RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 GNAT1P11488 350 aa24.5■■□□□ 1.51
PTPN4-202ENST00000420482 FGD1P98174 961 aa24.5■■□□□ 1.51
PTPN4-202ENST00000420482 CNKSR3Q6P9H4 555 aa24.5■■□□□ 1.51
PTPN4-202ENST00000420482 APOA5Q6Q788 366 aa24.5■■□□□ 1.51
PTPN4-202ENST00000420482 HEATR3Q7Z4Q2 680 aa24.5■■□□□ 1.51
PTPN4-202ENST00000420482 RAB11FIP4Q86YS3 637 aa24.5■■□□□ 1.51
PTPN4-202ENST00000420482 CTAGE1Q96RT6 745 aa24.5■■□□□ 1.51
PTPN4-202ENST00000420482 ZBTB43O43298 467 aa24.49■■□□□ 1.51
PTPN4-202ENST00000420482 TJAP1Q5JTD0 557 aa24.49■■□□□ 1.51
PTPN4-202ENST00000420482 DHX38Q92620 1227 aaKnown RBP24.49■■□□□ 1.51
PTPN4-202ENST00000420482 GPRASP2Q96D09 838 aa24.49■■□□□ 1.51
PTPN4-202ENST00000420482 EMSYQ7Z589 1322 aa24.49■■□□□ 1.51
PTPN4-202ENST00000420482 CHD7Q9P2D1 2997 aa24.49■■□□□ 1.51
PTPN4-202ENST00000420482 IGFBP4P22692 258 aa24.48■■□□□ 1.51
PTPN4-202ENST00000420482 EXOSC10Q01780 885 aaKnown RBP24.48■■□□□ 1.51
PTPN4-202ENST00000420482 RTN1Q16799 776 aa24.48■■□□□ 1.51
PTPN4-202ENST00000420482 ATP6V0A1Q93050 837 aa24.48■■□□□ 1.51
PTPN4-202ENST00000420482 hCG_1984214I3L0E3 225 aa24.47■■□□□ 1.51
PTPN4-202ENST00000420482 MAFGO15525 162 aa24.47■■□□□ 1.51
PTPN4-202ENST00000420482 CXCL10P02778 98 aa24.47■■□□□ 1.51
PTPN4-202ENST00000420482 IKBKEQ14164 716 aa24.47■■□□□ 1.51
PTPN4-202ENST00000420482 SERINC5Q86VE9 423 aa24.47■■□□□ 1.51
PTPN4-202ENST00000420482 SKAP1Q86WV1 359 aa24.47■■□□□ 1.51
PTPN4-202ENST00000420482 HERC6Q8IVU3 1022 aa24.47■■□□□ 1.51
PTPN4-202ENST00000420482 ZNF713Q8N859 430 aaPredicted RBP24.47■■□□□ 1.51
PTPN4-202ENST00000420482 GPR20Q99678 358 aa24.47■■□□□ 1.51
PTPN4-202ENST00000420482 NCOR1O75376 2440 aa24.46■■□□□ 1.51
PTPN4-202ENST00000420482 TRIP12Q14669 1992 aaPredicted RBP24.46■■□□□ 1.51
PTPN4-202ENST00000420482 ABHD14A-ACY1A0A1B0GW23 586 aa24.46■■□□□ 1.51
PTPN4-202ENST00000420482 CA3P07451 260 aa24.46■■□□□ 1.51
PTPN4-202ENST00000420482 SMIM10L2AP0DMW4 78 aa24.46■■□□□ 1.51
PTPN4-202ENST00000420482 SMIM10L2BP0DMW5 78 aa24.46■■□□□ 1.51
PTPN4-202ENST00000420482 RCAN1P53805 252 aa24.46■■□□□ 1.51
PTPN4-202ENST00000420482 ZNF618Q5T7W0 954 aa24.46■■□□□ 1.51
PTPN4-202ENST00000420482 PPP1R18Q6NYC8 613 aa24.46■■□□□ 1.51
PTPN4-202ENST00000420482 ZBED2Q9BTP6 218 aa24.46■■□□□ 1.51
PTPN4-202ENST00000420482 GLT8D2Q9H1C3 349 aa24.46■■□□□ 1.51
PTPN4-202ENST00000420482 CCDC196A0A1B0GTZ2 297 aa24.45■■□□□ 1.5
PTPN4-202ENST00000420482 hCG_1642624A0A1W2PR95 340 aa24.45■■□□□ 1.5
PTPN4-202ENST00000420482 GOLGA8AA7E2F4 631 aa24.45■■□□□ 1.5
PTPN4-202ENST00000420482 GOLGA8BA8MQT2 603 aa24.45■■□□□ 1.5
PTPN4-202ENST00000420482 CAND2O75155 1236 aa24.45■■□□□ 1.5
PTPN4-202ENST00000420482 MYOGP15173 224 aa24.45■■□□□ 1.5
PTPN4-202ENST00000420482 THPOP40225 353 aa24.45■■□□□ 1.5
PTPN4-202ENST00000420482 NAPAP54920 295 aa24.45■■□□□ 1.5
PTPN4-202ENST00000420482 SEMA3FQ13275 785 aa24.45■■□□□ 1.5
PTPN4-202ENST00000420482 MTMR1Q13613 665 aa24.45■■□□□ 1.5
PTPN4-202ENST00000420482 COL9A3Q14050 684 aaPredicted RBP24.45■■□□□ 1.5
PTPN4-202ENST00000420482 ADGRE1Q14246 886 aa24.45■■□□□ 1.5
PTPN4-202ENST00000420482 PRDM6Q9NQX0 595 aa24.45■■□□□ 1.5
PTPN4-202ENST00000420482 NAP1L2Q9ULW6 460 aaPredicted RBP24.45■■□□□ 1.5
PTPN4-202ENST00000420482 PCDHA6Q9UN73 950 aa24.45■■□□□ 1.5
PTPN4-202ENST00000420482 PCDHA8Q9Y5H6 950 aa24.45■■□□□ 1.5
PTPN4-202ENST00000420482 CNTNAP5Q8WYK1 1306 aa24.44■■□□□ 1.5
PTPN4-202ENST00000420482 KLF18A0A0U1RQI7 1052 aa24.44■■□□□ 1.5
PTPN4-202ENST00000420482 RSPH10B2B2RC85 870 aa24.44■■□□□ 1.5
PTPN4-202ENST00000420482 TLL1O43897 1013 aa24.44■■□□□ 1.5
PTPN4-202ENST00000420482 NBNO60934 754 aa24.44■■□□□ 1.5
PTPN4-202ENST00000420482 FOSP01100 380 aaPredicted RBP24.44■■□□□ 1.5
PTPN4-202ENST00000420482 RSPH10BP0C881 870 aa24.44■■□□□ 1.5
PTPN4-202ENST00000420482 WDR5P61964 334 aaKnown RBP24.44■■□□□ 1.5
PTPN4-202ENST00000420482 ZNF200P98182 395 aaPredicted RBP24.44■■□□□ 1.5
PTPN4-202ENST00000420482 SP4Q02446 784 aa24.44■■□□□ 1.5
PTPN4-202ENST00000420482 UBE2SQ16763 222 aa24.44■■□□□ 1.5
PTPN4-202ENST00000420482 TRIM71Q2Q1W2 868 aaKnown RBP24.44■■□□□ 1.5
PTPN4-202ENST00000420482 UTP14CQ5TAP6 766 aaKnown RBP24.44■■□□□ 1.5
PTPN4-202ENST00000420482 RASEFQ8IZ41 740 aa24.44■■□□□ 1.5
PTPN4-202ENST00000420482 PPM1EQ8WY54 764 aa24.44■■□□□ 1.5
PTPN4-202ENST00000420482 TSPYL2Q9H2G4 693 aaPredicted RBP24.44■■□□□ 1.5
PTPN4-202ENST00000420482 ADCK5Q3MIX3 580 aa24.43■■□□□ 1.5
PTPN4-202ENST00000420482 TCEANC2Q96MN5 208 aa24.43■■□□□ 1.5
PTPN4-202ENST00000420482 RNPEPQ9H4A4 650 aa24.43■■□□□ 1.5
PTPN4-202ENST00000420482 BCAS3Q9H6U6 928 aa24.43■■□□□ 1.5
PTPN4-202ENST00000420482 TRANK1O15050 2925 aa24.42■■□□□ 1.5
PTPN4-202ENST00000420482 PTPRSQ13332 1948 aa24.42■■□□□ 1.5
PTPN4-202ENST00000420482 GTPBP6O43824 516 aaPredicted RBP24.42■■□□□ 1.5
PTPN4-202ENST00000420482 LGR5O75473 907 aa24.42■■□□□ 1.5
PTPN4-202ENST00000420482 REC8O95072 547 aa24.42■■□□□ 1.5
PTPN4-202ENST00000420482 HOXC8P31273 242 aa24.42■■□□□ 1.5
PTPN4-202ENST00000420482 ADCY7P51828 1080 aa24.42■■□□□ 1.5
PTPN4-202ENST00000420482 GPNMBQ14956 572 aa24.42■■□□□ 1.5
PTPN4-202ENST00000420482 WWC2Q6AWC2 1192 aa24.42■■□□□ 1.5
PTPN4-202ENST00000420482 TET1Q8NFU7 2136 aa24.42■■□□□ 1.5
PTPN4-202ENST00000420482 SEPT1Q8WYJ6 367 aa24.42■■□□□ 1.5
PTPN4-202ENST00000420482 RIC8AQ9NPQ8 531 aa24.42■■□□□ 1.5
PTPN4-202ENST00000420482 JADE2Q9NQC1 790 aa24.42■■□□□ 1.5
PTPN4-202ENST00000420482 THEGQ9P2T0 379 aa24.42■■□□□ 1.5
PTPN4-202ENST00000420482 BRPF3Q9ULD4 1205 aa24.42■■□□□ 1.5
PTPN4-202ENST00000420482 UBIAD1Q9Y5Z9 338 aa24.42■■□□□ 1.5
PTPN4-202ENST00000420482 V9GY48 417 aaPredicted RBP24.42■■□□□ 1.5
PTPN4-202ENST00000420482 NRCAMQ92823 1304 aa24.41■■□□□ 1.5
PTPN4-202ENST00000420482 ITGB5P18084 799 aa24.41■■□□□ 1.5
PTPN4-202ENST00000420482 TCF7P36402 384 aaPredicted RBP24.41■■□□□ 1.5
PTPN4-202ENST00000420482 ATXN2LQ8WWM7 1075 aaKnown RBP24.41■■□□□ 1.5
PTPN4-202ENST00000420482 TNPO1Q92973 898 aaKnown RBP24.41■■□□□ 1.5
PTPN4-202ENST00000420482 MUC3AQ02505 3323 aa24.41■■□□□ 1.5
PTPN4-202ENST00000420482 TREHO43280 583 aa24.4■■□□□ 1.5
PTPN4-202ENST00000420482 KCNA2P16389 499 aa24.4■■□□□ 1.5
PTPN4-202ENST00000420482 METAP2P50579 478 aaKnown RBP eCLIP24.4■■□□□ 1.5
PTPN4-202ENST00000420482 BLOC1S2Q6QNY1 142 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms