q8WYJ6 367 aa17.87■□□□□ 0.45
BRAT1-202ENST00000421712 SNX21Q969T3 373 aa17.87■□□□□ 0.45
BRAT1-202ENST00000421712 GPR20Q99678 358 aa17.87■□□□□ 0.45
BRAT1-202ENST00000421712 NAP1L4Q99733 375 aaKnown RBP17.87■□□□□ 0.45
BRAT1-202ENST00000421712 DDX25Q9UHL0 483 aaKnown RBP17.87■□□□□ 0.45
BRAT1-202ENST00000421712 FAM205CA6NFA0 338 aa17.86■□□□□ 0.45
BRAT1-202ENST00000421712 EDIL3O43854 480 aa17.86■□□□□ 0.45
BRAT1-202ENST00000421712 HSP90AA1P07900 732 aaKnown RBP17.86■□□□□ 0.45
BRAT1-202ENST00000421712 ATP2B1P20020 1258 aa17.86■□□□□ 0.45
BRAT1-202ENST00000421712 TLE2Q04725 743 aa17.86■□□□□ 0.45
BRAT1-202ENST00000421712 SNX17Q15036 470 aa17.86■□□□□ 0.45
BRAT1-202ENST00000421712 NBPF20Q3BBV1 942 aa17.86■□□□□ 0.45
BRAT1-202ENST00000421712 EARS2Q5JPH6 523 aaKnown RBP17.86■□□□□ 0.45
BRAT1-202ENST00000421712 C1orf53Q5VUE5 145 aa17.86■□□□□ 0.45
BRAT1-202ENST00000421712 PPP1R13LQ8WUF5 828 aa17.86■□□□□ 0.45
BRAT1-202ENST00000421712 KATNAL1Q9BW62 490 aa17.86■□□□□ 0.45
BRAT1-202ENST00000421712 PRDM5Q9NQX1 630 aaPredicted RBP17.86■□□□□ 0.45
BRAT1-202ENST00000421712 PRKAG2Q9UGJ0 569 aa17.86■□□□□ 0.45
BRAT1-202ENST00000421712 NFASCO94856 1347 aa17.86■□□□□ 0.45
BRAT1-202ENST00000421712 MROH7Q68CQ1 1323 aa17.86■□□□□ 0.45
BRAT1-202ENST00000421712 CYP3A7-CYP3A51PA0A087WV96 503 aa17.85■□□□□ 0.45
BRAT1-202ENST00000421712 TLR3O15455 904 aaKnown RBP17.85■□□□□ 0.45
BRAT1-202ENST00000421712 LGALS2P05162 132 aa17.85■□□□□ 0.45
BRAT1-202ENST00000421712 CYP3A7P24462 503 aa17.85■□□□□ 0.45
BRAT1-202ENST00000421712 TCF7P36402 384 aaPredicted RBP17.85■□□□□ 0.45
BRAT1-202ENST00000421712 PSEN2P49810 448 aa17.85■□□□□ 0.45
BRAT1-202ENST00000421712 ITGB3BPQ13352 177 aaPredicted RBP17.85■□□□□ 0.45
BRAT1-202ENST00000421712 MFSD10Q14728 455 aa17.85■□□□□ 0.45
BRAT1-202ENST00000421712 Q4G0T1 1027 aa17.85■□□□□ 0.45
BRAT1-202ENST00000421712 LARP1BQ659C4 914 aaKnown RBP17.85■□□□□ 0.45
BRAT1-202ENST00000421712 MOXD1Q6UVY6 613 aa17.85■□□□□ 0.45
BRAT1-202ENST00000421712 TNFRSF25Q93038 417 aa17.85■□□□□ 0.45
BRAT1-202ENST00000421712 FOXP1Q9H334 677 aaPredicted RBP17.85■□□□□ 0.45
BRAT1-202ENST00000421712 TBC1D22BQ9NU19 505 aa17.85■□□□□ 0.45
BRAT1-202ENST00000421712 ZMYND8Q9ULU4 1186 aaPredicted RBP17.85■□□□□ 0.45
BRAT1-202ENST00000421712 TELO2Q9Y4R8 837 aa17.85■□□□□ 0.45
BRAT1-202ENST00000421712 GRIN2DO15399 1336 aa17.84■□□□□ 0.45
BRAT1-202ENST00000421712 H3BRB1 525 aa17.84■□□□□ 0.45
BRAT1-202ENST00000421712 MSH4O15457 936 aa17.84■□□□□ 0.45
BRAT1-202ENST00000421712 GCFC2P16383 781 aaKnown RBP17.84■□□□□ 0.45
BRAT1-202ENST00000421712 SYN1P17600 705 aa17.84■□□□□ 0.45
BRAT1-202ENST00000421712 CDK7P50613 346 aa17.84■□□□□ 0.45
BRAT1-202ENST00000421712 KIAA0753Q2KHM9 967 aa17.84■□□□□ 0.45
BRAT1-202ENST00000421712 GLG1Q92896 1179 aa17.84■□□□□ 0.45
BRAT1-202ENST00000421712 SEZ6LQ9BYH1 1024 aa17.84■□□□□ 0.45
BRAT1-202ENST00000421712 TUT1Q9H6E5 874 aaKnown RBP17.84■□□□□ 0.45
BRAT1-202ENST00000421712 DNAH12Q6ZR08 3092 aa17.84■□□□□ 0.45
BRAT1-202ENST00000421712 ALPK3Q96L96 1907 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 GSTTP1A0A1W2PQM5 241 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 H0YGN5 161 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 GAS7O60861 476 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 CLTBP09497 229 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 HOXD8P13378 290 aaPredicted RBP17.83■□□□□ 0.44
BRAT1-202ENST00000421712 ACTR2P61160 394 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 LRCH2Q5VUJ6 765 aa17.83■□□□□ 0.44
BRAT1-202ENST00000421712 PPP4R3AQ6IN85 833 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms