RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 C6orf50Q9HD87 102 aa23.23■■□□□ 1.31
GTF3A-202ENST00000419181 ADAMTS3O15072 1205 aa23.22■■□□□ 1.31
GTF3A-202ENST00000419181 MAFGO15525 162 aa23.22■■□□□ 1.31
GTF3A-202ENST00000419181 GNA11P29992 359 aa23.22■■□□□ 1.31
GTF3A-202ENST00000419181 GDF6Q6KF10 455 aaPredicted RBP23.22■■□□□ 1.31
GTF3A-202ENST00000419181 C16orf59Q7L2K0 433 aa23.22■■□□□ 1.31
GTF3A-202ENST00000419181 REXO1Q8N1G1 1221 aaKnown RBP23.22■■□□□ 1.31
GTF3A-202ENST00000419181 CCDC148Q8NFR7 591 aa23.22■■□□□ 1.31
GTF3A-202ENST00000419181 CTAGE1Q96RT6 745 aa23.22■■□□□ 1.31
GTF3A-202ENST00000419181 MXRA8Q9BRK3 442 aa23.22■■□□□ 1.31
GTF3A-202ENST00000419181 GTF2IRD1Q9UHL9 959 aa23.22■■□□□ 1.31
GTF3A-202ENST00000419181 TPCN1Q9ULQ1 816 aa23.22■■□□□ 1.31
GTF3A-202ENST00000419181 TANC1Q9C0D5 1861 aa23.22■■□□□ 1.31
GTF3A-202ENST00000419181 LGALS2P05162 132 aa23.21■■□□□ 1.31
GTF3A-202ENST00000419181 AK2P54819 239 aa23.21■■□□□ 1.31
GTF3A-202ENST00000419181 SSRP1Q08945 709 aaKnown RBP23.21■■□□□ 1.31
GTF3A-202ENST00000419181 ANKRD1Q15327 319 aa23.21■■□□□ 1.31
GTF3A-202ENST00000419181 PTGISQ16647 500 aa23.21■■□□□ 1.31
GTF3A-202ENST00000419181 C8orf34Q49A92 452 aa23.21■■□□□ 1.31
GTF3A-202ENST00000419181 JAKMIP3Q5VZ66 844 aa23.21■■□□□ 1.31
GTF3A-202ENST00000419181 MCTP2Q6DN12 878 aa23.21■■□□□ 1.31
GTF3A-202ENST00000419181 GPR153Q6NV75 609 aa23.21■■□□□ 1.31
GTF3A-202ENST00000419181 CPLX2Q6PUV4 134 aaKnown RBP23.21■■□□□ 1.31
GTF3A-202ENST00000419181 C7orf31Q8N865 590 aa23.21■■□□□ 1.31
GTF3A-202ENST00000419181 CRYGNQ8WXF5 182 aa23.21■■□□□ 1.31
GTF3A-202ENST00000419181 ALG1Q9BT22 464 aa23.21■■□□□ 1.31
GTF3A-202ENST00000419181 SH3GLB2Q9NR46 395 aa23.21■■□□□ 1.31
GTF3A-202ENST00000419181 VPS54Q9P1Q0 977 aa23.21■■□□□ 1.31
GTF3A-202ENST00000419181 HDAC6Q9UBN7 1215 aa23.21■■□□□ 1.31
GTF3A-202ENST00000419181 TELO2Q9Y4R8 837 aa23.21■■□□□ 1.31
GTF3A-202ENST00000419181 CCL23P55773 120 aa23.2■■□□□ 1.3
GTF3A-202ENST00000419181 ARHGAP4P98171 946 aa23.2■■□□□ 1.3
GTF3A-202ENST00000419181 SCRN1Q12765 414 aa23.2■■□□□ 1.3
GTF3A-202ENST00000419181 CEP55Q53EZ4 464 aa23.2■■□□□ 1.3
GTF3A-202ENST00000419181 CYP2W1Q8TAV3 490 aa23.2■■□□□ 1.3
GTF3A-202ENST00000419181 RNPC3Q96LT9 517 aaKnown RBP23.2■■□□□ 1.3
GTF3A-202ENST00000419181 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.2■■□□□ 1.3
GTF3A-202ENST00000419181 KCNH7Q9NS40 1196 aa23.2■■□□□ 1.3
GTF3A-202ENST00000419181 NOD1Q9Y239 953 aa23.2■■□□□ 1.3
GTF3A-202ENST00000419181 H3BRB1 525 aa23.19■■□□□ 1.3
GTF3A-202ENST00000419181 PITPNM1O00562 1244 aa23.19■■□□□ 1.3
GTF3A-202ENST00000419181 PFKFB2O60825 505 aa23.19■■□□□ 1.3
GTF3A-202ENST00000419181 DEXIO95424 95 aa23.19■■□□□ 1.3
GTF3A-202ENST00000419181 SP4Q02446 784 aa23.19■■□□□ 1.3
GTF3A-202ENST00000419181 TMEM240Q5SV17 173 aa23.19■■□□□ 1.3
GTF3A-202ENST00000419181 BICD2Q8TD16 824 aa23.19■■□□□ 1.3
GTF3A-202ENST00000419181 SLKQ9H2G2 1235 aaPredicted RBP23.19■■□□□ 1.3
GTF3A-202ENST00000419181 TUT1Q9H6E5 874 aaKnown RBP23.19■■□□□ 1.3
GTF3A-202ENST00000419181 IL23AQ9NPF7 189 aa23.19■■□□□ 1.3
GTF3A-202ENST00000419181 PKD2L1Q9P0L9 805 aa23.19■■□□□ 1.3
GTF3A-202ENST00000419181 MEIS1O00470 390 aa23.18■■□□□ 1.3
GTF3A-202ENST00000419181 ACRP10323 421 aa23.18■■□□□ 1.3
GTF3A-202ENST00000419181 PSRC1Q6PGN9 363 aaPredicted RBP23.18■■□□□ 1.3
GTF3A-202ENST00000419181 DEFB123Q8N688 67 aa23.18■■□□□ 1.3
GTF3A-202ENST00000419181 SCN5AQ14524 2016 aa23.18■■□□□ 1.3
GTF3A-202ENST00000419181 TRIP12Q14669 1992 aaPredicted RBP23.18■■□□□ 1.3
GTF3A-202ENST00000419181 CDKL5O76039 1030 aa23.17■■□□□ 1.3
GTF3A-202ENST00000419181 CYP3A4P08684 503 aa23.17■■□□□ 1.3
GTF3A-202ENST00000419181 ARP10275 920 aa23.17■■□□□ 1.3
GTF3A-202ENST00000419181 NIPA1Q7RTP0 329 aa23.17■■□□□ 1.3
GTF3A-202ENST00000419181 TRIM50Q86XT4 487 aa23.17■■□□□ 1.3
GTF3A-202ENST00000419181 RASGRP4Q8TDF6 673 aa23.17■■□□□ 1.3
GTF3A-202ENST00000419181 VWCEQ96DN2 955 aa23.17■■□□□ 1.3
GTF3A-202ENST00000419181 SCLYQ96I15 445 aa23.17■■□□□ 1.3
GTF3A-202ENST00000419181 FAM86B1E9PN63 330 aa23.16■■□□□ 1.3
GTF3A-202ENST00000419181 FAM86B2P0C5J1 330 aa23.16■■□□□ 1.3
GTF3A-202ENST00000419181 HOXC8P31273 242 aa23.16■■□□□ 1.3
GTF3A-202ENST00000419181 TCF7P36402 384 aaPredicted RBP23.16■■□□□ 1.3
GTF3A-202ENST00000419181 NEK4P51957 841 aa23.16■■□□□ 1.3
GTF3A-202ENST00000419181 RBL2Q08999 1139 aa23.16■■□□□ 1.3
GTF3A-202ENST00000419181 BFSP2Q13515 415 aa23.16■■□□□ 1.3
GTF3A-202ENST00000419181 HIC1Q14526 733 aa23.16■■□□□ 1.3
GTF3A-202ENST00000419181 RASIP1Q5U651 963 aa23.16■■□□□ 1.3
GTF3A-202ENST00000419181 ZNF365Q70YC5 407 aa23.16■■□□□ 1.3
GTF3A-202ENST00000419181 Q7L0L9 218 aa23.16■■□□□ 1.3
GTF3A-202ENST00000419181 CAGE1Q8TC20 777 aa23.16■■□□□ 1.3
GTF3A-202ENST00000419181 DHX38Q92620 1227 aaKnown RBP23.16■■□□□ 1.3
GTF3A-202ENST00000419181 JPH1Q9HDC5 661 aaPredicted RBP23.16■■□□□ 1.3
GTF3A-202ENST00000419181 NFASCO94856 1347 aa23.15■■□□□ 1.3
GTF3A-202ENST00000419181 STK36Q9NRP7 1315 aa23.15■■□□□ 1.3
GTF3A-202ENST00000419181 IGLV3-22A0A075B6J6 115 aa23.15■■□□□ 1.3
GTF3A-202ENST00000419181 GSTTP1A0A1W2PQM5 241 aa23.15■■□□□ 1.3
GTF3A-202ENST00000419181 ZNF76P36508 570 aa23.15■■□□□ 1.3
GTF3A-202ENST00000419181 NLRP5P59047 1200 aa23.15■■□□□ 1.3
GTF3A-202ENST00000419181 UTP14CQ5TAP6 766 aaKnown RBP23.15■■□□□ 1.3
GTF3A-202ENST00000419181 FAM177A1Q8N128 213 aaPredicted RBP23.15■■□□□ 1.3
GTF3A-202ENST00000419181 CCDC155Q8N6L0 562 aa23.15■■□□□ 1.3
GTF3A-202ENST00000419181 SEPT1Q8WYJ6 367 aa23.15■■□□□ 1.3
GTF3A-202ENST00000419181 AIFM3Q96NN9 605 aa23.15■■□□□ 1.3
GTF3A-202ENST00000419181 AGO4Q9HCK5 861 aaKnown RBP23.15■■□□□ 1.3
GTF3A-202ENST00000419181 ZNF215Q9UL58 517 aaPredicted RBP23.15■■□□□ 1.3
GTF3A-202ENST00000419181 IQCF3P0C7M6 154 aa23.14■■□□□ 1.29
GTF3A-202ENST00000419181 SMIM10L2AP0DMW4 78 aa23.14■■□□□ 1.29
GTF3A-202ENST00000419181 SMIM10L2BP0DMW5 78 aa23.14■■□□□ 1.29
GTF3A-202ENST00000419181 SMAD3P84022 425 aaKnown RBP23.14■■□□□ 1.29
GTF3A-202ENST00000419181 ZNF200P98182 395 aaPredicted RBP23.14■■□□□ 1.29
GTF3A-202ENST00000419181 PTK7Q13308 1070 aa23.14■■□□□ 1.29
GTF3A-202ENST00000419181 ITGB3BPQ13352 177 aaPredicted RBP23.14■■□□□ 1.29
GTF3A-202ENST00000419181 ME3Q16798 604 aa23.14■■□□□ 1.29
GTF3A-202ENST00000419181 RETREG2Q8NC44 543 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms