RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 SPATA33Q96N06 139 aa16.42■□□□□ 0.22
PTPN18-204ENST00000420717 KIF3AQ9Y496 699 aa16.42■□□□□ 0.22
PTPN18-204ENST00000420717 CEP290O15078 2479 aa16.42■□□□□ 0.22
PTPN18-204ENST00000420717 GRIN2DO15399 1336 aa16.42■□□□□ 0.22
PTPN18-204ENST00000420717 HAS3O00219 553 aa16.41■□□□□ 0.22
PTPN18-204ENST00000420717 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
PTPN18-204ENST00000420717 TRIM29Q14134 588 aa16.41■□□□□ 0.22
PTPN18-204ENST00000420717 Q4G0T1 1027 aa16.41■□□□□ 0.22
PTPN18-204ENST00000420717 SESTD1Q86VW0 696 aa16.41■□□□□ 0.22
PTPN18-204ENST00000420717 DIS3L2Q8IYB7 885 aaKnown RBP16.41■□□□□ 0.22
PTPN18-204ENST00000420717 KAT2BQ92831 832 aa16.41■□□□□ 0.22
PTPN18-204ENST00000420717 FERMT2Q96AC1 680 aa16.41■□□□□ 0.22
PTPN18-204ENST00000420717 C8orf76Q96K31 380 aa16.41■□□□□ 0.22
PTPN18-204ENST00000420717 GPR20Q99678 358 aa16.41■□□□□ 0.22
PTPN18-204ENST00000420717 CCDC194A0A1B0GVG4 234 aa16.4■□□□□ 0.22
PTPN18-204ENST00000420717 ARVCFO00192 962 aa16.4■□□□□ 0.22
PTPN18-204ENST00000420717 DHX15O43143 795 aaKnown RBP16.4■□□□□ 0.22
PTPN18-204ENST00000420717 ARP10275 920 aa16.4■□□□□ 0.22
PTPN18-204ENST00000420717 GCFC2P16383 781 aaKnown RBP16.4■□□□□ 0.22
PTPN18-204ENST00000420717 PTPN11Q06124 597 aaPredicted RBP16.4■□□□□ 0.22
PTPN18-204ENST00000420717 NR5A1Q13285 461 aa16.4■□□□□ 0.22
PTPN18-204ENST00000420717 ITGB3BPQ13352 177 aaPredicted RBP16.4■□□□□ 0.22
PTPN18-204ENST00000420717 TRIM60Q495X7 471 aa16.4■□□□□ 0.22
PTPN18-204ENST00000420717 PPP4R3AQ6IN85 833 aa16.4■□□□□ 0.22
PTPN18-204ENST00000420717 CYFIP1Q7L576 1253 aa16.4■□□□□ 0.22
PTPN18-204ENST00000420717 PLA2G4DQ86XP0 818 aa16.4■□□□□ 0.22
PTPN18-204ENST00000420717 NAP1L4Q99733 375 aaKnown RBP16.4■□□□□ 0.22
PTPN18-204ENST00000420717 FOXP1Q9H334 677 aaPredicted RBP16.4■□□□□ 0.22
PTPN18-204ENST00000420717 BCAS3Q9H6U6 928 aa16.4■□□□□ 0.22
PTPN18-204ENST00000420717 MLXIPQ9HAP2 919 aa16.4■□□□□ 0.22
PTPN18-204ENST00000420717 JPH1Q9HDC5 661 aaPredicted RBP16.4■□□□□ 0.22
PTPN18-204ENST00000420717 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.4■□□□□ 0.22
PTPN18-204ENST00000420717 EMSYQ7Z589 1322 aa16.4■□□□□ 0.22
PTPN18-204ENST00000420717 EVI5O60447 810 aa16.39■□□□□ 0.21
PTPN18-204ENST00000420717 ZNF76P36508 570 aa16.39■□□□□ 0.21
PTPN18-204ENST00000420717 ITGA7Q13683 1181 aa16.39■□□□□ 0.21
PTPN18-204ENST00000420717 INF2Q27J81 1249 aa16.39■□□□□ 0.21
PTPN18-204ENST00000420717 EARS2Q5JPH6 523 aaKnown RBP16.39■□□□□ 0.21
PTPN18-204ENST00000420717 NFRKBQ6P4R8 1299 aa16.39■□□□□ 0.21
PTPN18-204ENST00000420717 NEK8Q86SG6 692 aa16.39■□□□□ 0.21
PTPN18-204ENST00000420717 FAM126BQ8IXS8 530 aa16.39■□□□□ 0.21
PTPN18-204ENST00000420717 FAM184AQ8NB25 1140 aa16.39■□□□□ 0.21
PTPN18-204ENST00000420717 INTS4Q96HW7 963 aaKnown RBP16.39■□□□□ 0.21
PTPN18-204ENST00000420717 C16orf70Q9BSU1 422 aa16.39■□□□□ 0.21
PTPN18-204ENST00000420717 KATNAL1Q9BW62 490 aa16.39■□□□□ 0.21
PTPN18-204ENST00000420717 TBC1D22BQ9NU19 505 aa16.39■□□□□ 0.21
PTPN18-204ENST00000420717 NR2E3Q9Y5X4 410 aa16.39■□□□□ 0.21
PTPN18-204ENST00000420717 WDR81Q562E7 1941 aa16.39■□□□□ 0.21
PTPN18-204ENST00000420717 BTBD18B2RXH4 712 aa16.38■□□□□ 0.21
PTPN18-204ENST00000420717 K7ELQ4 463 aaPredicted RBP16.38■□□□□ 0.21
PTPN18-204ENST00000420717 IPO5O00410 1097 aaKnown RBP16.38■□□□□ 0.21
PTPN18-204ENST00000420717 NOP56O00567 594 aaKnown RBP16.38■□□□□ 0.21
PTPN18-204ENST00000420717 ATG7O95352 703 aa16.38■□□□□ 0.21
PTPN18-204ENST00000420717 CD4P01730 458 aa16.38■□□□□ 0.21
PTPN18-204ENST00000420717 LGALS2P05162 132 aa16.38■□□□□ 0.21
PTPN18-204ENST00000420717 MYL3P08590 195 aa16.38■□□□□ 0.21
PTPN18-204ENST00000420717 HOXC8P31273 242 aa16.38■□□□□ 0.21
PTPN18-204ENST00000420717 ATN1P54259 1190 aaPredicted RBP16.38■□□□□ 0.21
PTPN18-204ENST00000420717 SLC5A5Q92911 643 aa16.38■□□□□ 0.21
PTPN18-204ENST00000420717 RIT2Q99578 217 aa16.38■□□□□ 0.21
PTPN18-204ENST00000420717 SDF4Q9BRK5 362 aa16.38■□□□□ 0.21
PTPN18-204ENST00000420717 SLC9A2Q9UBY0 812 aa16.38■□□□□ 0.21
PTPN18-204ENST00000420717 GSTTP1A0A1W2PQM5 241 aa16.37■□□□□ 0.21
PTPN18-204ENST00000420717 LGR5O75473 907 aa16.37■□□□□ 0.21
PTPN18-204ENST00000420717 TDP2O95551 362 aa16.37■□□□□ 0.21
PTPN18-204ENST00000420717 U2AF2P26368 475 aaKnown RBP eCLIP16.37■□□□□ 0.21
PTPN18-204ENST00000420717 GJB2P29033 226 aa16.37■□□□□ 0.21
PTPN18-204ENST00000420717 TLE2Q04725 743 aa16.37■□□□□ 0.21
PTPN18-204ENST00000420717 ORC2Q13416 577 aaPredicted RBP16.37■□□□□ 0.21
PTPN18-204ENST00000420717 SAFBQ15424 915 aaKnown RBP eCLIP16.37■□□□□ 0.21
PTPN18-204ENST00000420717 PRR16Q569H4 304 aa16.37■□□□□ 0.21
PTPN18-204ENST00000420717 B3GNT9Q6UX72 402 aa16.37■□□□□ 0.21
PTPN18-204ENST00000420717 PIK3AP1Q6ZUJ8 805 aa16.37■□□□□ 0.21
PTPN18-204ENST00000420717 ETNPPLQ8TBG4 499 aa16.37■□□□□ 0.21
PTPN18-204ENST00000420717 DPF3Q92784 378 aa16.37■□□□□ 0.21
PTPN18-204ENST00000420717 ZNF577Q9BSK1 485 aa16.37■□□□□ 0.21
PTPN18-204ENST00000420717 KCNMB3Q9NPA1 279 aa16.37■□□□□ 0.21
PTPN18-204ENST00000420717 PDLIM7Q9NR12 457 aa16.37■□□□□ 0.21
PTPN18-204ENST00000420717 TBX21Q9UL17 535 aa16.37■□□□□ 0.21
PTPN18-204ENST00000420717 TANC1Q9C0D5 1861 aa16.37■□□□□ 0.21
PTPN18-204ENST00000420717 IGKV6D-21A0A0A0MT36 114 aa16.36■□□□□ 0.21
PTPN18-204ENST00000420717 FAM205CA6NFA0 338 aa16.36■□□□□ 0.21
PTPN18-204ENST00000420717 KIAA0355O15063 1070 aa16.36■□□□□ 0.21
PTPN18-204ENST00000420717 TBX3O15119 743 aa16.36■□□□□ 0.21
PTPN18-204ENST00000420717 MSH4O15457 936 aa16.36■□□□□ 0.21
PTPN18-204ENST00000420717 ZNF286BP0CG31 522 aa16.36■□□□□ 0.21
PTPN18-204ENST00000420717 PSMC6P62333 389 aa16.36■□□□□ 0.21
PTPN18-204ENST00000420717 KRT76Q01546 638 aa16.36■□□□□ 0.21
PTPN18-204ENST00000420717 FAAP100Q0VG06 881 aa16.36■□□□□ 0.21
PTPN18-204ENST00000420717 NBPF20Q3BBV1 942 aa16.36■□□□□ 0.21
PTPN18-204ENST00000420717 PRPF38BQ5VTL8 546 aaKnown RBP16.36■□□□□ 0.21
PTPN18-204ENST00000420717 ZNF746Q6NUN9 644 aaPredicted RBP16.36■□□□□ 0.21
PTPN18-204ENST00000420717 SMAP1Q8IYB5 467 aaPredicted RBP16.36■□□□□ 0.21
PTPN18-204ENST00000420717 C7orf61Q8IZ16 206 aa16.36■□□□□ 0.21
PTPN18-204ENST00000420717 SEPT1Q8WYJ6 367 aa16.36■□□□□ 0.21
PTPN18-204ENST00000420717 SMC3Q9UQE7 1217 aa16.36■□□□□ 0.21
PTPN18-204ENST00000420717 ATP11BQ9Y2G3 1177 aa16.36■□□□□ 0.21
PTPN18-204ENST00000420717 TELO2Q9Y4R8 837 aa16.36■□□□□ 0.21
PTPN18-204ENST00000420717 DCDC2CA8MYV0 355 aa16.35■□□□□ 0.21
PTPN18-204ENST00000420717 PSMD10O75832 226 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms