RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.7□□□□□ -1.34
HDAC8-212ENST00000421523 C1QTNF9BB2RNN3 333 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 ATP2A1O14983 1001 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 PPFIA3O75145 1194 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 HMMRO75330 724 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 ITGB1P05556 798 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 IFIT2P09913 472 aaKnown RBP6.7□□□□□ -1.34
HDAC8-212ENST00000421523 C1QTNF9P0C862 333 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 THPOP40225 353 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 TECP42680 631 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 CDK8P49336 464 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 RING1Q06587 406 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 PDE4BQ07343 736 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 RBL2Q08999 1139 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 BTG3Q14201 252 aaPredicted RBP6.7□□□□□ -1.34
HDAC8-212ENST00000421523 PPP2R5BQ15173 497 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 PLEKHG4Q58EX7 1191 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 C16orf86Q6ZW13 317 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.7□□□□□ -1.34
HDAC8-212ENST00000421523 GPR161Q8N6U8 529 aaKnown RBP6.7□□□□□ -1.34
HDAC8-212ENST00000421523 PRPF38AQ8NAV1 312 aaKnown RBP6.7□□□□□ -1.34
HDAC8-212ENST00000421523 MICAL1Q8TDZ2 1067 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 SECISBP2LQ93073 1101 aaKnown RBP6.7□□□□□ -1.34
HDAC8-212ENST00000421523 DNAJC2Q99543 621 aaKnown RBP6.7□□□□□ -1.34
HDAC8-212ENST00000421523 PUS7LQ9H0K6 701 aaKnown RBP6.7□□□□□ -1.34
HDAC8-212ENST00000421523 ARMT1Q9H993 441 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 RNF146Q9NTX7 359 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 LIMD1Q9UGP4 676 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 SWAP70Q9UH65 585 aa6.7□□□□□ -1.34
HDAC8-212ENST00000421523 ISY1Q9ULR0 285 aaKnown RBP6.7□□□□□ -1.34
HDAC8-212ENST00000421523 KIAA1671Q9BY89 1806 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 CYP2D7A0A087X1C5 515 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.69□□□□□ -1.34
HDAC8-212ENST00000421523 A6NJR5 290 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 RSPH10B2B2RC85 870 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 KPNA6O60684 536 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 GABBR2O75899 941 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 MBD4O95243 580 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 MMP3P08254 477 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 CTSHP09668 335 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 RSPH10BP0C881 870 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 NCLP19338 710 aaKnown RBP6.69□□□□□ -1.34
HDAC8-212ENST00000421523 PMLP29590 882 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 TRIM71Q2Q1W2 868 aaKnown RBP6.69□□□□□ -1.34
HDAC8-212ENST00000421523 CTR9Q6PD62 1173 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 UNQ6494/PRO21346Q6UXR6 183 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 LURAP1LQ8IV03 231 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 C7orf31Q8N865 590 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 TDRD5Q8NAT2 981 aaKnown RBP6.69□□□□□ -1.34
HDAC8-212ENST00000421523 KLHL23Q8NBE8 558 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 SPPL3Q8TCT6 385 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 ATP8B4Q8TF62 1192 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 POF1BQ8WVV4 589 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 SEPT8Q92599 483 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 CLP1Q92989 425 aaKnown RBP6.69□□□□□ -1.34
HDAC8-212ENST00000421523 CCDC17Q96LX7 622 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 STRBPQ96SI9 672 aaKnown RBP6.69□□□□□ -1.34
HDAC8-212ENST00000421523 ALG1Q9BT22 464 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 OSBPL7Q9BZF2 842 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 S1PR5Q9H228 398 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 POMKQ9H5K3 350 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 DCTPP1Q9H773 170 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 SLC38A10Q9HBR0 1119 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 PARD6AQ9NPB6 346 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 IGSF5Q9NSI5 407 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 HDAC6Q9UBN7 1215 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 GTF2IRD1Q9UHL9 959 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 RCAN3Q9UKA8 241 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 SMG5Q9UPR3 1016 aaKnown RBP6.69□□□□□ -1.34
HDAC8-212ENST00000421523 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.69□□□□□ -1.34
HDAC8-212ENST00000421523 LCTP09848 1927 aa6.69□□□□□ -1.34
HDAC8-212ENST00000421523 HECTD1Q9ULT8 2610 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 MYH4Q9Y623 1939 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 GSG1L2A8MUP6 293 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 SLC30A4O14863 429 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 SMARCA5O60264 1052 aaPredicted RBP6.68□□□□□ -1.34
HDAC8-212ENST00000421523 NDUFB10O96000 172 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 DCNP07585 359 aaKnown RBP6.68□□□□□ -1.34
HDAC8-212ENST00000421523 WEE2P0C1S8 567 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 SRGAP2BP0DMP2 458 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 ATXN8OSP0DMR3 200 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 ALAS1P13196 640 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 PTK7Q13308 1070 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 SBK1Q52WX2 424 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 N4BP2L1Q5TBK1 243 aaPredicted RBP6.68□□□□□ -1.34
HDAC8-212ENST00000421523 ANKRD54Q6NXT1 300 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 SYCE2Q6PIF2 218 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 NSMFQ6X4W1 530 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 SESTD1Q86VW0 696 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 OSBP2Q969R2 916 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 PLVAPQ9BX97 442 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 LRRCC1Q9C099 1032 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 CHMP4BQ9H444 224 aaKnown RBP6.68□□□□□ -1.34
HDAC8-212ENST00000421523 MRPL42Q9Y6G3 142 aaKnown RBP6.68□□□□□ -1.34
HDAC8-212ENST00000421523 PLXNA4Q9HCM2 1894 aa6.68□□□□□ -1.34
HDAC8-212ENST00000421523 CACNA1IQ9P0X4 2223 aa6.67□□□□□ -1.34
HDAC8-212ENST00000421523 IGKV6D-41A0A0C4DH26 115 aa6.67□□□□□ -1.34
HDAC8-212ENST00000421523 POTEMA6NI47 508 aa6.67□□□□□ -1.34
HDAC8-212ENST00000421523 CFHP08603 1231 aa6.67□□□□□ -1.34
HDAC8-212ENST00000421523 ZNF286BP0CG31 522 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms