RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PTK2Q05397 1052 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 PPP2R3AQ06190 1150 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 ZNF569Q5MCW4 686 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 SIRT2Q8IXJ6 389 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 USP28Q96RU2 1077 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 POLR3EQ9NVU0 708 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 DNAI1Q9UI46 699 aa11.75□□□□□ -0.53
PTCH1-206ENST00000421141 PLEKHA8P1O95397 391 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 HADHQ16836 314 aaKnown RBP11.74□□□□□ -0.53
PTCH1-206ENST00000421141 ARL6IP4Q66PJ3 421 aaKnown RBP11.74□□□□□ -0.53
PTCH1-206ENST00000421141 ATG9AQ7Z3C6 839 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 CAPZA3Q96KX2 299 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 FAM207AQ9NSI2 230 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-206ENST00000421141 PLA2G4BP0C869 781 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 ORC2Q13416 577 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-206ENST00000421141 KRBA2Q6ZNG9 492 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-206ENST00000421141 RRAGAQ7L523 313 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 MTA3Q9BTC8 594 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 GBA2Q9HCG7 927 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-206ENST00000421141 MYO1AQ9UBC5 1043 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 SLU7O95391 586 aaKnown RBP11.74□□□□□ -0.53
PTCH1-206ENST00000421141 MAPK6Q16659 721 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 ZBTB33Q86T24 672 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 MXD3Q9BW11 206 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 NMT2O60551 498 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 NR2F2P24468 414 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 CDC42EP1Q00587 391 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 C12orf60Q5U649 245 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 CCDC25Q86WR0 208 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 NSUN7Q8NE18 718 aaKnown RBP11.74□□□□□ -0.53
PTCH1-206ENST00000421141 JPH1Q9HDC5 661 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-206ENST00000421141 RGPD2P0DJD1 1756 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 C1orf228Q6PIY5 440 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 STK36Q9NRP7 1315 aa11.74□□□□□ -0.53
PTCH1-206ENST00000421141 SETD1AO15047 1707 aaKnown RBP11.73□□□□□ -0.53
PTCH1-206ENST00000421141 GSG1L2A8MUP6 293 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 LDHAP00338 332 aaKnown RBP11.73□□□□□ -0.53
PTCH1-206ENST00000421141 MFAP3P55082 362 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 FBXO33Q7Z6M2 555 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 FAM20AQ96MK3 541 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 C2orf40Q9H1Z8 148 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 CUL4BQ13620 913 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 PAIP2Q9BPZ3 127 aaKnown RBP11.73□□□□□ -0.53
PTCH1-206ENST00000421141 TFRCP02786 760 aaKnown RBP11.73□□□□□ -0.53
PTCH1-206ENST00000421141 CIITAP33076 1130 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 PSMD2Q13200 908 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 ARMCX2Q7L311 632 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 TMTC1Q8IUR5 882 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 RAB3IL1Q8TBN0 382 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 CPT1AP50416 773 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 DSTYKQ6XUX3 929 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 ZNF365Q70YC5 407 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 MAIP1Q8WWC4 291 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 NT5C1BQ96P26 610 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 LY9Q9HBG7 655 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 SLC8A2Q9UPR5 921 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 STK25O00506 426 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 EXOC3L4Q17RC7 722 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 RNF180Q86T96 592 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 CLIC6Q96NY7 704 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 BARHL2Q9NY43 387 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 PIK3C2AO00443 1686 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 NDUFA8P51970 172 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 ARPP19P56211 112 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 NR5A1Q13285 461 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 SLC39A14Q15043 492 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 C16orf86Q6ZW13 317 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 NEDD1Q8NHV4 660 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 NEK9Q8TD19 979 aa11.73□□□□□ -0.53
PTCH1-206ENST00000421141 SCYL2Q6P3W7 929 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 PSPC1Q8WXF1 523 aaKnown RBP11.72□□□□□ -0.53
PTCH1-206ENST00000421141 FEZ2Q9UHY8 353 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-206ENST00000421141 RGL2O15211 777 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 ACTN4O43707 911 aaKnown RBP11.72□□□□□ -0.53
PTCH1-206ENST00000421141 PPP1R2P3Q6NXS1 205 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 TBC1D10CQ8IV04 446 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 MSTO1Q9BUK6 570 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 RHPN2Q8IUC4 686 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 RASEFQ8IZ41 740 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 SLITRK6Q9H5Y7 841 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 A6NJR5 290 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 CLDN3O15551 220 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 AKR1B1P15121 316 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 OSTNP61366 133 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 GOLGA8FQ08AF8 430 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 GOLGA8DPQ0D2H9 430 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 NECTIN1Q15223 517 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 SLC10A5Q5PT55 438 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 LDHDQ86WU2 507 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 TDRD7Q8NHU6 1098 aaKnown RBP11.72□□□□□ -0.53
PTCH1-206ENST00000421141 GCOM2Q9BZD3 368 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-206ENST00000421141 ZNF609O15014 1411 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 IPO5O00410 1097 aaKnown RBP11.72□□□□□ -0.53
PTCH1-206ENST00000421141 ALDH1A1P00352 501 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 PLCG1P19174 1290 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 SKIV2LQ15477 1246 aaKnown RBP11.72□□□□□ -0.53
PTCH1-206ENST00000421141 GPC2Q8N158 579 aa11.72□□□□□ -0.53
PTCH1-206ENST00000421141 DHTKD1Q96HY7 919 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-206ENST00000421141 PRAMEF18Q5VWM3 479 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms